| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66045645
Identifier: 66045645
GI number: 66045645
Start: 2790305
End: 2790895
Strand: Reverse
Name: 66045645
Synonym: Psyr_2409
Alternate gene names: NA
Gene position: 2790895-2790305 (Counterclockwise)
Preceding gene: 66045648
Following gene: 66045644
Centisome position: 45.8
GC content: 59.56
Gene sequence:
>591_bases ATGAGCTTTGAAATTCGCAAGATCGTCACGTACACCGAAGAAACCTTTATCGAGGGCGGCAAAGCCACCGACAAACCGGT CACCATGATCGGACTGGCGGCGGTGATCAAGAACCCCTGGCTGGGCCGTGGCTTCGTCGAAGACCTGAAACCGGAGATCC GCGCCAACTGCTCCGCACTGGGCGAGCTGATGGTCAAGCGCCTCACCGATGCGATTGGCGGTGCGGAAAGAATCGAGGCC TACGGCAAGGCTGCAGTGGTCGGCGCGGAAGGTGAAATCGAACACGCCTCGGCAGTGATCCATACCCTGCGCTTTGGCAA TCATTACCGTGAGGCCGTCAAGGCCAAGAGCTACCTGAGCTTCACCAACAAACGCGGCGGCCCAGGTACGTCGATCCAGA TTCCGATGATGCACAAGGACGATGAAGGGCTGCGCTCGCACTACATCACCCTGGAAATGCACATCGAAGATTCGCCCCGC GCCGACGAAATCATCGTAGTCCTTGGCGCCGCCAACGGCGGACGCCTGCACCCGCGAATCGGCAATCGGTATATCGACCT GGAAGAGCTGGCCGCCGAAAAGGCCCAGTGA
Upstream 100 bases:
>100_bases ACGACAAGCCCGGTAGCCGCCGCAAATAAAGGATTTGCATGCTCGATCCTATGGTATACCATCAGACGAAATACAAAATT ACTCGCTCCGGGAGTCATTC
Downstream 100 bases:
>100_bases TCCATCCCCTTTAACGTCCGCGCAGGAGCGATCCATGATTCAGCTCACCGCTGAACACACCCCGGCGGGTACCAGCTATC TGGCTACCGGCCAAGGTCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 196; Mature: 195
Protein sequence:
>196_residues MSFEIRKIVTYTEETFIEGGKATDKPVTMIGLAAVIKNPWLGRGFVEDLKPEIRANCSALGELMVKRLTDAIGGAERIEA YGKAAVVGAEGEIEHASAVIHTLRFGNHYREAVKAKSYLSFTNKRGGPGTSIQIPMMHKDDEGLRSHYITLEMHIEDSPR ADEIIVVLGAANGGRLHPRIGNRYIDLEELAAEKAQ
Sequences:
>Translated_196_residues MSFEIRKIVTYTEETFIEGGKATDKPVTMIGLAAVIKNPWLGRGFVEDLKPEIRANCSALGELMVKRLTDAIGGAERIEA YGKAAVVGAEGEIEHASAVIHTLRFGNHYREAVKAKSYLSFTNKRGGPGTSIQIPMMHKDDEGLRSHYITLEMHIEDSPR ADEIIVVLGAANGGRLHPRIGNRYIDLEELAAEKAQ >Mature_195_residues SFEIRKIVTYTEETFIEGGKATDKPVTMIGLAAVIKNPWLGRGFVEDLKPEIRANCSALGELMVKRLTDAIGGAERIEAY GKAAVVGAEGEIEHASAVIHTLRFGNHYREAVKAKSYLSFTNKRGGPGTSIQIPMMHKDDEGLRSHYITLEMHIEDSPRA DEIIVVLGAANGGRLHPRIGNRYIDLEELAAEKAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21515; Mature: 21384
Theoretical pI: Translated: 6.64; Mature: 6.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFEIRKIVTYTEETFIEGGKATDKPVTMIGLAAVIKNPWLGRGFVEDLKPEIRANCSAL CCEEHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHCCHHHHHHHHHH GELMVKRLTDAIGGAERIEAYGKAAVVGAEGEIEHASAVIHTLRFGNHYREAVKAKSYLS HHHHHHHHHHHHCCHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHH FTNKRGGPGTSIQIPMMHKDDEGLRSHYITLEMHIEDSPRADEIIVVLGAANGGRLHPRI HHCCCCCCCCEEEEEEEECCCCCCHHEEEEEEEEECCCCCCCEEEEEEECCCCCEECCCC GNRYIDLEELAAEKAQ CCEEECHHHHHHHCCC >Mature Secondary Structure SFEIRKIVTYTEETFIEGGKATDKPVTMIGLAAVIKNPWLGRGFVEDLKPEIRANCSAL CEEHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHCCHHHHHHHHHH GELMVKRLTDAIGGAERIEAYGKAAVVGAEGEIEHASAVIHTLRFGNHYREAVKAKSYLS HHHHHHHHHHHHCCHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHH FTNKRGGPGTSIQIPMMHKDDEGLRSHYITLEMHIEDSPRADEIIVVLGAANGGRLHPRI HHCCCCCCCCEEEEEEEECCCCCCHHEEEEEEEEECCCCCCCEEEEEEECCCCCEECCCC GNRYIDLEELAAEKAQ CCEEECHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA