| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is estB [H]
Identifier: 66045977
GI number: 66045977
Start: 3326933
End: 3328123
Strand: Reverse
Name: estB [H]
Synonym: Psyr_2741
Alternate gene names: 66045977
Gene position: 3328123-3326933 (Counterclockwise)
Preceding gene: 66045978
Following gene: 66045975
Centisome position: 54.62
GC content: 65.16
Gene sequence:
>1191_bases ATGGCTGTCCTGAACGAGGCGGGGATACAGCGTCTTGACCATGTCTGGCGCAGTTTCGTCGAGCAGGGTCGGATCGTCGG TGGCGTGCTGTTGCTGGCTCGGCATGGGCGTCTGGAATACGCCAGTGCGCGCGGCTGGGCCGATCGTGAACAGCAGATTC CGGTCACCCGCCGCACGCGTTTTCGTCTGGCCTCACTGACCAAGCTGTTGACCTCGGTCGCGGTGTTGCGGCTCTGCGAA CGGGGTGTGCTGGATCTGCACGCTTCGGTGACGCACTGGCTGCCAGCCTTTCGACCGCATCTGGCCAATGGCCGCGAGCC GCTCATCACGCTGCAGCACCTGCTGTCACACGCGTCGGGCTTGAGCTACGGCTTTGAGCAAGCGCCCGATAACGCTTATC AGCGCGCTGGGGTGTCGGACGGGCTGGATCGCGTACCGTTCGACCTGCAGGAAAACCTGAGGCGTTTGGCGCGTGTGCCC TTGCTGTTTGAGCCCGGCAGCGCCTGGGGGTACTCGCTGGCCACGGATGTATTGGGTGCAGTGATCGAACAGGCCACGGG GCTGGCGTTGTCAGAAGCCATCGATAAATGGGTCACCGTGCCTCTGCGCATGCATGCGACCTCATTCAGGCACCTGCCGG AATGTCCGCTGGCCAGCGCCTACAAGGATGGGGTCAGTGGCCCGCAGCGTATCGGCGATGACGATGGGGTGTTGCTCGAC AGCGGCCGGGCGCGGCTGTCCGCAGCCCGCGCCTTTGACTCATGCGCGTATGAGTCGGGCGGGGCGGGAATGCTCGGCAC GGCTGATGACTATCTGCGGCTGCTCGAATGCCTGCGTCTCGGCGGCGCGCCGCTATTGAGTGAAGCCGGTACCGCACGCT TGCTGGGCAATGCGATCGGCCAGACGATCATCGCCAGCCGCGGGCCCGGCTGGAGGTTCGGGCTGGGGCCGATGATCCTT ATCGATCCAGTGCTTGCCGGGCAGCGGCAGGGGGCGGGAACCTGGTCGTGGTGCGGCCTGTATGGCAGTCATTATTGGGT CGATCCGCGTGCTGCGCTGAGCATGGTGGTCCTGACCAACACGGCGGTTGCCGGCGCGTGGGGCGAGTTTGCCGACGCAA TCGTCGATGCGCTTTACCCCAAGCTGGGGGTCAGGCCCGGGCAAATTGCTTGCGGTAGCTGCTCGGGCTGA
Upstream 100 bases:
>100_bases GATGGCTTTCGCCGATGGCTGCTCGCACACCAACCCGATTCGCCATTCGGCGCAGGCCTACGCGCAGATCTTCAGCCGTG CAGTGAGGGGCGAGTGAACC
Downstream 100 bases:
>100_bases TGCCCACCAGATTGCGGAAGTGCCGGCGAAACGACTCTTCGGAGCCGAAGCCGGCGCGGTCCACCACTTCATTCAGGCGC AATTTCGACGATTCCAGCAG
Product: Beta-lactamase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 396; Mature: 395
Protein sequence:
>396_residues MAVLNEAGIQRLDHVWRSFVEQGRIVGGVLLLARHGRLEYASARGWADREQQIPVTRRTRFRLASLTKLLTSVAVLRLCE RGVLDLHASVTHWLPAFRPHLANGREPLITLQHLLSHASGLSYGFEQAPDNAYQRAGVSDGLDRVPFDLQENLRRLARVP LLFEPGSAWGYSLATDVLGAVIEQATGLALSEAIDKWVTVPLRMHATSFRHLPECPLASAYKDGVSGPQRIGDDDGVLLD SGRARLSAARAFDSCAYESGGAGMLGTADDYLRLLECLRLGGAPLLSEAGTARLLGNAIGQTIIASRGPGWRFGLGPMIL IDPVLAGQRQGAGTWSWCGLYGSHYWVDPRAALSMVVLTNTAVAGAWGEFADAIVDALYPKLGVRPGQIACGSCSG
Sequences:
>Translated_396_residues MAVLNEAGIQRLDHVWRSFVEQGRIVGGVLLLARHGRLEYASARGWADREQQIPVTRRTRFRLASLTKLLTSVAVLRLCE RGVLDLHASVTHWLPAFRPHLANGREPLITLQHLLSHASGLSYGFEQAPDNAYQRAGVSDGLDRVPFDLQENLRRLARVP LLFEPGSAWGYSLATDVLGAVIEQATGLALSEAIDKWVTVPLRMHATSFRHLPECPLASAYKDGVSGPQRIGDDDGVLLD SGRARLSAARAFDSCAYESGGAGMLGTADDYLRLLECLRLGGAPLLSEAGTARLLGNAIGQTIIASRGPGWRFGLGPMIL IDPVLAGQRQGAGTWSWCGLYGSHYWVDPRAALSMVVLTNTAVAGAWGEFADAIVDALYPKLGVRPGQIACGSCSG >Mature_395_residues AVLNEAGIQRLDHVWRSFVEQGRIVGGVLLLARHGRLEYASARGWADREQQIPVTRRTRFRLASLTKLLTSVAVLRLCER GVLDLHASVTHWLPAFRPHLANGREPLITLQHLLSHASGLSYGFEQAPDNAYQRAGVSDGLDRVPFDLQENLRRLARVPL LFEPGSAWGYSLATDVLGAVIEQATGLALSEAIDKWVTVPLRMHATSFRHLPECPLASAYKDGVSGPQRIGDDDGVLLDS GRARLSAARAFDSCAYESGGAGMLGTADDYLRLLECLRLGGAPLLSEAGTARLLGNAIGQTIIASRGPGWRFGLGPMILI DPVLAGQRQGAGTWSWCGLYGSHYWVDPRAALSMVVLTNTAVAGAWGEFADAIVDALYPKLGVRPGQIACGSCSG
Specific function: Acts on short-chain (C4-C6) fatty acid esters and triglycerides, including tertiary alcohol esters. Activity on p- nitrophenyl esters is generally higher than on o-nitrophenyl esters. Lacks beta-lactamase activity; it hydrolyzes the ester bond of cephalos
COG id: COG1680
COG function: function code V; Beta-lactamase class C and other penicillin binding proteins
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-A beta-lactamase family [H]
Homologues:
Organism=Escherichia coli, GI87082101, Length=384, Percent_Identity=25.78125, Blast_Score=72, Evalue=8e-14, Organism=Caenorhabditis elegans, GI17550934, Length=203, Percent_Identity=27.5862068965517, Blast_Score=72, Evalue=6e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012338 - InterPro: IPR001466 - InterPro: IPR000871 [H]
Pfam domain/function: PF00144 Beta-lactamase [H]
EC number: NA
Molecular weight: Translated: 42609; Mature: 42478
Theoretical pI: Translated: 7.84; Mature: 7.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVLNEAGIQRLDHVWRSFVEQGRIVGGVLLLARHGRLEYASARGWADREQQIPVTRRTR CCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEHHCCCCCCHHHCCCCHHHHH FRLASLTKLLTSVAVLRLCERGVLDLHASVTHWLPAFRPHLANGREPLITLQHLLSHASG HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC LSYGFEQAPDNAYQRAGVSDGLDRVPFDLQENLRRLARVPLLFEPGSAWGYSLATDVLGA CCCCCCCCCCHHHHHCCCCCCHHCCCHHHHHHHHHHHHCCEEECCCCCCCHHHHHHHHHH VIEQATGLALSEAIDKWVTVPLRMHATSFRHLPECPLASAYKDGVSGPQRIGDDDGVLLD HHHHHHCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHCCCCHHHCCCCCCEEEC SGRARLSAARAFDSCAYESGGAGMLGTADDYLRLLECLRLGGAPLLSEAGTARLLGNAIG CCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHH QTIIASRGPGWRFGLGPMILIDPVLAGQRQGAGTWSWCGLYGSHYWVDPRAALSMVVLTN HHHHHCCCCCCEECCCCHHEECHHHHCCCCCCCCCHHHHHCCCCEEECHHHHHHHHHHHC TAVAGAWGEFADAIVDALYPKLGVRPGQIACGSCSG CHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure AVLNEAGIQRLDHVWRSFVEQGRIVGGVLLLARHGRLEYASARGWADREQQIPVTRRTR CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEHHCCCCCCHHHCCCCHHHHH FRLASLTKLLTSVAVLRLCERGVLDLHASVTHWLPAFRPHLANGREPLITLQHLLSHASG HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC LSYGFEQAPDNAYQRAGVSDGLDRVPFDLQENLRRLARVPLLFEPGSAWGYSLATDVLGA CCCCCCCCCCHHHHHCCCCCCHHCCCHHHHHHHHHHHHCCEEECCCCCCCHHHHHHHHHH VIEQATGLALSEAIDKWVTVPLRMHATSFRHLPECPLASAYKDGVSGPQRIGDDDGVLLD HHHHHHCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHCCCCHHHCCCCCCEEEC SGRARLSAARAFDSCAYESGGAGMLGTADDYLRLLECLRLGGAPLLSEAGTARLLGNAIG CCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHH QTIIASRGPGWRFGLGPMILIDPVLAGQRQGAGTWSWCGLYGSHYWVDPRAALSMVVLTN HHHHHCCCCCCEECCCCHHEECHHHHCCCCCCCCCHHHHHCCCCEEECHHHHHHHHHHHC TAVAGAWGEFADAIVDALYPKLGVRPGQIACGSCSG CHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11472796; 11847270 [H]