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The map label for this gene is slyA [C]

Identifier: 66045965

GI number: 66045965

Start: 3312593

End: 3313081

Strand: Direct

Name: slyA [C]

Synonym: Psyr_2729

Alternate gene names: 66045965

Gene position: 3312593-3313081 (Clockwise)

Preceding gene: 66045959

Following gene: 66045967

Centisome position: 54.36

GC content: 60.94

Gene sequence:

>489_bases
ATGGCCAAGCCATCTGACATCGCCGACGCCTGCCAGGCTCCCGTACAGGCTGCCGAGGCACGTTTGCCAACGGATTCTGC
GCTGGATGATCTGATCGGTTATGCCATGCGCCGCGCACAGCTCAAGCTGTTCCAGAACCTGATCGGACGTCTTTCCGCAC
ACGACCTGCGCCCGGCGCAGTTCTCGGCACTGGCGATCATCGAGCAGAACCCGGGTCTCATGCAGGCAGACCTGGCCAAG
GCGCTGGCGATCGAACCGCCTCAGGTCGTCCCGTTACTGAACAAGCTCGAAGAGCGCGCGCTGGCCGTCCGGGTGCGTTG
CAAGCCGGACAAGCGCTCGTACGGCATCTTTCTCAGCAAAAGCGGCGAAACACTGCTGCGCGAGCTGAAACAGATCGCCG
TGGACAGCGACCTGGAATCCACTGCCGCGCTGGATCAGAAGGAACGTCAGGACCTGCTCAGGTTGCTGAAAAAGGTGTAT
CAATCGTAA

Upstream 100 bases:

>100_bases
CAGGCTGGTCACAGTCACGTATGCCCCATAGCTATCGTTCGCCAACCTCGGCAAACTGATCGGCTGATTGACCCATCAAA
CCATAAGGACCGCATTTTCA

Downstream 100 bases:

>100_bases
ACGGCTTCCCTGCCGTCAAGGCGGGGTGGTTACCAGAGCGGCAAGCTGTATTGCACGATGAAGCGTGTCTGGTTCTCGTC
ACGAAAGGCTGCACCTGCCG

Product: regulatory protein, MarR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 162; Mature: 161

Protein sequence:

>162_residues
MAKPSDIADACQAPVQAAEARLPTDSALDDLIGYAMRRAQLKLFQNLIGRLSAHDLRPAQFSALAIIEQNPGLMQADLAK
ALAIEPPQVVPLLNKLEERALAVRVRCKPDKRSYGIFLSKSGETLLRELKQIAVDSDLESTAALDQKERQDLLRLLKKVY
QS

Sequences:

>Translated_162_residues
MAKPSDIADACQAPVQAAEARLPTDSALDDLIGYAMRRAQLKLFQNLIGRLSAHDLRPAQFSALAIIEQNPGLMQADLAK
ALAIEPPQVVPLLNKLEERALAVRVRCKPDKRSYGIFLSKSGETLLRELKQIAVDSDLESTAALDQKERQDLLRLLKKVY
QS
>Mature_161_residues
AKPSDIADACQAPVQAAEARLPTDSALDDLIGYAMRRAQLKLFQNLIGRLSAHDLRPAQFSALAIIEQNPGLMQADLAKA
LAIEPPQVVPLLNKLEERALAVRVRCKPDKRSYGIFLSKSGETLLRELKQIAVDSDLESTAALDQKERQDLLRLLKKVYQ
S

Specific function: May be involved in the regulation of genes for 4- hydroxybenzoyl-CoA reductase [H]

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR023187
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 17903; Mature: 17772

Theoretical pI: Translated: 8.71; Mature: 8.71

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKPSDIADACQAPVQAAEARLPTDSALDDLIGYAMRRAQLKLFQNLIGRLSAHDLRPAQ
CCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
FSALAIIEQNPGLMQADLAKALAIEPPQVVPLLNKLEERALAVRVRCKPDKRSYGIFLSK
HHHEEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEECCCCCCCCCEEEEC
SGETLLRELKQIAVDSDLESTAALDQKERQDLLRLLKKVYQS
CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AKPSDIADACQAPVQAAEARLPTDSALDDLIGYAMRRAQLKLFQNLIGRLSAHDLRPAQ
CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
FSALAIIEQNPGLMQADLAKALAIEPPQVVPLLNKLEERALAVRVRCKPDKRSYGIFLSK
HHHEEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEECCCCCCCCCEEEEC
SGETLLRELKQIAVDSDLESTAALDQKERQDLLRLLKKVYQS
CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9490068 [H]