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The map label for this gene is gdh [H]

Identifier: 66045810

GI number: 66045810

Start: 2988178

End: 2990553

Strand: Direct

Name: gdh [H]

Synonym: Psyr_2574

Alternate gene names: 66045810

Gene position: 2988178-2990553 (Clockwise)

Preceding gene: 66045809

Following gene: 66045812

Centisome position: 49.04

GC content: 60.44

Gene sequence:

>2376_bases
ATGATTCTCAAAGTGACCGGTATCGTCATCGCGATACTCAGCCTCATTCTGCTATTCATGGGGGCGCAACTGGTGGCTGC
CGGCGGTTCACCGGCCTACTCGATGATCGCCCTGGGTTTGCTGGCCACAGCAACCCTGGTATTCCTGAAAAGAAAGTCGG
CACTTACCCTGTATGCGGTGATGATGTGGGGGATTCTGCTCTGGATCATCTATGAAGCGGGCCTGGACAAATGGCAGTGG
ATCCCTCGCGGCGATCTGTTTGCACTGATCGGCCTGTGGCTGGCCATGCCCTGGGTCGTGCGGCCGCTTTATCAAGCGCG
GTCGAGCACCGATAAGCGTCGTTTTCATCCGTTGCTGGGCGGTACGCTTGGCGTAATGCTGCTGATCGTGATTGCGCTGA
TGTTTCACGATCCGTACCCGCAGCAAGGGCGGATCGACAGCGTGGCGACCGCCCGCAGCGCCGAGTCGGCAGGCAGTGAC
TGGGCTGCATATGGCGGTAGCAACGCGGGCCAGCGCTTTTCCAGCCTCGATCAGATCACCCCGGACAACGTCGGCAAGCT
GTCGGTGGCCTGGGAATACCACACCGGTGACTTGCGCGATGAAGACGAGGATGCCGGCGAGTACACCTTTGAAGCGACGC
CCCTCAAGATCAACGACCGGGTGTATGTGTGCACGCCTCATAACGAAGTGCATGCGCTGAACCCGCAGACCGGGCAACTG
GCCTGGAAATACACCCCCGAGAAAAAACGCTCGTATTTGCAGCAGCACCAGACCTGCCGTGGCGTCAGCTACTATTCGGC
AGCCTCCAGCCCGACAGGCCAGCCACAACAGCCCGCTCAATGCGCCAAACGCATCATCACCGCGACTGCAGATGCCAGGC
TGGTAGCGCTTGATGCCGACAGCGGCAACCTGTGCAGCGACTTCGGCAGCGGCGGGGTGATCGACTTGAGCTTCAACATG
GGCACGATCCGCCCGCACGCGCTGATGCAGACATCCGCGCCACTGATTGCAGGCGATCTGATAGTGATCGGCAGCTCGAT
CATGGATAACGGTTATAACGACGGCAACCCGTCGGGTGTGATTCGCGCCTACGACGTCATCACCGGCAGGCTGGTATGGA
ATTTCGATCCGCAAAACCCGGACAACACCCAGCCTATAGCGGCTGACCAGAGCTATCCGCAGGACACGCCGGTCGCCTGG
GCAACCCTGAGCGCTGATGTCAAAAACGGTCTGGTGTACGTCCCGTTCGGCAACGCTTCGCCCGACGAAACCGGCACCCG
GCGTAACCCCGACAGCAACACCGAGAAGTTTCGCGATGCACTGGTGGCTCTCGACCTGAAGAGCGGCGCGCTGCGCTGGA
AATTCCAGACCTCGAACAATGACCTTTGGGATCGCGACAACCCATCGCAGCCCTCACTGCTGGATCTGGGAAAAGACGGT
AGCCGCCAGCCTGCCCTGGTGTTGCCGACCAAAGTAGGCAACATCTTTGTGCTTGACCGACTGACGGGCGAGCCGATCGT
GCCTGTCGATCAGGTCAGTGTGCGCACCGCGGGCGGTGTTGAAGGCGAGCGCTTTGCACCCACCCAGCCGGTCTCGCGAC
TTAACTTCATCCCGCCGGTGTTGACCGAGAAGTCCATGTGGGGCGTTACGCCTTTTGACCAGATGGCTTGCCGGATCGCG
TACAACACCCTTCGTTATGACGGTAACCCTTGGACACCGGCCACCGAGTCGGGATCGCTGATCTATCCCGGCAACATAGG
CGTGTTCAACTGGGGTTCGGTGGCCGTGGACCCTGACCGCCAGTTGCTGATCACCGCACCGGTGCGCCTGGCGTATGTCT
ACAACCTGATCAAGCGCCCCGCGCAGGCCCGGGAAAAACGCCTGTTCACTCAGGAGGGCAAGCCCTACTGGAACGAGAAC
TTCGACGGTGACTATGCCATCCGTATTTCCAGATTCGCCTCGAGCCTTGGCATTCCGTGCACAGCGCCACCGTGGGGGAC
CATGGCCGGGGTCGATCTGACGACCGGCAAGACCCAATGGATGCGCCGGGTTGGTACCACCAAAAACCTCAAGACCAGCT
TCATGCAGGGACGTTTTCCGGTCGGTTTTCCCATGGGCATGGTCGCCCATGGCGGTCCGATGGTGACGGCAGGCGGATTG
GCCTTTCACGGCGCGACGGCGGATAACTTTTTCCGCGCCTACGACGTCAATAGCGGCGAAGTGCTCTGGGAACACGAGTT
ACCCGCGGGTGGCCAATCGATTCCTTCGACGTATACCGGCAACGACGGCAAACAGTACGTGGTCATTGCTGCCGGCGGTC
ACGGATCGCTCGGTACGACGTTGGGCGACAGCGTGATTGCCTTCCGGGTTGATTGA

Upstream 100 bases:

>100_bases
TGCCCTGGATGACGCGACACGCAAAAACTGACACTACGGGCTAAATCCGTGGTCGAAGGCGTCGCGGCGCAAGACTGGAT
AACAATAAAGGGCAAGGAAG

Downstream 100 bases:

>100_bases
ACGCAGAAGCGTCTGTGCGAGAGGGCCTTTAGTGGCCCTTTTTCTTGGCGCGTATTGCTGCAGTTCATTCACCAGGGCAT
ACGCGCTTCAATCACCAGCC

Product: quinoprotein

Products: NA

Alternate protein names: Glucose dehydrogenase [pyrroloquinoline-quinone] [H]

Number of amino acids: Translated: 791; Mature: 791

Protein sequence:

>791_residues
MILKVTGIVIAILSLILLFMGAQLVAAGGSPAYSMIALGLLATATLVFLKRKSALTLYAVMMWGILLWIIYEAGLDKWQW
IPRGDLFALIGLWLAMPWVVRPLYQARSSTDKRRFHPLLGGTLGVMLLIVIALMFHDPYPQQGRIDSVATARSAESAGSD
WAAYGGSNAGQRFSSLDQITPDNVGKLSVAWEYHTGDLRDEDEDAGEYTFEATPLKINDRVYVCTPHNEVHALNPQTGQL
AWKYTPEKKRSYLQQHQTCRGVSYYSAASSPTGQPQQPAQCAKRIITATADARLVALDADSGNLCSDFGSGGVIDLSFNM
GTIRPHALMQTSAPLIAGDLIVIGSSIMDNGYNDGNPSGVIRAYDVITGRLVWNFDPQNPDNTQPIAADQSYPQDTPVAW
ATLSADVKNGLVYVPFGNASPDETGTRRNPDSNTEKFRDALVALDLKSGALRWKFQTSNNDLWDRDNPSQPSLLDLGKDG
SRQPALVLPTKVGNIFVLDRLTGEPIVPVDQVSVRTAGGVEGERFAPTQPVSRLNFIPPVLTEKSMWGVTPFDQMACRIA
YNTLRYDGNPWTPATESGSLIYPGNIGVFNWGSVAVDPDRQLLITAPVRLAYVYNLIKRPAQAREKRLFTQEGKPYWNEN
FDGDYAIRISRFASSLGIPCTAPPWGTMAGVDLTTGKTQWMRRVGTTKNLKTSFMQGRFPVGFPMGMVAHGGPMVTAGGL
AFHGATADNFFRAYDVNSGEVLWEHELPAGGQSIPSTYTGNDGKQYVVIAAGGHGSLGTTLGDSVIAFRVD

Sequences:

>Translated_791_residues
MILKVTGIVIAILSLILLFMGAQLVAAGGSPAYSMIALGLLATATLVFLKRKSALTLYAVMMWGILLWIIYEAGLDKWQW
IPRGDLFALIGLWLAMPWVVRPLYQARSSTDKRRFHPLLGGTLGVMLLIVIALMFHDPYPQQGRIDSVATARSAESAGSD
WAAYGGSNAGQRFSSLDQITPDNVGKLSVAWEYHTGDLRDEDEDAGEYTFEATPLKINDRVYVCTPHNEVHALNPQTGQL
AWKYTPEKKRSYLQQHQTCRGVSYYSAASSPTGQPQQPAQCAKRIITATADARLVALDADSGNLCSDFGSGGVIDLSFNM
GTIRPHALMQTSAPLIAGDLIVIGSSIMDNGYNDGNPSGVIRAYDVITGRLVWNFDPQNPDNTQPIAADQSYPQDTPVAW
ATLSADVKNGLVYVPFGNASPDETGTRRNPDSNTEKFRDALVALDLKSGALRWKFQTSNNDLWDRDNPSQPSLLDLGKDG
SRQPALVLPTKVGNIFVLDRLTGEPIVPVDQVSVRTAGGVEGERFAPTQPVSRLNFIPPVLTEKSMWGVTPFDQMACRIA
YNTLRYDGNPWTPATESGSLIYPGNIGVFNWGSVAVDPDRQLLITAPVRLAYVYNLIKRPAQAREKRLFTQEGKPYWNEN
FDGDYAIRISRFASSLGIPCTAPPWGTMAGVDLTTGKTQWMRRVGTTKNLKTSFMQGRFPVGFPMGMVAHGGPMVTAGGL
AFHGATADNFFRAYDVNSGEVLWEHELPAGGQSIPSTYTGNDGKQYVVIAAGGHGSLGTTLGDSVIAFRVD
>Mature_791_residues
MILKVTGIVIAILSLILLFMGAQLVAAGGSPAYSMIALGLLATATLVFLKRKSALTLYAVMMWGILLWIIYEAGLDKWQW
IPRGDLFALIGLWLAMPWVVRPLYQARSSTDKRRFHPLLGGTLGVMLLIVIALMFHDPYPQQGRIDSVATARSAESAGSD
WAAYGGSNAGQRFSSLDQITPDNVGKLSVAWEYHTGDLRDEDEDAGEYTFEATPLKINDRVYVCTPHNEVHALNPQTGQL
AWKYTPEKKRSYLQQHQTCRGVSYYSAASSPTGQPQQPAQCAKRIITATADARLVALDADSGNLCSDFGSGGVIDLSFNM
GTIRPHALMQTSAPLIAGDLIVIGSSIMDNGYNDGNPSGVIRAYDVITGRLVWNFDPQNPDNTQPIAADQSYPQDTPVAW
ATLSADVKNGLVYVPFGNASPDETGTRRNPDSNTEKFRDALVALDLKSGALRWKFQTSNNDLWDRDNPSQPSLLDLGKDG
SRQPALVLPTKVGNIFVLDRLTGEPIVPVDQVSVRTAGGVEGERFAPTQPVSRLNFIPPVLTEKSMWGVTPFDQMACRIA
YNTLRYDGNPWTPATESGSLIYPGNIGVFNWGSVAVDPDRQLLITAPVRLAYVYNLIKRPAQAREKRLFTQEGKPYWNEN
FDGDYAIRISRFASSLGIPCTAPPWGTMAGVDLTTGKTQWMRRVGTTKNLKTSFMQGRFPVGFPMGMVAHGGPMVTAGGL
AFHGATADNFFRAYDVNSGEVLWEHELPAGGQSIPSTYTGNDGKQYVVIAAGGHGSLGTTLGDSVIAFRVD

Specific function: Gdh Is Probably Involved In Energy Conservation Rather Than In Sugar Metabolism. [C]

COG id: COG4993

COG function: function code G; Glucose dehydrogenase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein; Periplasmic side [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial PQQ dehydrogenase family [H]

Homologues:

Organism=Escherichia coli, GI1786316, Length=805, Percent_Identity=39.6273291925466, Blast_Score=556, Evalue=1e-159,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017511
- InterPro:   IPR019556
- InterPro:   IPR019551
- InterPro:   IPR018391
- InterPro:   IPR002372
- InterPro:   IPR011047
- InterPro:   IPR001479 [H]

Pfam domain/function: PF01011 PQQ; PF10535 PQQ_C; PF10527 PQQ_N [H]

EC number: =1.1.5.2 [H]

Molecular weight: Translated: 86070; Mature: 86070

Theoretical pI: Translated: 6.59; Mature: 6.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILKVTGIVIAILSLILLFMGAQLVAAGGSPAYSMIALGLLATATLVFLKRKSALTLYAV
CEEEEHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
MMWGILLWIIYEAGLDKWQWIPRGDLFALIGLWLAMPWVVRPLYQARSSTDKRRFHPLLG
HHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
GTLGVMLLIVIALMFHDPYPQQGRIDSVATARSAESAGSDWAAYGGSNAGQRFSSLDQIT
HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCHHCCCCCCHHCCCCCHHHHHHHHHCCC
PDNVGKLSVAWEYHTGDLRDEDEDAGEYTFEATPLKINDRVYVCTPHNEVHALNPQTGQL
CCCCCEEEEEEEECCCCCCCCCCCCCCEEEEECCEEECCEEEEECCCCCEEECCCCCCCE
AWKYTPEKKRSYLQQHQTCRGVSYYSAASSPTGQPQQPAQCAKRIITATADARLVALDAD
EEEECCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECC
SGNLCSDFGSGGVIDLSFNMGTIRPHALMQTSAPLIAGDLIVIGSSIMDNGYNDGNPSGV
CCCCHHHCCCCCEEEEEECCCCCCCHHHHHCCCCEEECCEEEECCHHHCCCCCCCCCCCE
IRAYDVITGRLVWNFDPQNPDNTQPIAADQSYPQDTPVAWATLSADVKNGLVYVPFGNAS
EEEEEEEEEEEEEEECCCCCCCCCCEECCCCCCCCCCEEEEEEEHHHHCCEEEEECCCCC
PDETGTRRNPDSNTEKFRDALVALDLKSGALRWKFQTSNNDLWDRDNPSQPSLLDLGKDG
CCCCCCCCCCCCHHHHHHHHHEEEEECCCEEEEEEECCCCCCCCCCCCCCCCEEECCCCC
SRQPALVLPTKVGNIFVLDRLTGEPIVPVDQVSVRTAGGVEGERFAPTQPVSRLNFIPPV
CCCCEEEEEECCCCEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHCCCCCC
LTEKSMWGVTPFDQMACRIAYNTLRYDGNPWTPATESGSLIYPGNIGVFNWGSVAVDPDR
CCCCCCCCCCCHHHHHHHHHHHHEEECCCCCCCCCCCCCEEECCCCCEEECCCEEECCCC
QLLITAPVRLAYVYNLIKRPAQAREKRLFTQEGKPYWNENFDGDYAIRISRFASSLGIPC
EEEEECCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEHHHHHCCCCC
TAPPWGTMAGVDLTTGKTQWMRRVGTTKNLKTSFMQGRFPVGFPMGMVAHGGPMVTAGGL
CCCCCCCCCCCEECCCHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCHHCCCCCEEEECCE
AFHGATADNFFRAYDVNSGEVLWEHELPAGGQSIPSTYTGNDGKQYVVIAAGGHGSLGTT
EEECCCHHCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCC
LGDSVIAFRVD
CCCCEEEEEEC
>Mature Secondary Structure
MILKVTGIVIAILSLILLFMGAQLVAAGGSPAYSMIALGLLATATLVFLKRKSALTLYAV
CEEEEHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
MMWGILLWIIYEAGLDKWQWIPRGDLFALIGLWLAMPWVVRPLYQARSSTDKRRFHPLLG
HHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
GTLGVMLLIVIALMFHDPYPQQGRIDSVATARSAESAGSDWAAYGGSNAGQRFSSLDQIT
HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCHHCCCCCCHHCCCCCHHHHHHHHHCCC
PDNVGKLSVAWEYHTGDLRDEDEDAGEYTFEATPLKINDRVYVCTPHNEVHALNPQTGQL
CCCCCEEEEEEEECCCCCCCCCCCCCCEEEEECCEEECCEEEEECCCCCEEECCCCCCCE
AWKYTPEKKRSYLQQHQTCRGVSYYSAASSPTGQPQQPAQCAKRIITATADARLVALDAD
EEEECCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECC
SGNLCSDFGSGGVIDLSFNMGTIRPHALMQTSAPLIAGDLIVIGSSIMDNGYNDGNPSGV
CCCCHHHCCCCCEEEEEECCCCCCCHHHHHCCCCEEECCEEEECCHHHCCCCCCCCCCCE
IRAYDVITGRLVWNFDPQNPDNTQPIAADQSYPQDTPVAWATLSADVKNGLVYVPFGNAS
EEEEEEEEEEEEEEECCCCCCCCCCEECCCCCCCCCCEEEEEEEHHHHCCEEEEECCCCC
PDETGTRRNPDSNTEKFRDALVALDLKSGALRWKFQTSNNDLWDRDNPSQPSLLDLGKDG
CCCCCCCCCCCCHHHHHHHHHEEEEECCCEEEEEEECCCCCCCCCCCCCCCCEEECCCCC
SRQPALVLPTKVGNIFVLDRLTGEPIVPVDQVSVRTAGGVEGERFAPTQPVSRLNFIPPV
CCCCEEEEEECCCCEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHCCCCCC
LTEKSMWGVTPFDQMACRIAYNTLRYDGNPWTPATESGSLIYPGNIGVFNWGSVAVDPDR
CCCCCCCCCCCHHHHHHHHHHHHEEECCCCCCCCCCCCCEEECCCCCEEECCCEEECCCC
QLLITAPVRLAYVYNLIKRPAQAREKRLFTQEGKPYWNENFDGDYAIRISRFASSLGIPC
EEEEECCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEHHHHHCCCCC
TAPPWGTMAGVDLTTGKTQWMRRVGTTKNLKTSFMQGRFPVGFPMGMVAHGGPMVTAGGL
CCCCCCCCCCCEECCCHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCHHCCCCCEEEECCE
AFHGATADNFFRAYDVNSGEVLWEHELPAGGQSIPSTYTGNDGKQYVVIAAGGHGSLGTT
EEECCCHHCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCC
LGDSVIAFRVD
CCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1833618 [H]