Click here to switch to the map view.

The map label for this gene is 66045877

Identifier: 66045877

GI number: 66045877

Start: 3209021

End: 3209428

Strand: Reverse

Name: 66045877

Synonym: Psyr_2641

Alternate gene names: NA

Gene position: 3209428-3209021 (Counterclockwise)

Preceding gene: 66045878

Following gene: 66045874

Centisome position: 52.67

GC content: 45.34

Gene sequence:

>408_bases
TTGACTGCTGATTATTACAAAAGCATTGCTCATGCGGGCGTATTTGACAGCTGGGGACTTGGTCTGCTCCTACATAAAAT
GGCAACTGGAAAGCTCCTTCAAATTGCTGATTCACTTGGGGAATATGTAGAGCTAATCCACTCCGGCAGTCTGCAACACC
AGCTTGATCGTCAGATTGATGAAAACTGCCAAGACTACCATCTTGACTTTTTAATCAAGGCTATGCTGAGAGTAAAAACC
GGTGATCGAATGCCTTTGCATGTTGCTACTTCATATGCAGGCCTACTCTACAACAATGATCCGTGCTTATTAGACAAGAG
ACATTCAGATCTTGAAGATTTTGTTAGGCAGGGGTGTGATCCTGAAGCAGGACTGCCGCCCCACGAACGGTCAAACTCTC
CCTACTGA

Upstream 100 bases:

>100_bases
CACCGTACGACTTCGGATATCCCGAGTCCTTGAAGAAGACATGTGGGATGACTTTCACAGGCGGTACGCAGGTTCATTCT
ATAGCCTCGCCCCCGAGTTT

Downstream 100 bases:

>100_bases
GGGCTGGCTGCCGCAGGCTTGAAATTAACTACTAATAAATTTGGATAATATGCGCCAAAACTACTCGCGTATATTTGCCC
GGCGCATTCGTCCAACCTAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 135; Mature: 134

Protein sequence:

>135_residues
MTADYYKSIAHAGVFDSWGLGLLLHKMATGKLLQIADSLGEYVELIHSGSLQHQLDRQIDENCQDYHLDFLIKAMLRVKT
GDRMPLHVATSYAGLLYNNDPCLLDKRHSDLEDFVRQGCDPEAGLPPHERSNSPY

Sequences:

>Translated_135_residues
MTADYYKSIAHAGVFDSWGLGLLLHKMATGKLLQIADSLGEYVELIHSGSLQHQLDRQIDENCQDYHLDFLIKAMLRVKT
GDRMPLHVATSYAGLLYNNDPCLLDKRHSDLEDFVRQGCDPEAGLPPHERSNSPY
>Mature_134_residues
TADYYKSIAHAGVFDSWGLGLLLHKMATGKLLQIADSLGEYVELIHSGSLQHQLDRQIDENCQDYHLDFLIKAMLRVKTG
DRMPLHVATSYAGLLYNNDPCLLDKRHSDLEDFVRQGCDPEAGLPPHERSNSPY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15227; Mature: 15096

Theoretical pI: Translated: 5.78; Mature: 5.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTADYYKSIAHAGVFDSWGLGLLLHKMATGKLLQIADSLGEYVELIHSGSLQHQLDRQID
CCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
ENCQDYHLDFLIKAMLRVKTGDRMPLHVATSYAGLLYNNDPCLLDKRHSDLEDFVRQGCD
CCHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHEEECCCCCEECCCCCCHHHHHHCCCC
PEAGLPPHERSNSPY
CCCCCCCCCCCCCCC
>Mature Secondary Structure 
TADYYKSIAHAGVFDSWGLGLLLHKMATGKLLQIADSLGEYVELIHSGSLQHQLDRQID
CHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
ENCQDYHLDFLIKAMLRVKTGDRMPLHVATSYAGLLYNNDPCLLDKRHSDLEDFVRQGCD
CCHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHEEECCCCCEECCCCCCHHHHHHCCCC
PEAGLPPHERSNSPY
CCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA