| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66045830
Identifier: 66045830
GI number: 66045830
Start: 3040506
End: 3041285
Strand: Direct
Name: 66045830
Synonym: Psyr_2594
Alternate gene names: NA
Gene position: 3040506-3041285 (Clockwise)
Preceding gene: 66045829
Following gene: 66045831
Centisome position: 49.9
GC content: 60.51
Gene sequence:
>780_bases ATGAGTCTGGCGCAGGCGTTCAGCGAATCCGAATGGGCGTTGCTGTCCGGGCCGCTGCGACTCAGGCCGGCAGGTGAACA CGATCCGCGCTCACTGCCGGCCCGCGCGCTGCTGGACGACGCAGTCTGCGAGCAACTGCTTGGCGAGCTGGGGCCGGTGA TCGGTTCTCCGACCCAGGCAATCACGGCATCATTGCTGGCCAAGCGCTTTTCCTTCCTCAGCACCGGTGCCTGCCTGTAC GCGATGTCGGTCTACGACAAGGGCCTGACCCTGTCGCTGGACAACAGCGTGATCGAATACGCGCATGATGACGGCCTTTG GACCTCGTCAATGCCTTTGCTCGATACAACGCCAGTGGGTTATGAGCCGGGCGCTCGCGAAGCATGGCGTGATCAGATCG CCACCACTTTGTTCCGCGACCTGCTTCAGCCGCTGTGGGAAACTTTCAACCGTGTCACAGGCATTTCCCGACGCATTCTG TGGGAAAACACCGCGGTACGTGTCTATTCGCTGTACGACAAGCGCATGGAAAAGGTTGAAGACCCGGCGATCCGGCAGCG CTGTGAAGCCGATTTCGACTGGCTGCTGCACCAGGCCGATCCGGCGCTGTTCGGCCTGACCTACAACCCGCTGAAACACT TCCGCCGTCCACCGGTTGTGCTGGAAGCCGAAGGCAAAAGCATCCGTTTTCGGCGCACCTGCTGCTTCTATTACGACGCC AGCAACCCCGTCGAGTATTGCTCGACCTGTCCGTTACTGAGACCCAGGAAATGTCGATGA
Upstream 100 bases:
>100_bases AGGCGCTGGTCAAGCAGGTCTTCGGCCTCAACTGCCGGATCATCGCCGATCCATTCTTTGGTACGCCGTTGTGCATTCCC TTTGGCCGGGAACTGCCGCA
Downstream 100 bases:
>100_bases ACAAGCAGATTGCACACCGCCAGCAACAACTCAGCGACGCCGTCATAGAGCAATACCGTGATATTGCCGCGTCAACCATT GGCCATCTGACCGACGTGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 259; Mature: 258
Protein sequence:
>259_residues MSLAQAFSESEWALLSGPLRLRPAGEHDPRSLPARALLDDAVCEQLLGELGPVIGSPTQAITASLLAKRFSFLSTGACLY AMSVYDKGLTLSLDNSVIEYAHDDGLWTSSMPLLDTTPVGYEPGAREAWRDQIATTLFRDLLQPLWETFNRVTGISRRIL WENTAVRVYSLYDKRMEKVEDPAIRQRCEADFDWLLHQADPALFGLTYNPLKHFRRPPVVLEAEGKSIRFRRTCCFYYDA SNPVEYCSTCPLLRPRKCR
Sequences:
>Translated_259_residues MSLAQAFSESEWALLSGPLRLRPAGEHDPRSLPARALLDDAVCEQLLGELGPVIGSPTQAITASLLAKRFSFLSTGACLY AMSVYDKGLTLSLDNSVIEYAHDDGLWTSSMPLLDTTPVGYEPGAREAWRDQIATTLFRDLLQPLWETFNRVTGISRRIL WENTAVRVYSLYDKRMEKVEDPAIRQRCEADFDWLLHQADPALFGLTYNPLKHFRRPPVVLEAEGKSIRFRRTCCFYYDA SNPVEYCSTCPLLRPRKCR >Mature_258_residues SLAQAFSESEWALLSGPLRLRPAGEHDPRSLPARALLDDAVCEQLLGELGPVIGSPTQAITASLLAKRFSFLSTGACLYA MSVYDKGLTLSLDNSVIEYAHDDGLWTSSMPLLDTTPVGYEPGAREAWRDQIATTLFRDLLQPLWETFNRVTGISRRILW ENTAVRVYSLYDKRMEKVEDPAIRQRCEADFDWLLHQADPALFGLTYNPLKHFRRPPVVLEAEGKSIRFRRTCCFYYDAS NPVEYCSTCPLLRPRKCR
Specific function: Unknown
COG id: COG4114
COG function: function code R; Uncharacterized Fe-S protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29353; Mature: 29222
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLAQAFSESEWALLSGPLRLRPAGEHDPRSLPARALLDDAVCEQLLGELGPVIGSPTQA CCHHHHHCCCCCEEEECCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHH ITASLLAKRFSFLSTGACLYAMSVYDKGLTLSLDNSVIEYAHDDGLWTSSMPLLDTTPVG HHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEECCHHHHHHCCCCCCCCCCCCCCCCCCC YEPGAREAWRDQIATTLFRDLLQPLWETFNRVTGISRRILWENTAVRVYSLYDKRMEKVE CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHCC DPAIRQRCEADFDWLLHQADPALFGLTYNPLKHFRRPPVVLEAEGKSIRFRRTCCFYYDA CHHHHHHHCCHHHHHHHHCCCCEEECCCCHHHHCCCCCEEEEECCCEEEEEEEEEEEECC SNPVEYCSTCPLLRPRKCR CCHHHHHHCCCCCCCCCCC >Mature Secondary Structure SLAQAFSESEWALLSGPLRLRPAGEHDPRSLPARALLDDAVCEQLLGELGPVIGSPTQA CHHHHHCCCCCEEEECCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHH ITASLLAKRFSFLSTGACLYAMSVYDKGLTLSLDNSVIEYAHDDGLWTSSMPLLDTTPVG HHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEECCHHHHHHCCCCCCCCCCCCCCCCCCC YEPGAREAWRDQIATTLFRDLLQPLWETFNRVTGISRRILWENTAVRVYSLYDKRMEKVE CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHCC DPAIRQRCEADFDWLLHQADPALFGLTYNPLKHFRRPPVVLEAEGKSIRFRRTCCFYYDA CHHHHHHHCCHHHHHHHHCCCCEEECCCCHHHHCCCCCEEEEECCCEEEEEEEEEEEECC SNPVEYCSTCPLLRPRKCR CCHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA