| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66045835
Identifier: 66045835
GI number: 66045835
Start: 3051490
End: 3052608
Strand: Reverse
Name: 66045835
Synonym: Psyr_2599
Alternate gene names: NA
Gene position: 3052608-3051490 (Counterclockwise)
Preceding gene: 66045837
Following gene: 66045815
Centisome position: 50.09
GC content: 59.07
Gene sequence:
>1119_bases ATGTTTCACGTCATGTTCAGCATGCCCTGCCTGTACGTCATCGCCCGATTCCTATGGCCGATGCCCTGGGCGTTATCGGC GAAAATCGCCGTTGCGGTGCTGCTTGTCCTTGCCTCGCAATACCATCTGTATTGCCGGTTTTCCTCCGGCAGCGTGTTCT CGCCGGAGTTTCCACGCTACATCGTGATGCTGTTCAACTGGGCGTTCGGCGCGATCCTGTTGCTGGCGGTACTGCAAATC ATTGTCGACATCGGCACATTGCTGACGATGCTGGTGCGCTGGCAGACGCTGAGCATTCCGGCCAATCTGCGGTACTTCAT CGGTGTGGCAGCTCTGGTGCTGGCGGCAGTCGGTGTCCAGCAGGCCGTGCGCGTGCCGCCGGTGAAAGACATCCAGATCG CGATTAAAAACCTGCCTCCGCAATTCGACGGCTATAAAGTGTTGCAACTGACGGACATGCACATCAGTCGTCTGTTCGAT GCGCCGTGGACGCGTGAGGTCGTCAAGCAATCAAATGCGCTGGGTGTCGATCTGATCGTCATCACCGGCGATCTCATTGA CGGCTCGCTGAGCAACCGGAAGCAGGATATCGAGGCCCTGCGCGATTTGCGTGCGCCGGACGGCGTGTACGTCATTCCCG GCAATCATGAGTACTTTTTTGATAACCAGGCGTGGATGCAGCACTTCGTCTCTCTGGGCATGATCCCGCTCGCCAACAGC CACACGCTGATCGAGCACGACGGTGCGCGCATCGCTCTGGCCGGCGTCACTGATGTCACGGCGCCGAAAACCGGCTTCCC TGCGCCAGATCTGCAGAAAGCCATAGCAGGCATCGCGAAAGACACTCCGATCATCCTGCTCGACCATCAACCCAGAAACG CGGAGGAAACAGCGACCCACGGCGTAGCGCTGCAACTCTCCGGGCATACCCATGGCGGCATGATCTTTGGCCTTCACTGG CTGCTGGCCCTGGCCAACGGCGGATTTGTGTCGGGGCTTTATGAGGTGGGCGGGATGCAACTGTACGTCAACAACGGCAC CGCACTCTGGCCGGGGTTTGCCATTCGTCTTGGCAAACCTTCGGAATTGACCCGGATCACGCTTCGGCGGGCGCTTTAG
Upstream 100 bases:
>100_bases GGCCCGGCAATACGCTGCAGTACGAATAGTTCGACCTCATTACTGCCCGTGCCCCTCACGCAGTTATCCACTTCATCGAT ATCGCCAACGGAGCACGTTA
Downstream 100 bases:
>100_bases CGCCCCATCAGCGGGGCGCTAGCTTTATGCACTGAAGATTCGCTCCATCCGTTCACGCGCAGGTCCTGTGAGGCGCTTTA TACCGAACAGTCGAGCAACC
Product: metallophosphoesterase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 372; Mature: 372
Protein sequence:
>372_residues MFHVMFSMPCLYVIARFLWPMPWALSAKIAVAVLLVLASQYHLYCRFSSGSVFSPEFPRYIVMLFNWAFGAILLLAVLQI IVDIGTLLTMLVRWQTLSIPANLRYFIGVAALVLAAVGVQQAVRVPPVKDIQIAIKNLPPQFDGYKVLQLTDMHISRLFD APWTREVVKQSNALGVDLIVITGDLIDGSLSNRKQDIEALRDLRAPDGVYVIPGNHEYFFDNQAWMQHFVSLGMIPLANS HTLIEHDGARIALAGVTDVTAPKTGFPAPDLQKAIAGIAKDTPIILLDHQPRNAEETATHGVALQLSGHTHGGMIFGLHW LLALANGGFVSGLYEVGGMQLYVNNGTALWPGFAIRLGKPSELTRITLRRAL
Sequences:
>Translated_372_residues MFHVMFSMPCLYVIARFLWPMPWALSAKIAVAVLLVLASQYHLYCRFSSGSVFSPEFPRYIVMLFNWAFGAILLLAVLQI IVDIGTLLTMLVRWQTLSIPANLRYFIGVAALVLAAVGVQQAVRVPPVKDIQIAIKNLPPQFDGYKVLQLTDMHISRLFD APWTREVVKQSNALGVDLIVITGDLIDGSLSNRKQDIEALRDLRAPDGVYVIPGNHEYFFDNQAWMQHFVSLGMIPLANS HTLIEHDGARIALAGVTDVTAPKTGFPAPDLQKAIAGIAKDTPIILLDHQPRNAEETATHGVALQLSGHTHGGMIFGLHW LLALANGGFVSGLYEVGGMQLYVNNGTALWPGFAIRLGKPSELTRITLRRAL >Mature_372_residues MFHVMFSMPCLYVIARFLWPMPWALSAKIAVAVLLVLASQYHLYCRFSSGSVFSPEFPRYIVMLFNWAFGAILLLAVLQI IVDIGTLLTMLVRWQTLSIPANLRYFIGVAALVLAAVGVQQAVRVPPVKDIQIAIKNLPPQFDGYKVLQLTDMHISRLFD APWTREVVKQSNALGVDLIVITGDLIDGSLSNRKQDIEALRDLRAPDGVYVIPGNHEYFFDNQAWMQHFVSLGMIPLANS HTLIEHDGARIALAGVTDVTAPKTGFPAPDLQKAIAGIAKDTPIILLDHQPRNAEETATHGVALQLSGHTHGGMIFGLHW LLALANGGFVSGLYEVGGMQLYVNNGTALWPGFAIRLGKPSELTRITLRRAL
Specific function: Unknown
COG id: COG1408
COG function: function code R; Predicted phosphohydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the metallophosphoesterase superfamily [H]
Homologues:
Organism=Homo sapiens, GI210031196, Length=286, Percent_Identity=34.6153846153846, Blast_Score=132, Evalue=6e-31, Organism=Homo sapiens, GI210031210, Length=286, Percent_Identity=34.6153846153846, Blast_Score=129, Evalue=6e-30, Organism=Caenorhabditis elegans, GI115535030, Length=255, Percent_Identity=31.7647058823529, Blast_Score=109, Evalue=3e-24, Organism=Caenorhabditis elegans, GI115535028, Length=255, Percent_Identity=31.7647058823529, Blast_Score=108, Evalue=4e-24, Organism=Caenorhabditis elegans, GI71996034, Length=250, Percent_Identity=29.2, Blast_Score=94, Evalue=1e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004843 [H]
Pfam domain/function: PF00149 Metallophos [H]
EC number: NA
Molecular weight: Translated: 40940; Mature: 40940
Theoretical pI: Translated: 8.26; Mature: 8.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFHVMFSMPCLYVIARFLWPMPWALSAKIAVAVLLVLASQYHLYCRFSSGSVFSPEFPRY CEEEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCHH IVMLFNWAFGAILLLAVLQIIVDIGTLLTMLVRWQTLSIPANLRYFIGVAALVLAAVGVQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHH QAVRVPPVKDIQIAIKNLPPQFDGYKVLQLTDMHISRLFDAPWTREVVKQSNALGVDLIV HHHCCCCCHHHHHHHHCCCCCCCCEEEEEEEHHHHHHHHCCCHHHHHHHCCCCCCEEEEE ITGDLIDGSLSNRKQDIEALRDLRAPDGVYVIPGNHEYFFDNQAWMQHFVSLGMIPLANS EECCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCEEEECCHHHHHHHHHCCCEECCCC HTLIEHDGARIALAGVTDVTAPKTGFPAPDLQKAIAGIAKDTPIILLDHQPRNAEETATH CEEEEECCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHC GVALQLSGHTHGGMIFGLHWLLALANGGFVSGLYEVGGMQLYVNNGTALWPGFAIRLGKP CEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCEEEEECCCCEECCCEEEEECCC SELTRITLRRAL CHHHHHHHHHCC >Mature Secondary Structure MFHVMFSMPCLYVIARFLWPMPWALSAKIAVAVLLVLASQYHLYCRFSSGSVFSPEFPRY CEEEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCHH IVMLFNWAFGAILLLAVLQIIVDIGTLLTMLVRWQTLSIPANLRYFIGVAALVLAAVGVQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHH QAVRVPPVKDIQIAIKNLPPQFDGYKVLQLTDMHISRLFDAPWTREVVKQSNALGVDLIV HHHCCCCCHHHHHHHHCCCCCCCCEEEEEEEHHHHHHHHCCCHHHHHHHCCCCCCEEEEE ITGDLIDGSLSNRKQDIEALRDLRAPDGVYVIPGNHEYFFDNQAWMQHFVSLGMIPLANS EECCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCEEEECCHHHHHHHHHCCCEECCCC HTLIEHDGARIALAGVTDVTAPKTGFPAPDLQKAIAGIAKDTPIILLDHQPRNAEETATH CEEEEECCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHC GVALQLSGHTHGGMIFGLHWLLALANGGFVSGLYEVGGMQLYVNNGTALWPGFAIRLGKP CEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCEEEEECCCCEECCCEEEEECCC SELTRITLRRAL CHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9252185 [H]