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The map label for this gene is rfbD [H]

Identifier: 66045938

GI number: 66045938

Start: 3282649

End: 3283830

Strand: Reverse

Name: rfbD [H]

Synonym: Psyr_2702

Alternate gene names: 66045938

Gene position: 3283830-3282649 (Counterclockwise)

Preceding gene: 66045939

Following gene: 66045937

Centisome position: 53.89

GC content: 54.57

Gene sequence:

>1182_bases
ATGCCTCGGATAAATCTTGAATCAGCCGCGCGTGAAAAGACGCCCTATGACTTTCTGATCGTCGGTGCAGGTTTTGCAGG
CAGTGTGTTGGCGGAAAGGCTGGCGGCGGGATCGAGCAAGCGCGTTTTGTTGATCGACCGACGTCCACATATCGCGGGTA
ACGCTTACGATCACCTGGACAGTGCCGGGGTGTTGGTTCATCAATACGGGCCCCATATATTCCACACCAACGCTGAGCGG
ATTGTGGAATACCTTTCACGATTTACCGAATGGCGCGATTACGAACACCGTGTGCTCGCCAGCGTAGACAAACAACTGCT
GCCTGTTCCGATCAACCTCGATACGCTCAACAGCCTGTACGGCTTGCAGATGAATGAACAAGAAGCCGAAGCGTTTCTTG
CCAGCCGCGCCGAGCCTGTCGAGACGATAAGAACCTCCGAAGACGTTGTGATCAGTCAGATTGGTCGGGAGCTGTACAAG
AAGTTTTTCCGTGGCTATACCCGCAAACAATGGGGGCTGGACCCTTCGCAACTGGACCGGTCGGTCACCGCCCGAGTACC
TACCCGTACCAACTCGGACAGTCGTTACTTCACGGACACTTTTCAGAAAATGCCGCTGCATGGCTACACGCACATGTTTG
AACAGATACTCAACCACCCGCTTATCGATACCGTACTGGGGGTCGATTTTGCCGATGTGCGCAAGGCGGTGAAGTATTCG
CATTTGATCTATTGCGGGCCGATCGATGAATACTTCGGTTATTGCTACGGCCGTCTTCCGTATCGGTCGTTGCGTTTCGA
GCACAAGACCGTTGATCAGGCGCAGTTTCAATCGGTGGCGGTGATCAACTACCCGGATGAGGCAGTCCCTCATACGCGCA
TCACCGAATACAAGCACCTTACCGGTCAACAGCACGCCAGAACCAGTCTCAGCTACGAGTTTCCAAGTGCCGAGGGCGAC
CCTTATTACCCCATTCCCCGACCCGAAAATGCCGAGTTGTACAAGCGTTACAAAGCATTGGCCGATCAGTCGGATGAAGT
CACTTTCCTTGGGCGACTGGGCACCTACAAGTATTACAACATGGACCAGGTCGTGGGCCAGGCGTTGGCGTTGTACCAGC
GGCTGGCCCATGACTTCCCTGAGCAACCTCCCGAACCGATTGAACAGCCTGCGCGAGGTTGA

Upstream 100 bases:

>100_bases
TTCGCAAAGTTGACGCATTGCTGGTTGGCGAGTCCTGGGACAACACGTGCGCGGCCATGAAGGCGCAAATCGCCCTGGTG
GCCATCGGGGAGCACATCGA

Downstream 100 bases:

>100_bases
GCATGGGCGGTCTGTTCGACAGTTTTTTCATCGGCGGATTCGAGTGCGCCAGCCATCGACGAGGTGACGGTGTGCGACTC
GACCTGCTTCACACCACCGG

Product: UDP-galactopyranose mutase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 393; Mature: 392

Protein sequence:

>393_residues
MPRINLESAAREKTPYDFLIVGAGFAGSVLAERLAAGSSKRVLLIDRRPHIAGNAYDHLDSAGVLVHQYGPHIFHTNAER
IVEYLSRFTEWRDYEHRVLASVDKQLLPVPINLDTLNSLYGLQMNEQEAEAFLASRAEPVETIRTSEDVVISQIGRELYK
KFFRGYTRKQWGLDPSQLDRSVTARVPTRTNSDSRYFTDTFQKMPLHGYTHMFEQILNHPLIDTVLGVDFADVRKAVKYS
HLIYCGPIDEYFGYCYGRLPYRSLRFEHKTVDQAQFQSVAVINYPDEAVPHTRITEYKHLTGQQHARTSLSYEFPSAEGD
PYYPIPRPENAELYKRYKALADQSDEVTFLGRLGTYKYYNMDQVVGQALALYQRLAHDFPEQPPEPIEQPARG

Sequences:

>Translated_393_residues
MPRINLESAAREKTPYDFLIVGAGFAGSVLAERLAAGSSKRVLLIDRRPHIAGNAYDHLDSAGVLVHQYGPHIFHTNAER
IVEYLSRFTEWRDYEHRVLASVDKQLLPVPINLDTLNSLYGLQMNEQEAEAFLASRAEPVETIRTSEDVVISQIGRELYK
KFFRGYTRKQWGLDPSQLDRSVTARVPTRTNSDSRYFTDTFQKMPLHGYTHMFEQILNHPLIDTVLGVDFADVRKAVKYS
HLIYCGPIDEYFGYCYGRLPYRSLRFEHKTVDQAQFQSVAVINYPDEAVPHTRITEYKHLTGQQHARTSLSYEFPSAEGD
PYYPIPRPENAELYKRYKALADQSDEVTFLGRLGTYKYYNMDQVVGQALALYQRLAHDFPEQPPEPIEQPARG
>Mature_392_residues
PRINLESAAREKTPYDFLIVGAGFAGSVLAERLAAGSSKRVLLIDRRPHIAGNAYDHLDSAGVLVHQYGPHIFHTNAERI
VEYLSRFTEWRDYEHRVLASVDKQLLPVPINLDTLNSLYGLQMNEQEAEAFLASRAEPVETIRTSEDVVISQIGRELYKK
FFRGYTRKQWGLDPSQLDRSVTARVPTRTNSDSRYFTDTFQKMPLHGYTHMFEQILNHPLIDTVLGVDFADVRKAVKYSH
LIYCGPIDEYFGYCYGRLPYRSLRFEHKTVDQAQFQSVAVINYPDEAVPHTRITEYKHLTGQQHARTSLSYEFPSAEGDP
YYPIPRPENAELYKRYKALADQSDEVTFLGRLGTYKYYNMDQVVGQALALYQRLAHDFPEQPPEPIEQPARG

Specific function: Involved in the conversion of UDP-GalP into UDP-GalF through a 2-keto intermediate [H]

COG id: COG0562

COG function: function code M; UDP-galactopyranose mutase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788348, Length=361, Percent_Identity=39.0581717451524, Blast_Score=267, Evalue=8e-73,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006076
- InterPro:   IPR016040
- InterPro:   IPR004379
- InterPro:   IPR015899 [H]

Pfam domain/function: PF01266 DAO; PF03275 GLF [H]

EC number: =5.4.99.9 [H]

Molecular weight: Translated: 45163; Mature: 45032

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRINLESAAREKTPYDFLIVGAGFAGSVLAERLAAGSSKRVLLIDRRPHIAGNAYDHLD
CCCCCCHHHHHCCCCCEEEEEECCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHC
SAGVLVHQYGPHIFHTNAERIVEYLSRFTEWRDYEHRVLASVDKQLLPVPINLDTLNSLY
CCCEEEECCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
GLQMNEQEAEAFLASRAEPVETIRTSEDVVISQIGRELYKKFFRGYTRKQWGLDPSQLDR
CCCCCHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHCC
SVTARVPTRTNSDSRYFTDTFQKMPLHGYTHMFEQILNHPLIDTVLGVDFADVRKAVKYS
HHEEECCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHH
HLIYCGPIDEYFGYCYGRLPYRSLRFEHKTVDQAQFQSVAVINYPDEAVPHTRITEYKHL
CEEEECCHHHHHHHHHCCCCHHHHHCHHHHHHHHHHCEEEEEECCCCCCCCCHHHHHHHH
TGQQHARTSLSYEFPSAEGDPYYPIPRPENAELYKRYKALADQSDEVTFLGRLGTYKYYN
CCCHHHHHCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCEECC
MDQVVGQALALYQRLAHDFPEQPPEPIEQPARG
HHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCC
>Mature Secondary Structure 
PRINLESAAREKTPYDFLIVGAGFAGSVLAERLAAGSSKRVLLIDRRPHIAGNAYDHLD
CCCCCHHHHHCCCCCEEEEEECCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHC
SAGVLVHQYGPHIFHTNAERIVEYLSRFTEWRDYEHRVLASVDKQLLPVPINLDTLNSLY
CCCEEEECCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
GLQMNEQEAEAFLASRAEPVETIRTSEDVVISQIGRELYKKFFRGYTRKQWGLDPSQLDR
CCCCCHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHCC
SVTARVPTRTNSDSRYFTDTFQKMPLHGYTHMFEQILNHPLIDTVLGVDFADVRKAVKYS
HHEEECCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHH
HLIYCGPIDEYFGYCYGRLPYRSLRFEHKTVDQAQFQSVAVINYPDEAVPHTRITEYKHL
CEEEECCHHHHHHHHHCCCCHHHHHCHHHHHHHHHHCEEEEEECCCCCCCCCHHHHHHHH
TGQQHARTSLSYEFPSAEGDPYYPIPRPENAELYKRYKALADQSDEVTFLGRLGTYKYYN
CCCHHHHHCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCEECC
MDQVVGQALALYQRLAHDFPEQPPEPIEQPARG
HHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7559323 [H]