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The map label for this gene is tdcA [C]

Identifier: 66045974

GI number: 66045974

Start: 3324746

End: 3325069

Strand: Reverse

Name: tdcA [C]

Synonym: Psyr_2738

Alternate gene names: 66045974

Gene position: 3325069-3324746 (Counterclockwise)

Preceding gene: 66045975

Following gene: 66045973

Centisome position: 54.57

GC content: 53.4

Gene sequence:

>324_bases
TTGCAAAACCAGAGTGCAGGACACATGAAAACCCACTTCTTCAAAGTCGTTCAAACCGTCGCACAGCACGGTTCGTTCTC
CGAGGCCGCCGCCATTCTGGGCTGCAGCCAGTCGAACATCAGCTATGCGATCAAGGAAGTCGAAGATTTTTTCGAAAAAC
GCCTGTTCATTCGCAGCCGCACAGGCTGCACGCTTACCCCTGAAGGCAAGGTCATCAGCCAGACCCTGGGAAATATCATG
GCCACGCTCGAACAACTAAAAAAAATGGGGTCAGTGGCAGCGTCACCATTCATTACCACTCGCACATCCGCGAGACCGGC
CTGA

Upstream 100 bases:

>100_bases
ACATTCATTCGAACAGCCGATAAACCGGCCAGCTCGGTGTTTCGGCGGGGGTTTCCTGTATTCCCGAGCCTTTGGCTCAG
CGGCAGGGCCGCACCCACCT

Downstream 100 bases:

>100_bases
GCGCTTCGCTGGACTTTCTCGCCCATCATTACCCCGATATCCACCTGAACGTGCTGCACCGCAGCGAACAGCATCCGTCG
CTGGACGCATTGATAAAGGG

Product: regulatory protein, LysR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 107; Mature: 107

Protein sequence:

>107_residues
MQNQSAGHMKTHFFKVVQTVAQHGSFSEAAAILGCSQSNISYAIKEVEDFFEKRLFIRSRTGCTLTPEGKVISQTLGNIM
ATLEQLKKMGSVAASPFITTRTSARPA

Sequences:

>Translated_107_residues
MQNQSAGHMKTHFFKVVQTVAQHGSFSEAAAILGCSQSNISYAIKEVEDFFEKRLFIRSRTGCTLTPEGKVISQTLGNIM
ATLEQLKKMGSVAASPFITTRTSARPA
>Mature_107_residues
MQNQSAGHMKTHFFKVVQTVAQHGSFSEAAAILGCSQSNISYAIKEVEDFFEKRLFIRSRTGCTLTPEGKVISQTLGNIM
ATLEQLKKMGSVAASPFITTRTSARPA

Specific function: Transcriptional Activator For The Tdcabcde Operon. [C]

COG id: COG0583

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11669; Mature: 11669

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNQSAGHMKTHFFKVVQTVAQHGSFSEAAAILGCSQSNISYAIKEVEDFFEKRLFIRSR
CCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCC
TGCTLTPEGKVISQTLGNIMATLEQLKKMGSVAASPFITTRTSARPA
CCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCC
>Mature Secondary Structure
MQNQSAGHMKTHFFKVVQTVAQHGSFSEAAAILGCSQSNISYAIKEVEDFFEKRLFIRSR
CCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCC
TGCTLTPEGKVISQTLGNIMATLEQLKKMGSVAASPFITTRTSARPA
CCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA