Definition Pseudomonas syringae pv. syringae B728a, complete genome.
Accession NC_007005
Length 6,093,698

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The map label for this gene is ydfP [C]

Identifier: 66046002

GI number: 66046002

Start: 3352726

End: 3353253

Strand: Reverse

Name: ydfP [C]

Synonym: Psyr_2766

Alternate gene names: 66046002

Gene position: 3353253-3352726 (Counterclockwise)

Preceding gene: 66046003

Following gene: 66046001

Centisome position: 55.03

GC content: 64.96

Gene sequence:

>528_bases
GTGAAGGCCCTGCCGTGGAGGGCTTTGGGCCTGCTGCTGATCCTGCTGGCGCTGGCCGGCGCGTTGTACGGGGCATACCG
GCAAGGCGTGACCGTCACCGATCTGGCCTGGAAGGCGAAGTGGGCCGAGCAGATCAGCACCCAATCCGAGGCGGTGGCCA
CCACGACCACCGAGTACCGAACCGAAGAGCAACGCCGCCAGAAAGCGGCCAACCAGGTGGCAAACGATGCAAGACAAGAA
CAGACCGCTGCGCTTACTGATGCTGCTGTCGCTGACGCTGCTGGCGACCGGCTGCGTGTCGAAGCCAAAAAGCTGGCAGC
CGCCACCAGTTGCGCCCCCGGCGATACCGGCGCTGCCGAACGAGGCAAGGCAGCCAGCCGCGCCGCCATGGTGCTCTCCG
AACTGCTCAGCCGGGCTGACGCGCGAGCGGGAGAGCTGGCAAAGGCTTATGACGAATCCCGAATAGCCGGCTTGGCGTGT
AACCGCTTTGTTGATGCGCTCCCCAAGCCCCTGATTACCTCCGAGTAA

Upstream 100 bases:

>100_bases
ACAAGGGCGATTTCCTGACGATCACCCGTCGCATCAATGGCGGCACGAACGGACTGGCTGATCGGCAGGCGCTGTACGCC
CGAGCGCTTGAGGTGCTGGC

Downstream 100 bases:

>100_bases
CGGAACAATAAAATGGCAAATACCCAGCTGATTCAAAAATACATGGGCCAGACGATGCTGATCATCAAGGCGAACGGCGG
CAGCGTGACCGTCGAAAAGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MKALPWRALGLLLILLALAGALYGAYRQGVTVTDLAWKAKWAEQISTQSEAVATTTTEYRTEEQRRQKAANQVANDARQE
QTAALTDAAVADAAGDRLRVEAKKLAAATSCAPGDTGAAERGKAASRAAMVLSELLSRADARAGELAKAYDESRIAGLAC
NRFVDALPKPLITSE

Sequences:

>Translated_175_residues
MKALPWRALGLLLILLALAGALYGAYRQGVTVTDLAWKAKWAEQISTQSEAVATTTTEYRTEEQRRQKAANQVANDARQE
QTAALTDAAVADAAGDRLRVEAKKLAAATSCAPGDTGAAERGKAASRAAMVLSELLSRADARAGELAKAYDESRIAGLAC
NRFVDALPKPLITSE
>Mature_175_residues
MKALPWRALGLLLILLALAGALYGAYRQGVTVTDLAWKAKWAEQISTQSEAVATTTTEYRTEEQRRQKAANQVANDARQE
QTAALTDAAVADAAGDRLRVEAKKLAAATSCAPGDTGAAERGKAASRAAMVLSELLSRADARAGELAKAYDESRIAGLAC
NRFVDALPKPLITSE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18531; Mature: 18531

Theoretical pI: Translated: 8.70; Mature: 8.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKALPWRALGLLLILLALAGALYGAYRQGVTVTDLAWKAKWAEQISTQSEAVATTTTEYR
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TEEQRRQKAANQVANDARQEQTAALTDAAVADAAGDRLRVEAKKLAAATSCAPGDTGAAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCHH
RGKAASRAAMVLSELLSRADARAGELAKAYDESRIAGLACNRFVDALPKPLITSE
CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MKALPWRALGLLLILLALAGALYGAYRQGVTVTDLAWKAKWAEQISTQSEAVATTTTEYR
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TEEQRRQKAANQVANDARQEQTAALTDAAVADAAGDRLRVEAKKLAAATSCAPGDTGAAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCHH
RGKAASRAAMVLSELLSRADARAGELAKAYDESRIAGLACNRFVDALPKPLITSE
CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA