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The map label for this gene is 66045995

Identifier: 66045995

GI number: 66045995

Start: 3346803

End: 3347873

Strand: Direct

Name: 66045995

Synonym: Psyr_2759

Alternate gene names: NA

Gene position: 3346803-3347873 (Clockwise)

Preceding gene: 66045994

Following gene: 66045996

Centisome position: 54.92

GC content: 60.22

Gene sequence:

>1071_bases
ATGCCTGACTCGACTGCCATCAGCCAGCCCGCCAGTGAACTGCATTACGTAGACGACACTCAACCGGGTCTTACGCGCAA
GGTACTGCGCGGCAAATTCGCGTACTTTGACACCAAGGGTCAGCGCATCAAGGACGAGTCGGAGATCAAGCGCATCAACG
CACTGGCAGTCCCGCCCGCCTACACCGAAGTGTGGATCTGTGCCGATCCGCTGGGCCACCTGCAGGCCACCGGCCGCGAT
GCCCGCGGGCGCAAGCAGTATCGCTACCATCCGCGCTGGCGCGAAATACGTGATCAGGACAAATACTCGCGGCTGATCGA
GTTCGGCCATGCGCTGCCCAAAGTGCGCAAGCAGATCGAAGCACAGCTCGCTCAGCCGGGCATGGGCCGGGAAAAAGTCA
TGGCGACGGTCATTTCATTGCTGGACGCAACACTGATCCGCATCGGCAACAGCCAGTACACCAAGGAAAACCGCTCGTAC
GGCCTGACCACCCTGCGCAACAAGCACGTCGAAGTCAAAGGCGGCCAGATCCTCTTCGAGTTCCGCGGCAAGAGCGGCGT
CGAGCATAAAGTCAGCGTCAAGGATCGACGTCTGGCCAACGTGATCAAACGCTGCATGGAACTGCCCGGACAAAACCTCT
TCCAGTACCTGGACGAAGACGGCGTACGCCACGCGGTGACCTCTTCCGACATCAATGCCTACCTGCAAAGCCTCACCGGC
TCGGACTTCACCGCCAAGGACTACCGAACCTGGGCTGCCAGTGCGCTGGCACTGGCAACGCTGCAAAAACTGCACTGGGA
GCCAGAGGCCGACGCCAAACGGCACATCGTCGACATGGTCAAGGCAGTCTCGAAACAACTGGGCAATACCCCCGCCATCT
GCCGAAAATGCTACATCCACCCGGCGGTTCTGGAAGGCTTCCTGCTCGGCAACCTGGCCAAACTCCCCCGCTCCCGACAA
CGCAAAGGCCTGCGCCTGGAAGAAGTTGCCCTGGCGAGCTACCTGCGAATACTGGCTGACAAGGTCGAGGCCGTGGTGAA
CGATACGGTGGTGAAAGACAGCAAAGCCTGA

Upstream 100 bases:

>100_bases
TGCTGGCCTGACCTTTCGAAAAAAACAGCCACGCAGCAAATAAACGGCACCACCGTAAAAGCCCGAGGTCAGTGTTTTTA
ACTGCCTTTGGAACTTAGCC

Downstream 100 bases:

>100_bases
GCCGCCTGACCATGGCACGTCAGCCTTTGCACCAATAAAATTTCGTAGCCTCATGATTTGCCAAGCATTTCTGACGGGCA
AAAAAGCAGCGTCTTGTACC

Product: DNA topoisomerase I

Products: NA

Alternate protein names: DNA poisomerase I; DNA poisomerase Type I; DNA poisomerase IB; Type I poisomerase; DNA poisomerase I Protein; Poisomerase IB; Poisomerase IB-Like Protein; DNA poisomerase I-Like Protein; Viral-Like DNA poisomerase; DNA poisomerase ; Eukaryotic-Like DNA poisomerase I; DNA poisomerasei; -Like DNA poisomerase I; Type I DNA poisomerase

Number of amino acids: Translated: 356; Mature: 355

Protein sequence:

>356_residues
MPDSTAISQPASELHYVDDTQPGLTRKVLRGKFAYFDTKGQRIKDESEIKRINALAVPPAYTEVWICADPLGHLQATGRD
ARGRKQYRYHPRWREIRDQDKYSRLIEFGHALPKVRKQIEAQLAQPGMGREKVMATVISLLDATLIRIGNSQYTKENRSY
GLTTLRNKHVEVKGGQILFEFRGKSGVEHKVSVKDRRLANVIKRCMELPGQNLFQYLDEDGVRHAVTSSDINAYLQSLTG
SDFTAKDYRTWAASALALATLQKLHWEPEADAKRHIVDMVKAVSKQLGNTPAICRKCYIHPAVLEGFLLGNLAKLPRSRQ
RKGLRLEEVALASYLRILADKVEAVVNDTVVKDSKA

Sequences:

>Translated_356_residues
MPDSTAISQPASELHYVDDTQPGLTRKVLRGKFAYFDTKGQRIKDESEIKRINALAVPPAYTEVWICADPLGHLQATGRD
ARGRKQYRYHPRWREIRDQDKYSRLIEFGHALPKVRKQIEAQLAQPGMGREKVMATVISLLDATLIRIGNSQYTKENRSY
GLTTLRNKHVEVKGGQILFEFRGKSGVEHKVSVKDRRLANVIKRCMELPGQNLFQYLDEDGVRHAVTSSDINAYLQSLTG
SDFTAKDYRTWAASALALATLQKLHWEPEADAKRHIVDMVKAVSKQLGNTPAICRKCYIHPAVLEGFLLGNLAKLPRSRQ
RKGLRLEEVALASYLRILADKVEAVVNDTVVKDSKA
>Mature_355_residues
PDSTAISQPASELHYVDDTQPGLTRKVLRGKFAYFDTKGQRIKDESEIKRINALAVPPAYTEVWICADPLGHLQATGRDA
RGRKQYRYHPRWREIRDQDKYSRLIEFGHALPKVRKQIEAQLAQPGMGREKVMATVISLLDATLIRIGNSQYTKENRSYG
LTTLRNKHVEVKGGQILFEFRGKSGVEHKVSVKDRRLANVIKRCMELPGQNLFQYLDEDGVRHAVTSSDINAYLQSLTGS
DFTAKDYRTWAASALALATLQKLHWEPEADAKRHIVDMVKAVSKQLGNTPAICRKCYIHPAVLEGFLLGNLAKLPRSRQR
KGLRLEEVALASYLRILADKVEAVVNDTVVKDSKA

Specific function: Unknown

COG id: COG3569

COG function: function code L; Topoisomerase IB

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40190; Mature: 40058

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDSTAISQPASELHYVDDTQPGLTRKVLRGKFAYFDTKGQRIKDESEIKRINALAVPPA
CCCCCCCCCCHHHCCCCCCCCCCHHHHHHHCHHHEECCCCCCCCCHHHHHHHHHEECCCC
YTEVWICADPLGHLQATGRDARGRKQYRYHPRWREIRDQDKYSRLIEFGHALPKVRKQIE
CCEEEEECCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQLAQPGMGREKVMATVISLLDATLIRIGNSQYTKENRSYGLTTLRNKHVEVKGGQILFE
HHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCHHHCCCEEEEECCEEEEE
FRGKSGVEHKVSVKDRRLANVIKRCMELPGQNLFQYLDEDGVRHAVTSSDINAYLQSLTG
ECCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC
SDFTAKDYRTWAASALALATLQKLHWEPEADAKRHIVDMVKAVSKQLGNTPAICRKCYIH
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCC
PAVLEGFLLGNLAKLPRSRQRKGLRLEEVALASYLRILADKVEAVVNDTVVKDSKA
HHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
PDSTAISQPASELHYVDDTQPGLTRKVLRGKFAYFDTKGQRIKDESEIKRINALAVPPA
CCCCCCCCCHHHCCCCCCCCCCHHHHHHHCHHHEECCCCCCCCCHHHHHHHHHEECCCC
YTEVWICADPLGHLQATGRDARGRKQYRYHPRWREIRDQDKYSRLIEFGHALPKVRKQIE
CCEEEEECCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQLAQPGMGREKVMATVISLLDATLIRIGNSQYTKENRSYGLTTLRNKHVEVKGGQILFE
HHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCHHHCCCEEEEECCEEEEE
FRGKSGVEHKVSVKDRRLANVIKRCMELPGQNLFQYLDEDGVRHAVTSSDINAYLQSLTG
ECCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC
SDFTAKDYRTWAASALALATLQKLHWEPEADAKRHIVDMVKAVSKQLGNTPAICRKCYIH
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCC
PAVLEGFLLGNLAKLPRSRQRKGLRLEEVALASYLRILADKVEAVVNDTVVKDSKA
HHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA