| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is imuB [H]
Identifier: 66045758
GI number: 66045758
Start: 2930230
End: 2931660
Strand: Direct
Name: imuB [H]
Synonym: Psyr_2522
Alternate gene names: 66045758
Gene position: 2930230-2931660 (Clockwise)
Preceding gene: 66045757
Following gene: 66045759
Centisome position: 48.09
GC content: 66.04
Gene sequence:
>1431_bases ATGCTCTGGGCCTGTGTCTTGCTGCCGCAACTGGCGCTGGACGGCGTCATGCGTCGTCACGGCAACCCCGATGAACCGCT GGCGCTGATCAGCGGCAGCGCTCAACGTCGCGTGTTGCAGAGCGTCAATCCGGCTGCGCGTGCGTTGGGTCTGAAAGCCG GGCAATCGCTGACCGCAGCCCAGGCGCTGGTGCCCAACTTCACCACGATCGAGCATGACCCGGCCGATATCGAGCGTTTG CAGCAACTGCTCGCGGCCTGGGCCTACGGCTTCAGTTCCAATGTCAGCCTCAAGTACCCGCGGGTGCTGCTGATGGAAAT CGAATCCAGCCTCAAGCTGTTCGGCCCCTGGCCGGTGTTCGAGGCGCGTTTGCGTGAAGAGCTGACCACACAGGGTTTCC GCCATCGCATCGTGGTCGCGCCCAACCCCATAGCCGCGCGAATGCTGGCCAACATGCATGACGGGCTGAGCATCGACTGT CCGCATGAATTGCGTCGCCGTCTGGAGCAGATGCCACTGGAACGCATCGGCCTGAGCCGCGACACCGCTACCGCCCTGAC ACGCATGGGACTGCGCAGTGTGCGGCAGGTGCTGGCGCTGCCCCGCGATACGCTGGCCCGGCGGTTTCCGGCCAGCGTGC TGCAGCACCTTGATACCTTGCTCGGCGAGCGCCCCGTGGCGCTGGAGTGCTACACGCCGCCGGACTTTTTCGATGTACGC ATCGAGCTGAATTTCGACGTCGAGTCCCATCAGGCCCTGTTGTTTCCGCTCAAGCGGCTGATCGCCGATCTGGCCTTGTT CCTGGCCGGACGCGACAGCGGTGTGCAGCGATTTTCCCTGCACCTCGAGCATGTGCCAGGGCCGGAAACCGTCGTGCCGG AGACTGTCGTACCGGTCGGGCTGCTGAGCGCCGAGCGCGATGCGTCGATGCTCTTCGAACTGGCCCGCGGCAGGCTGGAG CAGGTGCTGGTCGCGTCGCCGGTACGTGCCGTGCGCCTGCTGGCGCGAGACTTGCCGGATTTCGTCCCGGCGCACCGTCA GTTGTTCGATGAGCGCGTGCAGCAGACCTTGCCCTGGGAGCAACTGCGCGAGCGCCTGCGGGCGCGTCTGGGCGACGAGT CGGTCAATGGCTTGCGCGCCCAGGCCGATTATCGTCCCGAATGTGCCTGGCAAGCGCACAGCAGCAGTAAACCGGTCCTG CCAGCCAGAGGCTTCACGCGTCCAGGCTGGCTGCTGCGCGAGCCTCAGCCGCTGCCAGTGCAGGCGACCCGCATCGTGGC CGGGCCCGAGCGAATCGAATCCGGGTGGTGGGACGGCGGCGATGTGCGCCGCGACTATTACCTGGTCGAAACCGCCAGTG GCCAACGCGCCTGGGCGTATCGCGCGGTTGGCGAGCCGGGTGAACTGCTGCTGCATGGCTGGTTCGCATGA
Upstream 100 bases:
>100_bases GCGCTCGATACCCGTCCCGCACAGTTGCGGGTACTCAAATGCCGGGGCGGACTTGCGCCGCCTTTCCCCATTCCGTTCCC GACCGACGCTTGAGGTTCTT
Downstream 100 bases:
>100_bases CCCGCGAATACGCCGAGCTGCATTGCCTGTCCAACTTCAGCTTTCAGCGGGGTGCCTCGAGCGCACGCGAGTTGTTCGAA CGGGCGTTGCGTCATGGCTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 476; Mature: 476
Protein sequence:
>476_residues MLWACVLLPQLALDGVMRRHGNPDEPLALISGSAQRRVLQSVNPAARALGLKAGQSLTAAQALVPNFTTIEHDPADIERL QQLLAAWAYGFSSNVSLKYPRVLLMEIESSLKLFGPWPVFEARLREELTTQGFRHRIVVAPNPIAARMLANMHDGLSIDC PHELRRRLEQMPLERIGLSRDTATALTRMGLRSVRQVLALPRDTLARRFPASVLQHLDTLLGERPVALECYTPPDFFDVR IELNFDVESHQALLFPLKRLIADLALFLAGRDSGVQRFSLHLEHVPGPETVVPETVVPVGLLSAERDASMLFELARGRLE QVLVASPVRAVRLLARDLPDFVPAHRQLFDERVQQTLPWEQLRERLRARLGDESVNGLRAQADYRPECAWQAHSSSKPVL PARGFTRPGWLLREPQPLPVQATRIVAGPERIESGWWDGGDVRRDYYLVETASGQRAWAYRAVGEPGELLLHGWFA
Sequences:
>Translated_476_residues MLWACVLLPQLALDGVMRRHGNPDEPLALISGSAQRRVLQSVNPAARALGLKAGQSLTAAQALVPNFTTIEHDPADIERL QQLLAAWAYGFSSNVSLKYPRVLLMEIESSLKLFGPWPVFEARLREELTTQGFRHRIVVAPNPIAARMLANMHDGLSIDC PHELRRRLEQMPLERIGLSRDTATALTRMGLRSVRQVLALPRDTLARRFPASVLQHLDTLLGERPVALECYTPPDFFDVR IELNFDVESHQALLFPLKRLIADLALFLAGRDSGVQRFSLHLEHVPGPETVVPETVVPVGLLSAERDASMLFELARGRLE QVLVASPVRAVRLLARDLPDFVPAHRQLFDERVQQTLPWEQLRERLRARLGDESVNGLRAQADYRPECAWQAHSSSKPVL PARGFTRPGWLLREPQPLPVQATRIVAGPERIESGWWDGGDVRRDYYLVETASGQRAWAYRAVGEPGELLLHGWFA >Mature_476_residues MLWACVLLPQLALDGVMRRHGNPDEPLALISGSAQRRVLQSVNPAARALGLKAGQSLTAAQALVPNFTTIEHDPADIERL QQLLAAWAYGFSSNVSLKYPRVLLMEIESSLKLFGPWPVFEARLREELTTQGFRHRIVVAPNPIAARMLANMHDGLSIDC PHELRRRLEQMPLERIGLSRDTATALTRMGLRSVRQVLALPRDTLARRFPASVLQHLDTLLGERPVALECYTPPDFFDVR IELNFDVESHQALLFPLKRLIADLALFLAGRDSGVQRFSLHLEHVPGPETVVPETVVPVGLLSAERDASMLFELARGRLE QVLVASPVRAVRLLARDLPDFVPAHRQLFDERVQQTLPWEQLRERLRARLGDESVNGLRAQADYRPECAWQAHSSSKPVL PARGFTRPGWLLREPQPLPVQATRIVAGPERIESGWWDGGDVRRDYYLVETASGQRAWAYRAVGEPGELLLHGWFA
Specific function: Along with dnaE2 and imuA is required for the error- prone processing of DNA lesions [H]
COG id: COG0389
COG function: function code L; Nucleotidyltransferase/DNA polymerase involved in DNA repair
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001126 [H]
Pfam domain/function: PF00817 IMS [H]
EC number: NA
Molecular weight: Translated: 53439; Mature: 53439
Theoretical pI: Translated: 8.05; Mature: 8.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLWACVLLPQLALDGVMRRHGNPDEPLALISGSAQRRVLQSVNPAARALGLKAGQSLTAA CCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHCCHHHHHHHHHCCCCHHHH QALVPNFTTIEHDPADIERLQQLLAAWAYGFSSNVSLKYPRVLLMEIESSLKLFGPWPVF HHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHEEEHHHHHEECCCCHHH EARLREELTTQGFRHRIVVAPNPIAARMLANMHDGLSIDCPHELRRRLEQMPLERIGLSR HHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHCCCC DTATALTRMGLRSVRQVLALPRDTLARRFPASVLQHLDTLLGERPVALECYTPPDFFDVR HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEE IELNFDVESHQALLFPLKRLIADLALFLAGRDSGVQRFSLHLEHVPGPETVVPETVVPVG EEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCHHHHHH LLSAERDASMLFELARGRLEQVLVASPVRAVRLLARDLPDFVPAHRQLFDERVQQTLPWE HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCHH QLRERLRARLGDESVNGLRAQADYRPECAWQAHSSSKPVLPARGFTRPGWLLREPQPLPV HHHHHHHHHCCCCHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC QATRIVAGPERIESGWWDGGDVRRDYYLVETASGQRAWAYRAVGEPGELLLHGWFA CCEEEECCHHHHHCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCCCEEEEECCC >Mature Secondary Structure MLWACVLLPQLALDGVMRRHGNPDEPLALISGSAQRRVLQSVNPAARALGLKAGQSLTAA CCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHCCHHHHHHHHHCCCCHHHH QALVPNFTTIEHDPADIERLQQLLAAWAYGFSSNVSLKYPRVLLMEIESSLKLFGPWPVF HHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHEEEHHHHHEECCCCHHH EARLREELTTQGFRHRIVVAPNPIAARMLANMHDGLSIDCPHELRRRLEQMPLERIGLSR HHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHCCCC DTATALTRMGLRSVRQVLALPRDTLARRFPASVLQHLDTLLGERPVALECYTPPDFFDVR HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEE IELNFDVESHQALLFPLKRLIADLALFLAGRDSGVQRFSLHLEHVPGPETVVPETVVPVG EEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCHHHHHH LLSAERDASMLFELARGRLEQVLVASPVRAVRLLARDLPDFVPAHRQLFDERVQQTLPWE HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCHH QLRERLRARLGDESVNGLRAQADYRPECAWQAHSSSKPVLPARGFTRPGWLLREPQPLPV HHHHHHHHHCCCCHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC QATRIVAGPERIESGWWDGGDVRRDYYLVETASGQRAWAYRAVGEPGELLLHGWFA CCEEEECCHHHHHCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA