| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66045811
Identifier: 66045811
GI number: 66045811
Start: 2990641
End: 2991414
Strand: Reverse
Name: 66045811
Synonym: Psyr_2575
Alternate gene names: NA
Gene position: 2991414-2990641 (Counterclockwise)
Preceding gene: 66045814
Following gene: 66045807
Centisome position: 49.09
GC content: 60.98
Gene sequence:
>774_bases ATGAACACGGCGCAACATTTCGAGTACCACGACGACCCACGCTTCTATCTGCAACTGGCCAAGCTGGTGTCCAGTACGGG CGACGAGACCTTTGCCGGGCACATGCTGCAATTGGTGGATTCGCTGGTGCCCATTCACGGGCTTGGCCTCAGTGAATGGA CGCTGGACCTGCGCGAGAGCAGCATCAGTCGTATCAATCCGCTGGGCAGCGCGGGCCTGAAGCATGACCCTCCCGGCAAC GAGGCCATCGACCATCCTCTGCTATCCAGCATTCTGCACATGCAGGACCCGTTGTTGATTCAGCTCAAGACCCCGCTGAG CGCGCAACTTCCTCAGCACAACACCCACCAGTGCAATCTGGTGTCCAGCCACGGTGAACGTCGGCTGATCATCTGTTTTT ATCGGCTGACTGCGTTGCGGGCGTTTTCCCTGACAGAGTTGTCCTTGCTCAAGAGCCTCTCCGACACGCTGTTGCCACTG GTCGAGCACCACGCGCAGAGCCTTGCTCAGTCCAGCCACAATGCCACGCGCCTCGAGCCGGAGCCGGGCTCGCTGGATCA GGCCTTCAGTGGCAGGCTTGCACAGGACTCGGTGACACTGTCAGCACGCGAGCAGGAGGTCTGCCTGGGCTTGCTGACCG GTGGCACCGTGGCTGAAATGGCGCAGCGCCTCAAGGTCAAGAACAGTTCGGTGGAGACCTACCTCAAGCGCGCTACCGCC AAACTGGGCGTCAGCGGACGACATGGCCTGGCGCGCTGGATGGCTGGTGATTGA
Upstream 100 bases:
>100_bases CCAAGTGCCATCATCAGGCTTATCAGTAAGTGCAATCAGTAGTTGCCGCGCAGCAGTCGACATGGTCCGTTTTGCGCGGT CGGAATCAGGAAAGCTCAAG
Downstream 100 bases:
>100_bases AGCGCGTATGCCCTGGTGAATGAACTGCAGCAATACGCGCCAAGAAAAAGGGCCACTAAAGGCCCTCTCGCACAGACGCT TCTGCGTTCAATCAACCCGG
Product: regulatory protein, LuxR
Products: NA
Alternate protein names: Regulatory Protein LuxR; LuxR Family Regulatory Protein; Transcriptional Regulator LuxR Family; Transcriptional Regulator SyrR
Number of amino acids: Translated: 257; Mature: 257
Protein sequence:
>257_residues MNTAQHFEYHDDPRFYLQLAKLVSSTGDETFAGHMLQLVDSLVPIHGLGLSEWTLDLRESSISRINPLGSAGLKHDPPGN EAIDHPLLSSILHMQDPLLIQLKTPLSAQLPQHNTHQCNLVSSHGERRLIICFYRLTALRAFSLTELSLLKSLSDTLLPL VEHHAQSLAQSSHNATRLEPEPGSLDQAFSGRLAQDSVTLSAREQEVCLGLLTGGTVAEMAQRLKVKNSSVETYLKRATA KLGVSGRHGLARWMAGD
Sequences:
>Translated_257_residues MNTAQHFEYHDDPRFYLQLAKLVSSTGDETFAGHMLQLVDSLVPIHGLGLSEWTLDLRESSISRINPLGSAGLKHDPPGN EAIDHPLLSSILHMQDPLLIQLKTPLSAQLPQHNTHQCNLVSSHGERRLIICFYRLTALRAFSLTELSLLKSLSDTLLPL VEHHAQSLAQSSHNATRLEPEPGSLDQAFSGRLAQDSVTLSAREQEVCLGLLTGGTVAEMAQRLKVKNSSVETYLKRATA KLGVSGRHGLARWMAGD >Mature_257_residues MNTAQHFEYHDDPRFYLQLAKLVSSTGDETFAGHMLQLVDSLVPIHGLGLSEWTLDLRESSISRINPLGSAGLKHDPPGN EAIDHPLLSSILHMQDPLLIQLKTPLSAQLPQHNTHQCNLVSSHGERRLIICFYRLTALRAFSLTELSLLKSLSDTLLPL VEHHAQSLAQSSHNATRLEPEPGSLDQAFSGRLAQDSVTLSAREQEVCLGLLTGGTVAEMAQRLKVKNSSVETYLKRATA KLGVSGRHGLARWMAGD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28204; Mature: 28204
Theoretical pI: Translated: 6.89; Mature: 6.89
Prosite motif: PS50043 HTH_LUXR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTAQHFEYHDDPRFYLQLAKLVSSTGDETFAGHMLQLVDSLVPIHGLGLSEWTLDLRES CCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH SISRINPLGSAGLKHDPPGNEAIDHPLLSSILHMQDPLLIQLKTPLSAQLPQHNTHQCNL HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCEEEE VSSHGERRLIICFYRLTALRAFSLTELSLLKSLSDTLLPLVEHHAQSLAQSSHNATRLEP ECCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC EPGSLDQAFSGRLAQDSVTLSAREQEVCLGLLTGGTVAEMAQRLKVKNSSVETYLKRATA CCCCHHHHHCCCCCCCCEEECCCHHHHHEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHH KLGVSGRHGLARWMAGD HHCCCCCHHHHHHCCCC >Mature Secondary Structure MNTAQHFEYHDDPRFYLQLAKLVSSTGDETFAGHMLQLVDSLVPIHGLGLSEWTLDLRES CCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH SISRINPLGSAGLKHDPPGNEAIDHPLLSSILHMQDPLLIQLKTPLSAQLPQHNTHQCNL HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCEEEE VSSHGERRLIICFYRLTALRAFSLTELSLLKSLSDTLLPLVEHHAQSLAQSSHNATRLEP ECCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC EPGSLDQAFSGRLAQDSVTLSAREQEVCLGLLTGGTVAEMAQRLKVKNSSVETYLKRATA CCCCHHHHHCCCCCCCCEEECCCHHHHHEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHH KLGVSGRHGLARWMAGD HHCCCCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA