| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66045991
Identifier: 66045991
GI number: 66045991
Start: 3342992
End: 3344071
Strand: Direct
Name: 66045991
Synonym: Psyr_2755
Alternate gene names: NA
Gene position: 3342992-3344071 (Clockwise)
Preceding gene: 66045988
Following gene: 66045992
Centisome position: 54.86
GC content: 63.15
Gene sequence:
>1080_bases ATGAGTCAATGGCCAGATAGCCGCATCACTGAACTGTTTGCCGTCGAACTGCCGCTGTTGCAAGCCCCCATGGCGGGCGC CAGCGGATCGCAGATGGCCATTGCTGTGGCTCAGGCTGGCGGCTTGGGGGCATTGCCCTGCGCCATGCTCACCCCTGAGA AAATCGAACAGGAAGTAGCGACTTTCAGGCAGCAGACCGGTAACGCTCCGCTGAACCTGAATTTCTTCTGCCATCAGCCT CCGGCCCACGATGCCGAGCGCGCCGAACGCTGGAAGCAGTCGCTCAAGCCCTATTACGAGGAATTGGGTGCCGATTTCGA TGCGCCGACACCAGTCTCCAACCGCGCGCCCTTCGACAGCGACAGCTGCACATTGATCGAGCGCTTGAGGCCGGAAGTGG TGAGTTTCCATTTCGGCCTTCCGCAGCCATCGTTACTGGATCGGGTCCGGGCCACGGGTGCAAAGATCATCTCGTCAGCC ACCACGGTCGAGGAAGCGATCTGGCTGGAGCAACACGGCTGCGACGCGGTGATTGCCATGGGCTACGAAGCAGGCGGCCA TCGGGGGCTGTTCCTCAGCGATCAACTGCACACCCAGGTCGGCACCTTTGCGCTGGTCCCGCAGATCGCTGACGCGACAA GCATCCCGGTCATCGCCGCAGGTGGTATCGCGGACGGTCGCGGTGTAGCGGCGGCATTTATCCTGGGCGCTTCGGGGGTA CAGGTCGGGACAGCGTATCTGTTCTGCCCGGAAGCCAGCGTCAGTGCCCTGCACCGTCAGGCGCTGCACGATGCAACGGG CAGCCAGACCGCTCTGACCAACCTCTTCACCGGGCGTCCGGCGCGAGGCATCGTCAACCGGATCATGCGCGAAGCCGGCC CCATCAGCCCGCTCACCCCGGCGTTTCCGCTGGCGGGCGGCGCCTTGATGCCGCTGCGCGCGCAGGCGGAAAAACTGGGC AGCAGTGACTTCGTGAACCTCTGGGCGGGCCAGGCAGTCGGTATCAAACATCGACTGGGAGCCACCGAACTGACGCGGCA ACTGGCTGAAAATGCGCTGAAAATTCTGTCTCCGCGATAA
Upstream 100 bases:
>100_bases CGAGTGGCCCTGCCGGCTTGTCGACGCTCGACGTGGCGTTTGCCATTCCCGCCATTCGCGCGCTCAATGAGCATTGCCTG AATGCCTGCCGGAGAAACAC
Downstream 100 bases:
>100_bases AACAGTGCTTTCAGAACAACAGGCTGACGCTATATATTTATCTATATAACGAAACGCCCTTACCCCGATGGCGTGCGTTT TCATCATCAAGGAGCTGTTT
Product: 2-nitropropane dioxygenase, NPD
Products: NA
Alternate protein names: Nitroalkane oxidase [H]
Number of amino acids: Translated: 359; Mature: 358
Protein sequence:
>359_residues MSQWPDSRITELFAVELPLLQAPMAGASGSQMAIAVAQAGGLGALPCAMLTPEKIEQEVATFRQQTGNAPLNLNFFCHQP PAHDAERAERWKQSLKPYYEELGADFDAPTPVSNRAPFDSDSCTLIERLRPEVVSFHFGLPQPSLLDRVRATGAKIISSA TTVEEAIWLEQHGCDAVIAMGYEAGGHRGLFLSDQLHTQVGTFALVPQIADATSIPVIAAGGIADGRGVAAAFILGASGV QVGTAYLFCPEASVSALHRQALHDATGSQTALTNLFTGRPARGIVNRIMREAGPISPLTPAFPLAGGALMPLRAQAEKLG SSDFVNLWAGQAVGIKHRLGATELTRQLAENALKILSPR
Sequences:
>Translated_359_residues MSQWPDSRITELFAVELPLLQAPMAGASGSQMAIAVAQAGGLGALPCAMLTPEKIEQEVATFRQQTGNAPLNLNFFCHQP PAHDAERAERWKQSLKPYYEELGADFDAPTPVSNRAPFDSDSCTLIERLRPEVVSFHFGLPQPSLLDRVRATGAKIISSA TTVEEAIWLEQHGCDAVIAMGYEAGGHRGLFLSDQLHTQVGTFALVPQIADATSIPVIAAGGIADGRGVAAAFILGASGV QVGTAYLFCPEASVSALHRQALHDATGSQTALTNLFTGRPARGIVNRIMREAGPISPLTPAFPLAGGALMPLRAQAEKLG SSDFVNLWAGQAVGIKHRLGATELTRQLAENALKILSPR >Mature_358_residues SQWPDSRITELFAVELPLLQAPMAGASGSQMAIAVAQAGGLGALPCAMLTPEKIEQEVATFRQQTGNAPLNLNFFCHQPP AHDAERAERWKQSLKPYYEELGADFDAPTPVSNRAPFDSDSCTLIERLRPEVVSFHFGLPQPSLLDRVRATGAKIISSAT TVEEAIWLEQHGCDAVIAMGYEAGGHRGLFLSDQLHTQVGTFALVPQIADATSIPVIAAGGIADGRGVAAAFILGASGVQ VGTAYLFCPEASVSALHRQALHDATGSQTALTNLFTGRPARGIVNRIMREAGPISPLTPAFPLAGGALMPLRAQAEKLGS SDFVNLWAGQAVGIKHRLGATELTRQLAENALKILSPR
Specific function: Catalyzes the oxidation of alkyl nitronates to produce the corresponding carbonyl compounds and nitrites [H]
COG id: COG2070
COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nitronate monooxygenase family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6322609, Length=304, Percent_Identity=32.2368421052632, Blast_Score=135, Evalue=7e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004136 - InterPro: IPR013785 [H]
Pfam domain/function: PF03060 NPD [H]
EC number: =1.13.12.16 [H]
Molecular weight: Translated: 38046; Mature: 37915
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQWPDSRITELFAVELPLLQAPMAGASGSQMAIAVAQAGGLGALPCAMLTPEKIEQEVA CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCHHHCCHHHHHHHHH TFRQQTGNAPLNLNFFCHQPPAHDAERAERWKQSLKPYYEELGADFDAPTPVSNRAPFDS HHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC DSCTLIERLRPEVVSFHFGLPQPSLLDRVRATGAKIISSATTVEEAIWLEQHGCDAVIAM CCHHHHHHHCHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE GYEAGGHRGLFLSDQLHTQVGTFALVPQIADATSIPVIAAGGIADGRGVAAAFILGASGV CCCCCCCCCEEECHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHCCCCC QVGTAYLFCPEASVSALHRQALHDATGSQTALTNLFTGRPARGIVNRIMREAGPISPLTP EECEEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCC AFPLAGGALMPLRAQAEKLGSSDFVNLWAGQAVGIKHRLGATELTRQLAENALKILSPR CCCCCCCCCCCHHHHHHHCCCCCHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SQWPDSRITELFAVELPLLQAPMAGASGSQMAIAVAQAGGLGALPCAMLTPEKIEQEVA CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCHHHCCHHHHHHHHH TFRQQTGNAPLNLNFFCHQPPAHDAERAERWKQSLKPYYEELGADFDAPTPVSNRAPFDS HHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC DSCTLIERLRPEVVSFHFGLPQPSLLDRVRATGAKIISSATTVEEAIWLEQHGCDAVIAM CCHHHHHHHCHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE GYEAGGHRGLFLSDQLHTQVGTFALVPQIADATSIPVIAAGGIADGRGVAAAFILGASGV CCCCCCCCCEEECHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHCCCCC QVGTAYLFCPEASVSALHRQALHDATGSQTALTNLFTGRPARGIVNRIMREAGPISPLTP EECEEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCC AFPLAGGALMPLRAQAEKLGSSDFVNLWAGQAVGIKHRLGATELTRQLAENALKILSPR CCCCCCCCCCCHHHHHHHCCCCCHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA