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The map label for this gene is uxuR [H]

Identifier: 66045911

GI number: 66045911

Start: 3246619

End: 3247356

Strand: Direct

Name: uxuR [H]

Synonym: Psyr_2675

Alternate gene names: 66045911

Gene position: 3246619-3247356 (Clockwise)

Preceding gene: 66045910

Following gene: 66045912

Centisome position: 53.28

GC content: 64.09

Gene sequence:

>738_bases
ATGCAAAGGTTCGACCCTGACATTCCCATCGACAACTCTTCGAAACTGGCGCTGGATGCGTTGCGCCAGATCGTTGCCCA
GCATGCAGCCTTCCCCCAGCGGGCATTGCCTACCGAGCGGGATCTGGCGGCCGATTTCGGGGTCAGCCGACGGGCAGTTC
GTCGCGCCCTGTCGGTGCTGGAAGCCGAAGGCCAGGTCTGGCGCCGGCAAGGTAAAGGGACCTTTGTCGGACCTACTCCA
CCCAGCGCCGCCATGAGCTTCGCGCGGCTTTCCGGGCGGACCAATTTCACCGAGGTCATGGAAGCGCGCCTGCATCTGGA
GCCGGCACTTGCCTCATTGGCCGCGGTACGGGCCAATGGTGAGCAGATGGCGATTCTGCGCCGCCTTGCCGAGCGCACTA
CTCGCCAGCAGGTCGCCGAGCAGACCGATGCCGAAGGCATCGAGCTGTGGGACAGCGCCCTGCACCGCGCCATTGCCGAA
GCGGCGGGTAATCGACTGATGCTGGACATCTTCGAAATGCTCGATGCGATCCGTCTGGACCCCGCCTGGCGCGACTTGCG
TCACCGGGCGCGTAATGCCGACCGCCTCGACACCTACAGCCACGATCACGACGACATCGTCAGCGCCATTGAAAGCCGCG
ATCCGATCAAGGCCGCCACTGCCATGCGCGGCCATCTACGTGCGCTGCAACAGGCCCTGAACACCGTCATCAACCAAGAC
CTGGAGGCCAGCCTATGA

Upstream 100 bases:

>100_bases
CAATTTTCATTGGCATCGCTCTTGCACCAGCCCTGTTGCCTGGAAACCCTGCCTGCGGGCAGCTCAGGGCCTCTTTTTCC
GGTCTGGCGCGAGTACCACG

Downstream 100 bases:

>100_bases
GCGCCACTGCCCACCTCACAGAAAACGGCGACGGCACGGTGCTCAGCATCAGCGACCTGACCGTACGCTTTGCCGGTGCG
CCCGCCAATGTTGTCGACGG

Product: transcriptional regulator GntR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MQRFDPDIPIDNSSKLALDALRQIVAQHAAFPQRALPTERDLAADFGVSRRAVRRALSVLEAEGQVWRRQGKGTFVGPTP
PSAAMSFARLSGRTNFTEVMEARLHLEPALASLAAVRANGEQMAILRRLAERTTRQQVAEQTDAEGIELWDSALHRAIAE
AAGNRLMLDIFEMLDAIRLDPAWRDLRHRARNADRLDTYSHDHDDIVSAIESRDPIKAATAMRGHLRALQQALNTVINQD
LEASL

Sequences:

>Translated_245_residues
MQRFDPDIPIDNSSKLALDALRQIVAQHAAFPQRALPTERDLAADFGVSRRAVRRALSVLEAEGQVWRRQGKGTFVGPTP
PSAAMSFARLSGRTNFTEVMEARLHLEPALASLAAVRANGEQMAILRRLAERTTRQQVAEQTDAEGIELWDSALHRAIAE
AAGNRLMLDIFEMLDAIRLDPAWRDLRHRARNADRLDTYSHDHDDIVSAIESRDPIKAATAMRGHLRALQQALNTVINQD
LEASL
>Mature_245_residues
MQRFDPDIPIDNSSKLALDALRQIVAQHAAFPQRALPTERDLAADFGVSRRAVRRALSVLEAEGQVWRRQGKGTFVGPTP
PSAAMSFARLSGRTNFTEVMEARLHLEPALASLAAVRANGEQMAILRRLAERTTRQQVAEQTDAEGIELWDSALHRAIAE
AAGNRLMLDIFEMLDAIRLDPAWRDLRHRARNADRLDTYSHDHDDIVSAIESRDPIKAATAMRGHLRALQQALNTVINQD
LEASL

Specific function: Repressor for the uxuRBA operon [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082208, Length=232, Percent_Identity=29.3103448275862, Blast_Score=78, Evalue=5e-16,
Organism=Escherichia coli, GI1790780, Length=223, Percent_Identity=28.2511210762332, Blast_Score=72, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011711
- InterPro:   IPR000524
- InterPro:   IPR011991 [H]

Pfam domain/function: PF07729 FCD; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 27283; Mature: 27283

Theoretical pI: Translated: 6.91; Mature: 6.91

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRFDPDIPIDNSSKLALDALRQIVAQHAAFPQRALPTERDLAADFGVSRRAVRRALSVL
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHCHHHHHHHHHHHHH
EAEGQVWRRQGKGTFVGPTPPSAAMSFARLSGRTNFTEVMEARLHLEPALASLAAVRANG
HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
EQMAILRRLAERTTRQQVAEQTDAEGIELWDSALHRAIAEAAGNRLMLDIFEMLDAIRLD
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC
PAWRDLRHRARNADRLDTYSHDHDDIVSAIESRDPIKAATAMRGHLRALQQALNTVINQD
HHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCH
LEASL
HHCCC
>Mature Secondary Structure
MQRFDPDIPIDNSSKLALDALRQIVAQHAAFPQRALPTERDLAADFGVSRRAVRRALSVL
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHCHHHHHHHHHHHHH
EAEGQVWRRQGKGTFVGPTPPSAAMSFARLSGRTNFTEVMEARLHLEPALASLAAVRANG
HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
EQMAILRRLAERTTRQQVAEQTDAEGIELWDSALHRAIAEAAGNRLMLDIFEMLDAIRLD
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC
PAWRDLRHRARNADRLDTYSHDHDDIVSAIESRDPIKAATAMRGHLRALQQALNTVINQD
HHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCH
LEASL
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]