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The map label for this gene is bbsG [H]

Identifier: 66045710

GI number: 66045710

Start: 2867814

End: 2869043

Strand: Direct

Name: bbsG [H]

Synonym: Psyr_2474

Alternate gene names: 66045710

Gene position: 2867814-2869043 (Clockwise)

Preceding gene: 66045702

Following gene: 66045713

Centisome position: 47.06

GC content: 62.2

Gene sequence:

>1230_bases
ATGGATTTTGCGTATTCCCCGAAGGTGCAGGCCCTGCGTGAACGCGTCACGGCGTTCATGGATGCCTACGTCTATCCGGC
CGAGCCGGTTTTCGAGCGGCAAGTGGCCGAAGGGGATCGCTGGCAGCCCACGGCAATCATGGAAGAGCTCAAGGCCCGGG
CCAGATCGGAAGGATTGTGGAATCTGTTCCTGCCCGACTCCGGACTGGGCGCCGGCCTGAGCAATCTGGAATATGCGCCG
CTGGCGGAAATCATGGGCCGCTCAATGCTCGGTCCCGAGCCCTTCAACTGCTCGGCACCCGACACCGGCAACATGGAGGT
ACTGGTCCGCTATGCCAGCGAGGAACAGAAAGCCCGCTGGCTCGAGCCGCTGCTGCGCGGTGAGATTCGCTCTGCCTTTG
CCATGACCGAGCCCGACGTGGCCTCATCGGACGCCACCAATATGGCCGCGCGCGCTGAGCGTGACGGTGACCAGTGGGTC
ATCAACGGTCGCAAGTGGTGGACCTCTGGTGCCTGCGACCCGCGCTGCAAAATCCTGATATTCATGGGCCTGAGCAATCC
TGAAGGGCCGCGCCATCAGCAGCATTCGATGATTCTGGTGCCGGTCGATACGCCCGGCGTGAAGATCGTGCGGCCACTGC
CGGTGTTTGGTTATGACGATGCGCCCCATGGCCATGCCGAAGTGTTGTTCGAAAACGTCAGGGTTCCGTTCGAAAACGTC
CTGCTCGGCGAGGGGCGTGGGTTTGAAATCGCTCAGGGGCGGCTCGGACCAGGGCGGATTCACCACTGCATGCGCTCGAT
CGGCATGGCGGAGCGGGCGCTGGAGCTGATGTGCAGGCGTTCCATTGACCGCGTAGCATTCGGCAAGCCGTTGGCCAGGC
TGGGCGGCAACATCGACCTGATCGCCGACTCGCGCATGGAAATCGACATGGCACGCCTGCTGACCCTGAAAGCGGCCTAC
ATGATGGATACCGTCGGCAACAAGGTCGCCAGAAGCGAAATCGCGCAGATCAAGGTGGTCGCGCCCAACGTGGCGCTGAA
GGTCATTGATCGGGCGATCCAGATGCACGGCGCCGCCGGGATTTCCAGTGATTTCCCGCTGGCCTACATGTACGCGATGC
AGCGTACGTTGCGTCTGGCTGACGGCCCGGATGAAGTGCATCGCGCTGCCGTCGGCAAGTATGAACTGGGCAAATATATG
CCGGCAGACTCAACGCGCAGCAGGTCCTAG

Upstream 100 bases:

>100_bases
GAATGTTTATACACGCTGGGAATAGATTAGATAAATGTGCAGCGTTTCTCTAGCATCGTGTTCATGACTTCGACAACCTG
ATCGACACGGTGGCGACCCC

Downstream 100 bases:

>100_bases
CTAGCGGTCGATCACTGCACCCAGACTTCAACCCGACGGTTCTTGATCCGGCCGTCGTCGATTTCATTGGTAGCCACCGG
CATTTCGTCACCCAGACCAA

Product: Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 409; Mature: 409

Protein sequence:

>409_residues
MDFAYSPKVQALRERVTAFMDAYVYPAEPVFERQVAEGDRWQPTAIMEELKARARSEGLWNLFLPDSGLGAGLSNLEYAP
LAEIMGRSMLGPEPFNCSAPDTGNMEVLVRYASEEQKARWLEPLLRGEIRSAFAMTEPDVASSDATNMAARAERDGDQWV
INGRKWWTSGACDPRCKILIFMGLSNPEGPRHQQHSMILVPVDTPGVKIVRPLPVFGYDDAPHGHAEVLFENVRVPFENV
LLGEGRGFEIAQGRLGPGRIHHCMRSIGMAERALELMCRRSIDRVAFGKPLARLGGNIDLIADSRMEIDMARLLTLKAAY
MMDTVGNKVARSEIAQIKVVAPNVALKVIDRAIQMHGAAGISSDFPLAYMYAMQRTLRLADGPDEVHRAAVGKYELGKYM
PADSTRSRS

Sequences:

>Translated_409_residues
MDFAYSPKVQALRERVTAFMDAYVYPAEPVFERQVAEGDRWQPTAIMEELKARARSEGLWNLFLPDSGLGAGLSNLEYAP
LAEIMGRSMLGPEPFNCSAPDTGNMEVLVRYASEEQKARWLEPLLRGEIRSAFAMTEPDVASSDATNMAARAERDGDQWV
INGRKWWTSGACDPRCKILIFMGLSNPEGPRHQQHSMILVPVDTPGVKIVRPLPVFGYDDAPHGHAEVLFENVRVPFENV
LLGEGRGFEIAQGRLGPGRIHHCMRSIGMAERALELMCRRSIDRVAFGKPLARLGGNIDLIADSRMEIDMARLLTLKAAY
MMDTVGNKVARSEIAQIKVVAPNVALKVIDRAIQMHGAAGISSDFPLAYMYAMQRTLRLADGPDEVHRAAVGKYELGKYM
PADSTRSRS
>Mature_409_residues
MDFAYSPKVQALRERVTAFMDAYVYPAEPVFERQVAEGDRWQPTAIMEELKARARSEGLWNLFLPDSGLGAGLSNLEYAP
LAEIMGRSMLGPEPFNCSAPDTGNMEVLVRYASEEQKARWLEPLLRGEIRSAFAMTEPDVASSDATNMAARAERDGDQWV
INGRKWWTSGACDPRCKILIFMGLSNPEGPRHQQHSMILVPVDTPGVKIVRPLPVFGYDDAPHGHAEVLFENVRVPFENV
LLGEGRGFEIAQGRLGPGRIHHCMRSIGMAERALELMCRRSIDRVAFGKPLARLGGNIDLIADSRMEIDMARLLTLKAAY
MMDTVGNKVARSEIAQIKVVAPNVALKVIDRAIQMHGAAGISSDFPLAYMYAMQRTLRLADGPDEVHRAAVGKYELGKYM
PADSTRSRS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI211971008, Length=398, Percent_Identity=60.0502512562814, Blast_Score=492, Evalue=1e-139,
Organism=Homo sapiens, GI48976061, Length=398, Percent_Identity=60.0502512562814, Blast_Score=492, Evalue=1e-139,
Organism=Homo sapiens, GI38505218, Length=400, Percent_Identity=55.5, Blast_Score=449, Evalue=1e-126,
Organism=Homo sapiens, GI187960098, Length=347, Percent_Identity=26.2247838616715, Blast_Score=145, Evalue=6e-35,
Organism=Homo sapiens, GI4557231, Length=347, Percent_Identity=26.2247838616715, Blast_Score=145, Evalue=7e-35,
Organism=Homo sapiens, GI4557233, Length=342, Percent_Identity=29.5321637426901, Blast_Score=141, Evalue=9e-34,
Organism=Homo sapiens, GI21361497, Length=375, Percent_Identity=27.4666666666667, Blast_Score=134, Evalue=2e-31,
Organism=Homo sapiens, GI4501859, Length=298, Percent_Identity=27.5167785234899, Blast_Score=115, Evalue=1e-25,
Organism=Homo sapiens, GI7656849, Length=343, Percent_Identity=26.530612244898, Blast_Score=111, Evalue=1e-24,
Organism=Homo sapiens, GI4557235, Length=393, Percent_Identity=26.7175572519084, Blast_Score=104, Evalue=2e-22,
Organism=Homo sapiens, GI76496475, Length=393, Percent_Identity=26.7175572519084, Blast_Score=104, Evalue=2e-22,
Organism=Homo sapiens, GI226958412, Length=389, Percent_Identity=23.9074550128535, Blast_Score=102, Evalue=6e-22,
Organism=Homo sapiens, GI226958414, Length=325, Percent_Identity=25.2307692307692, Blast_Score=97, Evalue=2e-20,
Organism=Homo sapiens, GI4501857, Length=400, Percent_Identity=24.5, Blast_Score=90, Evalue=4e-18,
Organism=Escherichia coli, GI87081958, Length=291, Percent_Identity=28.5223367697594, Blast_Score=94, Evalue=2e-20,
Organism=Escherichia coli, GI1786223, Length=377, Percent_Identity=24.4031830238727, Blast_Score=77, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17562446, Length=399, Percent_Identity=54.1353383458647, Blast_Score=421, Evalue=1e-118,
Organism=Caenorhabditis elegans, GI17534899, Length=350, Percent_Identity=28.5714285714286, Blast_Score=147, Evalue=8e-36,
Organism=Caenorhabditis elegans, GI17569725, Length=359, Percent_Identity=27.8551532033426, Blast_Score=137, Evalue=8e-33,
Organism=Caenorhabditis elegans, GI17570075, Length=404, Percent_Identity=23.2673267326733, Blast_Score=114, Evalue=9e-26,
Organism=Caenorhabditis elegans, GI71985184, Length=357, Percent_Identity=28.2913165266106, Blast_Score=108, Evalue=7e-24,
Organism=Caenorhabditis elegans, GI17538396, Length=392, Percent_Identity=23.7244897959184, Blast_Score=105, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI17508101, Length=287, Percent_Identity=27.5261324041812, Blast_Score=100, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI17533517, Length=294, Percent_Identity=27.891156462585, Blast_Score=97, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI17506239, Length=396, Percent_Identity=25.5050505050505, Blast_Score=97, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI17505929, Length=333, Percent_Identity=24.6246246246246, Blast_Score=92, Evalue=7e-19,
Organism=Caenorhabditis elegans, GI17551932, Length=321, Percent_Identity=23.6760124610592, Blast_Score=87, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI71985192, Length=270, Percent_Identity=27.7777777777778, Blast_Score=87, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI71990804, Length=216, Percent_Identity=29.1666666666667, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24660351, Length=293, Percent_Identity=28.6689419795222, Blast_Score=128, Evalue=7e-30,
Organism=Drosophila melanogaster, GI24646207, Length=292, Percent_Identity=31.8493150684932, Blast_Score=127, Evalue=1e-29,
Organism=Drosophila melanogaster, GI21356377, Length=342, Percent_Identity=28.3625730994152, Blast_Score=125, Evalue=7e-29,
Organism=Drosophila melanogaster, GI24666513, Length=287, Percent_Identity=29.9651567944251, Blast_Score=120, Evalue=2e-27,
Organism=Drosophila melanogaster, GI281363737, Length=394, Percent_Identity=26.9035532994924, Blast_Score=111, Evalue=8e-25,
Organism=Drosophila melanogaster, GI21355753, Length=333, Percent_Identity=25.2252252252252, Blast_Score=91, Evalue=2e-18,
Organism=Drosophila melanogaster, GI19920834, Length=389, Percent_Identity=24.9357326478149, Blast_Score=74, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: =1.3.99.21 [H]

Molecular weight: Translated: 45348; Mature: 45348

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFAYSPKVQALRERVTAFMDAYVYPAEPVFERQVAEGDRWQPTAIMEELKARARSEGLW
CCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCE
NLFLPDSGLGAGLSNLEYAPLAEIMGRSMLGPEPFNCSAPDTGNMEVLVRYASEEQKARW
EEECCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHH
LEPLLRGEIRSAFAMTEPDVASSDATNMAARAERDGDQWVINGRKWWTSGACDPRCKILI
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCEEEECCEEEECCCCCCCCEEEEE
FMGLSNPEGPRHQQHSMILVPVDTPGVKIVRPLPVFGYDDAPHGHAEVLFENVRVPFENV
EEECCCCCCCCCCCCCEEEEECCCCCCEEEECCCCCCCCCCCCCHHHHHHHHCCCCHHHE
LLGEGRGFEIAQGRLGPGRIHHCMRSIGMAERALELMCRRSIDRVAFGKPLARLGGNIDL
EECCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCEEE
IADSRMEIDMARLLTLKAAYMMDTVGNKVARSEIAQIKVVAPNVALKVIDRAIQMHGAAG
EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHCCCC
ISSDFPLAYMYAMQRTLRLADGPDEVHRAAVGKYELGKYMPADSTRSRS
CCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MDFAYSPKVQALRERVTAFMDAYVYPAEPVFERQVAEGDRWQPTAIMEELKARARSEGLW
CCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCE
NLFLPDSGLGAGLSNLEYAPLAEIMGRSMLGPEPFNCSAPDTGNMEVLVRYASEEQKARW
EEECCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHH
LEPLLRGEIRSAFAMTEPDVASSDATNMAARAERDGDQWVINGRKWWTSGACDPRCKILI
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCEEEECCEEEECCCCCCCCEEEEE
FMGLSNPEGPRHQQHSMILVPVDTPGVKIVRPLPVFGYDDAPHGHAEVLFENVRVPFENV
EEECCCCCCCCCCCCCEEEEECCCCCCEEEECCCCCCCCCCCCCHHHHHHHHCCCCHHHE
LLGEGRGFEIAQGRLGPGRIHHCMRSIGMAERALELMCRRSIDRVAFGKPLARLGGNIDL
EECCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCEEE
IADSRMEIDMARLLTLKAAYMMDTVGNKVARSEIAQIKVVAPNVALKVIDRAIQMHGAAG
EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHCCCC
ISSDFPLAYMYAMQRTLRLADGPDEVHRAAVGKYELGKYMPADSTRSRS
CCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10629170; 12420174 [H]