| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is ydfP [C]
Identifier: 66046002
GI number: 66046002
Start: 3352726
End: 3353253
Strand: Reverse
Name: ydfP [C]
Synonym: Psyr_2766
Alternate gene names: 66046002
Gene position: 3353253-3352726 (Counterclockwise)
Preceding gene: 66046003
Following gene: 66046001
Centisome position: 55.03
GC content: 64.96
Gene sequence:
>528_bases GTGAAGGCCCTGCCGTGGAGGGCTTTGGGCCTGCTGCTGATCCTGCTGGCGCTGGCCGGCGCGTTGTACGGGGCATACCG GCAAGGCGTGACCGTCACCGATCTGGCCTGGAAGGCGAAGTGGGCCGAGCAGATCAGCACCCAATCCGAGGCGGTGGCCA CCACGACCACCGAGTACCGAACCGAAGAGCAACGCCGCCAGAAAGCGGCCAACCAGGTGGCAAACGATGCAAGACAAGAA CAGACCGCTGCGCTTACTGATGCTGCTGTCGCTGACGCTGCTGGCGACCGGCTGCGTGTCGAAGCCAAAAAGCTGGCAGC CGCCACCAGTTGCGCCCCCGGCGATACCGGCGCTGCCGAACGAGGCAAGGCAGCCAGCCGCGCCGCCATGGTGCTCTCCG AACTGCTCAGCCGGGCTGACGCGCGAGCGGGAGAGCTGGCAAAGGCTTATGACGAATCCCGAATAGCCGGCTTGGCGTGT AACCGCTTTGTTGATGCGCTCCCCAAGCCCCTGATTACCTCCGAGTAA
Upstream 100 bases:
>100_bases ACAAGGGCGATTTCCTGACGATCACCCGTCGCATCAATGGCGGCACGAACGGACTGGCTGATCGGCAGGCGCTGTACGCC CGAGCGCTTGAGGTGCTGGC
Downstream 100 bases:
>100_bases CGGAACAATAAAATGGCAAATACCCAGCTGATTCAAAAATACATGGGCCAGACGATGCTGATCATCAAGGCGAACGGCGG CAGCGTGACCGTCGAAAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 175; Mature: 175
Protein sequence:
>175_residues MKALPWRALGLLLILLALAGALYGAYRQGVTVTDLAWKAKWAEQISTQSEAVATTTTEYRTEEQRRQKAANQVANDARQE QTAALTDAAVADAAGDRLRVEAKKLAAATSCAPGDTGAAERGKAASRAAMVLSELLSRADARAGELAKAYDESRIAGLAC NRFVDALPKPLITSE
Sequences:
>Translated_175_residues MKALPWRALGLLLILLALAGALYGAYRQGVTVTDLAWKAKWAEQISTQSEAVATTTTEYRTEEQRRQKAANQVANDARQE QTAALTDAAVADAAGDRLRVEAKKLAAATSCAPGDTGAAERGKAASRAAMVLSELLSRADARAGELAKAYDESRIAGLAC NRFVDALPKPLITSE >Mature_175_residues MKALPWRALGLLLILLALAGALYGAYRQGVTVTDLAWKAKWAEQISTQSEAVATTTTEYRTEEQRRQKAANQVANDARQE QTAALTDAAVADAAGDRLRVEAKKLAAATSCAPGDTGAAERGKAASRAAMVLSELLSRADARAGELAKAYDESRIAGLAC NRFVDALPKPLITSE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18531; Mature: 18531
Theoretical pI: Translated: 8.70; Mature: 8.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKALPWRALGLLLILLALAGALYGAYRQGVTVTDLAWKAKWAEQISTQSEAVATTTTEYR CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TEEQRRQKAANQVANDARQEQTAALTDAAVADAAGDRLRVEAKKLAAATSCAPGDTGAAE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCHH RGKAASRAAMVLSELLSRADARAGELAKAYDESRIAGLACNRFVDALPKPLITSE CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MKALPWRALGLLLILLALAGALYGAYRQGVTVTDLAWKAKWAEQISTQSEAVATTTTEYR CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TEEQRRQKAANQVANDARQEQTAALTDAAVADAAGDRLRVEAKKLAAATSCAPGDTGAAE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCHH RGKAASRAAMVLSELLSRADARAGELAKAYDESRIAGLACNRFVDALPKPLITSE CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA