| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66045972
Identifier: 66045972
GI number: 66045972
Start: 3321952
End: 3324015
Strand: Reverse
Name: 66045972
Synonym: Psyr_2736
Alternate gene names: NA
Gene position: 3324015-3321952 (Counterclockwise)
Preceding gene: 66045973
Following gene: 66045970
Centisome position: 54.55
GC content: 61.97
Gene sequence:
>2064_bases ATGACGATACCGGACAAGCAGTACGTGGAATGGCTGGTCGAGCAATCGATGCTGAACGCCGCAAGACAGCGCGCCAAGAC CTATTCGGGGCAGGGCAGGCTCTGGCAGCGTCCTTTCGCCCTTGCACGTCCCAGAGATGCCTCCGCTATCGCCTCGGTCT GGTTCACCGCCTACCCGGCCTCCATCGTCACCCGCGAAGGCGGCTCGGTGCTCGAAGCGCTGGGTGATGAAACGCTGTGG CATGCACTGTCGGAGATCGGCATTCAGGGCATTCACAACGGGCCGCTGAAGCTGTCCGGCGGACTGCAGGGGCGCGAACG CACGCCGAGTATCGATGGCAACTTCGACCGCATCAGTTTCGGCATCGACCCGGACCTGGGTACCGAAGCGCAACTGTTGA GCCTGACGCGCATTGCCGCAGCGCACAACGCGGTGATCATCGACGACATCATCCCGTCGCACACCGGCAAGGGCGCAGAC TTCCGCCTGGCCGAGATGGCGTACGAGGATTACCCCGGCCTGTTCCACATGGTCGAGATCCGTGAGGAAGACTGGCAGCT GTTGCCTGAAGTGCCAGCGGGTCGCGATGCGGTCAACCTGATGCCCGATGTGGTGGATCAGCTGCGCGACAAGCACTACA TCGTCGGTCAGTTGCAGCGGGTGATTTTCTTCGAGCCCGGGGTCAAGGAAACCGACTGGAGCGCCACCGACGTGGTACAG GGCGTCGACGGCAAGGCCCGTCGCTGGGTTTACCTGCATTACTTCAAGGACGGCCAGCCGTCCCTGAACTGGCTGGACCC CAGCTTCGCCGCGCAGCAGATGATCATCGGTGACGCGCTGCATGCCATCGATGTCATGGGCGCCCGGGTGTTGCGCCTGG ACGCCAACGGTTTCCTTGGCGTCGAACGTCGCGCCGAAGGCACCGCCTGGTCGGAAAGCCATCCGCTGTCGATCACCGGC AACCAGCTTCTGGCCGGCGCGATCCGCAAGGCCGGCGGCTTCAGCTTCCAGGAACTGAACCTGACCATCGATGACATTGC CTCCATGGGGCAGGGTGGCGCGGATCTGTCCTACGACTTCATTACCCGGCCGGCCTATCAGCACGCGCTGCTTACCGGCA CCACCGAGTTCCTGCGCCTGATGCTGCGTCAGGTGCATGCCTATGGCATCGATCCGGCGTCATTGATCCATGCCTTGCAG AACCATGATGAGCTGACCCTGGAACTGGTGCACTTCTGGACGCTGCACGCCCACGACACCTTCCATTACCAGGGCCAGAC GTTCCCGGGCAACATCCTGCGTGAACACATTCGTGAGGAAATGTACGAGAAGCTGTCCGGCGAACACGCGCCGTACAACC TCAAGTTCGTCACCAACGGCGTCTCCTGCACCACGGCGAGCATCATCACTGCAGCGCTGGGCATTCGTGACCTGAGCACC ATTACCGATGCCGACATTCAGCAGATCCAGCACATTCACCTGCTGCTGGTGATGTACAACGCCATGCAGCCGGGCGTGTT TGCCTTGTCTGGCTGGGACCTTGTCGGTGCCCTGACGCTGCCGGCCGAGCAGGTCGACCACCTGATGCAGGATGGCGACA CACGCTGGGTTCACCGCGGCGCCTACGATCTGGTTGATCTCGACCCGGAAGCCGAGTTTTCTGCCGGTGACATGCCGCGT CCCAAGACGTTGTACGGCAGCCTGGTCACTCAGCTCCAGCGTCCAGATTCGTTTGCCTCGCAGCTCAAGAAGATTCTCGC TGTGCGCCGCGCCTATGACATCGCGGCAAGCCGTCAGATTCTGATTCCTGATGTCGAGCATCCAGGGCTGCTGGTCATGG TCCATGAGCTGCCGGCCGGCAAGGGCACGCAGATCACTGCGCTTAATTTCAGCGCGGAGACGATCGTCGAAACGCTGCAG TTGCCTGGCATTGCGCCGGGTCCGGTGGTTGACATCATCAACGAGCGTGTTGAAGGCGATCTGACCGAGCAGGGCGAGTT CACCATCACCCTCGATGCCTACGAAGGGCTGGCTCTGCGTGTGGTCAGCGCCTTGCCACTCTGA
Upstream 100 bases:
>100_bases CGAATCGGGCCGGCAAGGCTCATATCCGTAAGCAATACATTCAGGACGCTCCGCACGCGGGGCGTCTCAGGTCGCCGATT CGAGAGGAAGACTGAACGCT
Downstream 100 bases:
>100_bases GGTGTCACGCGCAGCCGGACTGGCTGCGCGTGAAACCGAATCAGGCTGTTCAGGGCTGACGCTTTTTCAGGCGGTAGGCA AACTGGGCGCGGCTCAGGCC
Product: glycosidase, putative
Products: NA
Alternate protein names: Glycosidase
Number of amino acids: Translated: 687; Mature: 686
Protein sequence:
>687_residues MTIPDKQYVEWLVEQSMLNAARQRAKTYSGQGRLWQRPFALARPRDASAIASVWFTAYPASIVTREGGSVLEALGDETLW HALSEIGIQGIHNGPLKLSGGLQGRERTPSIDGNFDRISFGIDPDLGTEAQLLSLTRIAAAHNAVIIDDIIPSHTGKGAD FRLAEMAYEDYPGLFHMVEIREEDWQLLPEVPAGRDAVNLMPDVVDQLRDKHYIVGQLQRVIFFEPGVKETDWSATDVVQ GVDGKARRWVYLHYFKDGQPSLNWLDPSFAAQQMIIGDALHAIDVMGARVLRLDANGFLGVERRAEGTAWSESHPLSITG NQLLAGAIRKAGGFSFQELNLTIDDIASMGQGGADLSYDFITRPAYQHALLTGTTEFLRLMLRQVHAYGIDPASLIHALQ NHDELTLELVHFWTLHAHDTFHYQGQTFPGNILREHIREEMYEKLSGEHAPYNLKFVTNGVSCTTASIITAALGIRDLST ITDADIQQIQHIHLLLVMYNAMQPGVFALSGWDLVGALTLPAEQVDHLMQDGDTRWVHRGAYDLVDLDPEAEFSAGDMPR PKTLYGSLVTQLQRPDSFASQLKKILAVRRAYDIAASRQILIPDVEHPGLLVMVHELPAGKGTQITALNFSAETIVETLQ LPGIAPGPVVDIINERVEGDLTEQGEFTITLDAYEGLALRVVSALPL
Sequences:
>Translated_687_residues MTIPDKQYVEWLVEQSMLNAARQRAKTYSGQGRLWQRPFALARPRDASAIASVWFTAYPASIVTREGGSVLEALGDETLW HALSEIGIQGIHNGPLKLSGGLQGRERTPSIDGNFDRISFGIDPDLGTEAQLLSLTRIAAAHNAVIIDDIIPSHTGKGAD FRLAEMAYEDYPGLFHMVEIREEDWQLLPEVPAGRDAVNLMPDVVDQLRDKHYIVGQLQRVIFFEPGVKETDWSATDVVQ GVDGKARRWVYLHYFKDGQPSLNWLDPSFAAQQMIIGDALHAIDVMGARVLRLDANGFLGVERRAEGTAWSESHPLSITG NQLLAGAIRKAGGFSFQELNLTIDDIASMGQGGADLSYDFITRPAYQHALLTGTTEFLRLMLRQVHAYGIDPASLIHALQ NHDELTLELVHFWTLHAHDTFHYQGQTFPGNILREHIREEMYEKLSGEHAPYNLKFVTNGVSCTTASIITAALGIRDLST ITDADIQQIQHIHLLLVMYNAMQPGVFALSGWDLVGALTLPAEQVDHLMQDGDTRWVHRGAYDLVDLDPEAEFSAGDMPR PKTLYGSLVTQLQRPDSFASQLKKILAVRRAYDIAASRQILIPDVEHPGLLVMVHELPAGKGTQITALNFSAETIVETLQ LPGIAPGPVVDIINERVEGDLTEQGEFTITLDAYEGLALRVVSALPL >Mature_686_residues TIPDKQYVEWLVEQSMLNAARQRAKTYSGQGRLWQRPFALARPRDASAIASVWFTAYPASIVTREGGSVLEALGDETLWH ALSEIGIQGIHNGPLKLSGGLQGRERTPSIDGNFDRISFGIDPDLGTEAQLLSLTRIAAAHNAVIIDDIIPSHTGKGADF RLAEMAYEDYPGLFHMVEIREEDWQLLPEVPAGRDAVNLMPDVVDQLRDKHYIVGQLQRVIFFEPGVKETDWSATDVVQG VDGKARRWVYLHYFKDGQPSLNWLDPSFAAQQMIIGDALHAIDVMGARVLRLDANGFLGVERRAEGTAWSESHPLSITGN QLLAGAIRKAGGFSFQELNLTIDDIASMGQGGADLSYDFITRPAYQHALLTGTTEFLRLMLRQVHAYGIDPASLIHALQN HDELTLELVHFWTLHAHDTFHYQGQTFPGNILREHIREEMYEKLSGEHAPYNLKFVTNGVSCTTASIITAALGIRDLSTI TDADIQQIQHIHLLLVMYNAMQPGVFALSGWDLVGALTLPAEQVDHLMQDGDTRWVHRGAYDLVDLDPEAEFSAGDMPRP KTLYGSLVTQLQRPDSFASQLKKILAVRRAYDIAASRQILIPDVEHPGLLVMVHELPAGKGTQITALNFSAETIVETLQL PGIAPGPVVDIINERVEGDLTEQGEFTITLDAYEGLALRVVSALPL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 75930; Mature: 75799
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: PS00071 GAPDH
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIPDKQYVEWLVEQSMLNAARQRAKTYSGQGRLWQRPFALARPRDASAIASVWFTAYPA CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCHHCCCCCHHHHHHHHHHHCCH SIVTREGGSVLEALGDETLWHALSEIGIQGIHNGPLKLSGGLQGRERTPSIDGNFDRISF HEEECCCCHHHHHHCHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCEEEE GIDPDLGTEAQLLSLTRIAAAHNAVIIDDIIPSHTGKGADFRLAEMAYEDYPGLFHMVEI CCCCCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCEEHHHHHHHCCCCEEEEEEE REEDWQLLPEVPAGRDAVNLMPDVVDQLRDKHYIVGQLQRVIFFEPGVKETDWSATDVVQ CCCCHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHCEEEEECCCCCCCCCCHHHHHH GVDGKARRWVYLHYFKDGQPSLNWLDPSFAAQQMIIGDALHAIDVMGARVLRLDANGFLG CCCCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCEE VERRAEGTAWSESHPLSITGNQLLAGAIRKAGGFSFQELNLTIDDIASMGQGGADLSYDF ECCCCCCCCCCCCCCEEEECCHHHHHHHHHCCCCCEEEECEEHHHHHHCCCCCCCCCHHH ITRPAYQHALLTGTTEFLRLMLRQVHAYGIDPASLIHALQNHDELTLELVHFWTLHAHDT HCCCHHHHHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEEEEEEEECCE FHYQGQTFPGNILREHIREEMYEKLSGEHAPYNLKFVTNGVSCTTASIITAALGIRDLST EEECCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHH ITDADIQQIQHIHLLLVMYNAMQPGVFALSGWDLVGALTLPAEQVDHLMQDGDTRWVHRG HHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEEECCHHHHHHHHHCCCCCEEECC AYDLVDLDPEAEFSAGDMPRPKTLYGSLVTQLQRPDSFASQLKKILAVRRAYDIAASRQI CCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEE LIPDVEHPGLLVMVHELPAGKGTQITALNFSAETIVETLQLPGIAPGPVVDIINERVEGD EECCCCCCCEEEEEEECCCCCCCEEEEECCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCC LTEQGEFTITLDAYEGLALRVVSALPL CCCCCCEEEEEECCCCHHHHHHHHCCC >Mature Secondary Structure TIPDKQYVEWLVEQSMLNAARQRAKTYSGQGRLWQRPFALARPRDASAIASVWFTAYPA CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCHHCCCCCHHHHHHHHHHHCCH SIVTREGGSVLEALGDETLWHALSEIGIQGIHNGPLKLSGGLQGRERTPSIDGNFDRISF HEEECCCCHHHHHHCHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCEEEE GIDPDLGTEAQLLSLTRIAAAHNAVIIDDIIPSHTGKGADFRLAEMAYEDYPGLFHMVEI CCCCCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCEEHHHHHHHCCCCEEEEEEE REEDWQLLPEVPAGRDAVNLMPDVVDQLRDKHYIVGQLQRVIFFEPGVKETDWSATDVVQ CCCCHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHCEEEEECCCCCCCCCCHHHHHH GVDGKARRWVYLHYFKDGQPSLNWLDPSFAAQQMIIGDALHAIDVMGARVLRLDANGFLG CCCCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCEE VERRAEGTAWSESHPLSITGNQLLAGAIRKAGGFSFQELNLTIDDIASMGQGGADLSYDF ECCCCCCCCCCCCCCEEEECCHHHHHHHHHCCCCCEEEECEEHHHHHHCCCCCCCCCHHH ITRPAYQHALLTGTTEFLRLMLRQVHAYGIDPASLIHALQNHDELTLELVHFWTLHAHDT HCCCHHHHHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEEEEEEEECCE FHYQGQTFPGNILREHIREEMYEKLSGEHAPYNLKFVTNGVSCTTASIITAALGIRDLST EEECCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHH ITDADIQQIQHIHLLLVMYNAMQPGVFALSGWDLVGALTLPAEQVDHLMQDGDTRWVHRG HHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEEECCHHHHHHHHHCCCCCEEECC AYDLVDLDPEAEFSAGDMPRPKTLYGSLVTQLQRPDSFASQLKKILAVRRAYDIAASRQI CCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEE LIPDVEHPGLLVMVHELPAGKGTQITALNFSAETIVETLQLPGIAPGPVVDIINERVEGD EECCCCCCCEEEEEEECCCCCCCEEEEECCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCC LTEQGEFTITLDAYEGLALRVVSALPL CCCCCCEEEEEECCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA