| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is yoaE [H]
Identifier: 66045660
GI number: 66045660
Start: 2805613
End: 2806371
Strand: Direct
Name: yoaE [H]
Synonym: Psyr_2424
Alternate gene names: 66045660
Gene position: 2805613-2806371 (Clockwise)
Preceding gene: 66045659
Following gene: 66045662
Centisome position: 46.04
GC content: 56.92
Gene sequence:
>759_bases ATGGAATACCTATTGGAACTCGCGACAAGTCCGGCAGCCTGGATCGCGCTGGCGACACTGGTGGTGATGGAAGTCGTACT GGGCATCGATAACCTGATTTTCATCTCGATTCTCACCAACAAGCTGCCTGAACATCAGCGCGAGAAGGCTCGCAAGCTGG GTATCGGCATGGCGCTGGTGATGCGCCTGGGTCTGCTCAGTACCGTTGCGTACATCGTGCAGCTGACAGAGCCGGTCTTC GAGGTATTCGGCCAGGCGTTCTCATGGAAGGACATGATCCTGATTGCCGGTGGCCTGTTCCTGGTGTGGAAGGCAACGAC GGAAATTCACCACAGCATGGACATCAAGACCGAGGAGGAGAAAGCCCTGGGTTCGGTGGTGATGTTGAGCATGAGCGCGG CGATCGTACAGATCCTGATGCTGGACCTGGTGTTCTCCATCGACAGTATCATCACTGCCGTGGGCATGACCGAACACCTG CCGATCATGGTCATCGCGGTAATCTCTGCTGTCGTGGTGATGCTTGTTGCAGCCAACCCGCTGGCGAAATTCATCAACGA CAACCCGACGGTGGTCATGCTGGCGCTGGGCTTCCTGATCATGATCGGTATGACACTGATCGCCGAAGGTTTCGGCGCCC ATGTGCCCAAGGGTTACATCTACGCGGCCATGGCTTTCTCGGCAGCCGTTGAAGCCTTGAACATGCTGGTACGCAGGGCA AGACGCAAGAAAGCCGGTACCCAGGTGTCCACGCACTGA
Upstream 100 bases:
>100_bases CTTTCGTTGCAGGAATCACCACCAAACTCGGCTGAAACCGAAAACACGTCTGATAAAGAAATCTGACTTATAACTATTGG CGCAGGCAGGGCAGTGATCT
Downstream 100 bases:
>100_bases TAACGGGCGAAGCGGTAAAAAAGGTCGGCCCTGGCAACAGGGTCGACCTTTTGCATTCAAGGTGCGGGCAAATACGCTGA GGAGGGCAGATCAGCTAAGC
Product: integral membrane protein TerC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 252; Mature: 252
Protein sequence:
>252_residues MEYLLELATSPAAWIALATLVVMEVVLGIDNLIFISILTNKLPEHQREKARKLGIGMALVMRLGLLSTVAYIVQLTEPVF EVFGQAFSWKDMILIAGGLFLVWKATTEIHHSMDIKTEEEKALGSVVMLSMSAAIVQILMLDLVFSIDSIITAVGMTEHL PIMVIAVISAVVVMLVAANPLAKFINDNPTVVMLALGFLIMIGMTLIAEGFGAHVPKGYIYAAMAFSAAVEALNMLVRRA RRKKAGTQVSTH
Sequences:
>Translated_252_residues MEYLLELATSPAAWIALATLVVMEVVLGIDNLIFISILTNKLPEHQREKARKLGIGMALVMRLGLLSTVAYIVQLTEPVF EVFGQAFSWKDMILIAGGLFLVWKATTEIHHSMDIKTEEEKALGSVVMLSMSAAIVQILMLDLVFSIDSIITAVGMTEHL PIMVIAVISAVVVMLVAANPLAKFINDNPTVVMLALGFLIMIGMTLIAEGFGAHVPKGYIYAAMAFSAAVEALNMLVRRA RRKKAGTQVSTH >Mature_252_residues MEYLLELATSPAAWIALATLVVMEVVLGIDNLIFISILTNKLPEHQREKARKLGIGMALVMRLGLLSTVAYIVQLTEPVF EVFGQAFSWKDMILIAGGLFLVWKATTEIHHSMDIKTEEEKALGSVVMLSMSAAIVQILMLDLVFSIDSIITAVGMTEHL PIMVIAVISAVVVMLVAANPLAKFINDNPTVVMLALGFLIMIGMTLIAEGFGAHVPKGYIYAAMAFSAAVEALNMLVRRA RRKKAGTQVSTH
Specific function: Unknown
COG id: COG0861
COG function: function code P; Membrane protein TerC, possibly involved in tellurium resistance
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
Organism=Escherichia coli, GI1788119, Length=239, Percent_Identity=51.0460251046025, Blast_Score=253, Evalue=9e-69, Organism=Escherichia coli, GI1789197, Length=236, Percent_Identity=53.3898305084746, Blast_Score=228, Evalue=3e-61, Organism=Escherichia coli, GI87082033, Length=239, Percent_Identity=46.0251046025105, Blast_Score=209, Evalue=2e-55,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016169 - InterPro: IPR000644 - InterPro: IPR005496 - InterPro: IPR005170 [H]
Pfam domain/function: PF00571 CBS; PF03471 CorC_HlyC; PF03741 TerC [H]
EC number: NA
Molecular weight: Translated: 27381; Mature: 27381
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.7 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.7 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEYLLELATSPAAWIALATLVVMEVVLGIDNLIFISILTNKLPEHQREKARKLGIGMALV CHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH MRLGLLSTVAYIVQLTEPVFEVFGQAFSWKDMILIAGGLFLVWKATTEIHHSMDIKTEEE HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHH KALGSVVMLSMSAAIVQILMLDLVFSIDSIITAVGMTEHLPIMVIAVISAVVVMLVAANP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCHHHHHHHHHHHHHHHHHHCCH LAKFINDNPTVVMLALGFLIMIGMTLIAEGFGAHVPKGYIYAAMAFSAAVEALNMLVRRA HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH RRKKAGTQVSTH HHHHCCCCCCCC >Mature Secondary Structure MEYLLELATSPAAWIALATLVVMEVVLGIDNLIFISILTNKLPEHQREKARKLGIGMALV CHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH MRLGLLSTVAYIVQLTEPVFEVFGQAFSWKDMILIAGGLFLVWKATTEIHHSMDIKTEEE HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHH KALGSVVMLSMSAAIVQILMLDLVFSIDSIITAVGMTEHLPIMVIAVISAVVVMLVAANP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCHHHHHHHHHHHHHHHHHHCCH LAKFINDNPTVVMLALGFLIMIGMTLIAEGFGAHVPKGYIYAAMAFSAAVEALNMLVRRA HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH RRKKAGTQVSTH HHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]