Definition Pseudomonas syringae pv. syringae B728a, complete genome.
Accession NC_007005
Length 6,093,698

Click here to switch to the map view.

The map label for this gene is 66045830

Identifier: 66045830

GI number: 66045830

Start: 3040506

End: 3041285

Strand: Direct

Name: 66045830

Synonym: Psyr_2594

Alternate gene names: NA

Gene position: 3040506-3041285 (Clockwise)

Preceding gene: 66045829

Following gene: 66045831

Centisome position: 49.9

GC content: 60.51

Gene sequence:

>780_bases
ATGAGTCTGGCGCAGGCGTTCAGCGAATCCGAATGGGCGTTGCTGTCCGGGCCGCTGCGACTCAGGCCGGCAGGTGAACA
CGATCCGCGCTCACTGCCGGCCCGCGCGCTGCTGGACGACGCAGTCTGCGAGCAACTGCTTGGCGAGCTGGGGCCGGTGA
TCGGTTCTCCGACCCAGGCAATCACGGCATCATTGCTGGCCAAGCGCTTTTCCTTCCTCAGCACCGGTGCCTGCCTGTAC
GCGATGTCGGTCTACGACAAGGGCCTGACCCTGTCGCTGGACAACAGCGTGATCGAATACGCGCATGATGACGGCCTTTG
GACCTCGTCAATGCCTTTGCTCGATACAACGCCAGTGGGTTATGAGCCGGGCGCTCGCGAAGCATGGCGTGATCAGATCG
CCACCACTTTGTTCCGCGACCTGCTTCAGCCGCTGTGGGAAACTTTCAACCGTGTCACAGGCATTTCCCGACGCATTCTG
TGGGAAAACACCGCGGTACGTGTCTATTCGCTGTACGACAAGCGCATGGAAAAGGTTGAAGACCCGGCGATCCGGCAGCG
CTGTGAAGCCGATTTCGACTGGCTGCTGCACCAGGCCGATCCGGCGCTGTTCGGCCTGACCTACAACCCGCTGAAACACT
TCCGCCGTCCACCGGTTGTGCTGGAAGCCGAAGGCAAAAGCATCCGTTTTCGGCGCACCTGCTGCTTCTATTACGACGCC
AGCAACCCCGTCGAGTATTGCTCGACCTGTCCGTTACTGAGACCCAGGAAATGTCGATGA

Upstream 100 bases:

>100_bases
AGGCGCTGGTCAAGCAGGTCTTCGGCCTCAACTGCCGGATCATCGCCGATCCATTCTTTGGTACGCCGTTGTGCATTCCC
TTTGGCCGGGAACTGCCGCA

Downstream 100 bases:

>100_bases
ACAAGCAGATTGCACACCGCCAGCAACAACTCAGCGACGCCGTCATAGAGCAATACCGTGATATTGCCGCGTCAACCATT
GGCCATCTGACCGACGTGGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 259; Mature: 258

Protein sequence:

>259_residues
MSLAQAFSESEWALLSGPLRLRPAGEHDPRSLPARALLDDAVCEQLLGELGPVIGSPTQAITASLLAKRFSFLSTGACLY
AMSVYDKGLTLSLDNSVIEYAHDDGLWTSSMPLLDTTPVGYEPGAREAWRDQIATTLFRDLLQPLWETFNRVTGISRRIL
WENTAVRVYSLYDKRMEKVEDPAIRQRCEADFDWLLHQADPALFGLTYNPLKHFRRPPVVLEAEGKSIRFRRTCCFYYDA
SNPVEYCSTCPLLRPRKCR

Sequences:

>Translated_259_residues
MSLAQAFSESEWALLSGPLRLRPAGEHDPRSLPARALLDDAVCEQLLGELGPVIGSPTQAITASLLAKRFSFLSTGACLY
AMSVYDKGLTLSLDNSVIEYAHDDGLWTSSMPLLDTTPVGYEPGAREAWRDQIATTLFRDLLQPLWETFNRVTGISRRIL
WENTAVRVYSLYDKRMEKVEDPAIRQRCEADFDWLLHQADPALFGLTYNPLKHFRRPPVVLEAEGKSIRFRRTCCFYYDA
SNPVEYCSTCPLLRPRKCR
>Mature_258_residues
SLAQAFSESEWALLSGPLRLRPAGEHDPRSLPARALLDDAVCEQLLGELGPVIGSPTQAITASLLAKRFSFLSTGACLYA
MSVYDKGLTLSLDNSVIEYAHDDGLWTSSMPLLDTTPVGYEPGAREAWRDQIATTLFRDLLQPLWETFNRVTGISRRILW
ENTAVRVYSLYDKRMEKVEDPAIRQRCEADFDWLLHQADPALFGLTYNPLKHFRRPPVVLEAEGKSIRFRRTCCFYYDAS
NPVEYCSTCPLLRPRKCR

Specific function: Unknown

COG id: COG4114

COG function: function code R; Uncharacterized Fe-S protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29353; Mature: 29222

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLAQAFSESEWALLSGPLRLRPAGEHDPRSLPARALLDDAVCEQLLGELGPVIGSPTQA
CCHHHHHCCCCCEEEECCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHH
ITASLLAKRFSFLSTGACLYAMSVYDKGLTLSLDNSVIEYAHDDGLWTSSMPLLDTTPVG
HHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEECCHHHHHHCCCCCCCCCCCCCCCCCCC
YEPGAREAWRDQIATTLFRDLLQPLWETFNRVTGISRRILWENTAVRVYSLYDKRMEKVE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHCC
DPAIRQRCEADFDWLLHQADPALFGLTYNPLKHFRRPPVVLEAEGKSIRFRRTCCFYYDA
CHHHHHHHCCHHHHHHHHCCCCEEECCCCHHHHCCCCCEEEEECCCEEEEEEEEEEEECC
SNPVEYCSTCPLLRPRKCR
CCHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
SLAQAFSESEWALLSGPLRLRPAGEHDPRSLPARALLDDAVCEQLLGELGPVIGSPTQA
CHHHHHCCCCCEEEECCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHH
ITASLLAKRFSFLSTGACLYAMSVYDKGLTLSLDNSVIEYAHDDGLWTSSMPLLDTTPVG
HHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEECCHHHHHHCCCCCCCCCCCCCCCCCCC
YEPGAREAWRDQIATTLFRDLLQPLWETFNRVTGISRRILWENTAVRVYSLYDKRMEKVE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHCC
DPAIRQRCEADFDWLLHQADPALFGLTYNPLKHFRRPPVVLEAEGKSIRFRRTCCFYYDA
CHHHHHHHCCHHHHHHHHCCCCEEECCCCHHHHCCCCCEEEEECCCEEEEEEEEEEEECC
SNPVEYCSTCPLLRPRKCR
CCHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA