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The map label for this gene is yagR [H]

Identifier: 66045626

GI number: 66045626

Start: 2770938

End: 2773154

Strand: Direct

Name: yagR [H]

Synonym: Psyr_2390

Alternate gene names: 66045626

Gene position: 2770938-2773154 (Clockwise)

Preceding gene: 66045625

Following gene: 66045627

Centisome position: 45.47

GC content: 62.61

Gene sequence:

>2217_bases
ATGAGCGAAAACATCATTGGTGTGCCGCAGCGTCGTATCGACGGCGGCAAGAAAGTCAGTGGTCAGGCGCGCTATGCCGC
AGACCATCCGATGGGCAAGATGCTTTACGCCTATGGCGTCTACAGCACCATCGCCAACGGGCGCGTGCTGGCCATAAAGG
ATCAGCAGGCCAAGGCGATGCCTGGTGTGGTCGATATCTTTCATCATGACAACTTCCCCACGCTGCACCGTACTCCGAAC
ACCAAACTGAGCTTTGCCAAGATGCTCTCGGCCAGCAAGGCGGACGAGCATCGCCTGCCGTTCGAGGATGACCGTATCTA
CTACCCTGGCCAGTTTGTGGCCCTGGTGGTGGCCGAGAGCTTCGAGCAGGCGAGGGCGGCGGCCTATCGCGTGACGGTGG
ATTACGACGAGCGTCCGGCGGTCAAGGACCTTGCCGAAGGCATGCGCGTCAACGGCGCCCGCGATGGCGGTGCCGGGCAC
AACCGGGGCAACCCGGACAGCGCGTTCGATGGCGCAAAAGTCAAAGTCGACCAGACCTACACCACGCCGGTGGAAGTACA
CAACCCGATGGAAATGCACGCCAGCACCGCCTGGTGGCAGGACGGCAAACTGTTTGTCTATGAAAGCACCCAGGGCGTGG
TCAACCACCGCAACCTGCTGGCCAACGTCTTTGACCTGTCCCCCGACCGGGTGGAAGTGCGCGCGCCCTTCATCGGCTCA
GGGTTCGGCGGCAAGCTGTGGCCGTGGCCGCATTCGGTCGCAGCGTGCGCCGCTGCCAAAGTCACCGGGCGACCGGTGCA
ACTGGTGTTGCCACGTGCGCAGATGTTCACCACGGTGGGCCACCGTCCGGAAACTCGCCAGCGCCTGCGTCTGGCCACCG
ATGCGAGCGGCAAGCTGGTGTCGATTCGTCACGAGTCGTTCAACAACACCTCGATGCTCGATGACTACACCGAAAACTGC
GGTGGCGTGACCAAAAGCCTGTATGCCTGCGATAACGTACTGGTCAGCCACAAGATCAGCCCCATCAACCGCGGTACGCC
GACCTCCATGCGTGCGCCGGGCGCGGCACCGGGTCTGTTTGCACTGGAGTCGGCCATTGATGAAATGGCGCTGGCCAGTG
GCATGGACCCTCTGGCATTCCGCAAGCTGAACCTCTCTGACAAGGATCAGAGCGCAGGCCTGCCGTGGTCCAGCAATCAC
CTGCCTGAAGCCATCGACAAGGCCGCCGAACGGTTTGGCTGGCAGGCACGCAAGGCCGACGTCGGTTCGATGCGCGAAGG
CGATGAAATCATTGGTTACGGCATGGGCGCCTGCAATTGGGAAGCCTATCAGGTGCCCACTGATGCGCGGGTCATTCTGC
GTTCCGACGGCACGGCTCTGGCTCAGTGCGGCTTGCAGGACATCGGCACCGGCACGTACACCATCGTCGCGCAAACCGTC
AGCCAGTTGACCGGCATTCCCATGGAGCGCGTCGAAGTGGAACTGGGCAGCTCGGCGTTCCCGGCAGGCCCGGTGTCCGG
TGGCTCGTGGGTCACTGCCAGCGTAATGCCGGCGATTGCCGGCGCCACCCGCGAAGCGTTGCAGAAACTGCGCCAGTACG
CCGTCAGCAAGGATGCCGTGTTCGCCGGACAGGACGCCGAAGCGATCAAGGTCGAGAACGGTCAACTGGTCATGGGTGAG
CAGCGTGCGAGCTTCGTCGATGTGCTCAATGGCCAGCGTCTGTCGCGTGCCGAGGGCACGTTCCAGAGTGGCATGCCTGA
GGCCGGCAAGTACTCATTCCGCTCGTTCGGCGTGCATTTTGTCGAGGTGCGCTGGGACCCGGGCATTTCCAGCCTGCGCG
TTTCGCGGGTGGTCAGCGCCATTGACGTGGGCAAAGTGGTCAACCCGCTGGCGGCACGCAATCAGGTGGAAGGCGCGATT
GTGATGGGCATCGGCATGGCCTTGTTCGAGGCCGGTGAATACGATCCGCGCAGCGGCATGCCGGTCAATAACAACTACGC
CGAGTACGTGGTACCGGTGCATGCGGATCAACCGGACATCGACGTCCTGCTGCTCGATTATCCGGACTACAACCTGGGTG
AATTCGGCGCACGAGGTATCGGCGAGATCGGTGTGACCGGGCTGGCCGCAGCAGTGGCCAACGCGGTGTATCACGCGACC
GGCAAACGGGTGCGCAGCCTGCCGATCAGCAAGGAAAAACTGATGGCAGGGTTGTAA

Upstream 100 bases:

>100_bases
GAAGGGCTCGCGGGCCTATGAACACAACGCCTTCAAGATCCCGCTGGGTCAGCAGGTCATCGTCCGCAACCTTCGTGACC
TCACGGCCTAGGAATTTCTC

Downstream 100 bases:

>100_bases
CAATGAAACAGCTTGATTTGCAGGTAGTACAACAGGCGAGGGACTGGCTGGCCAGCGGCAAGGCGGTCTGGCTGTGCACG
GTTCTTTCCACGTTCGGCTC

Product: aldehyde oxidase and xanthine dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 738; Mature: 737

Protein sequence:

>738_residues
MSENIIGVPQRRIDGGKKVSGQARYAADHPMGKMLYAYGVYSTIANGRVLAIKDQQAKAMPGVVDIFHHDNFPTLHRTPN
TKLSFAKMLSASKADEHRLPFEDDRIYYPGQFVALVVAESFEQARAAAYRVTVDYDERPAVKDLAEGMRVNGARDGGAGH
NRGNPDSAFDGAKVKVDQTYTTPVEVHNPMEMHASTAWWQDGKLFVYESTQGVVNHRNLLANVFDLSPDRVEVRAPFIGS
GFGGKLWPWPHSVAACAAAKVTGRPVQLVLPRAQMFTTVGHRPETRQRLRLATDASGKLVSIRHESFNNTSMLDDYTENC
GGVTKSLYACDNVLVSHKISPINRGTPTSMRAPGAAPGLFALESAIDEMALASGMDPLAFRKLNLSDKDQSAGLPWSSNH
LPEAIDKAAERFGWQARKADVGSMREGDEIIGYGMGACNWEAYQVPTDARVILRSDGTALAQCGLQDIGTGTYTIVAQTV
SQLTGIPMERVEVELGSSAFPAGPVSGGSWVTASVMPAIAGATREALQKLRQYAVSKDAVFAGQDAEAIKVENGQLVMGE
QRASFVDVLNGQRLSRAEGTFQSGMPEAGKYSFRSFGVHFVEVRWDPGISSLRVSRVVSAIDVGKVVNPLAARNQVEGAI
VMGIGMALFEAGEYDPRSGMPVNNNYAEYVVPVHADQPDIDVLLLDYPDYNLGEFGARGIGEIGVTGLAAAVANAVYHAT
GKRVRSLPISKEKLMAGL

Sequences:

>Translated_738_residues
MSENIIGVPQRRIDGGKKVSGQARYAADHPMGKMLYAYGVYSTIANGRVLAIKDQQAKAMPGVVDIFHHDNFPTLHRTPN
TKLSFAKMLSASKADEHRLPFEDDRIYYPGQFVALVVAESFEQARAAAYRVTVDYDERPAVKDLAEGMRVNGARDGGAGH
NRGNPDSAFDGAKVKVDQTYTTPVEVHNPMEMHASTAWWQDGKLFVYESTQGVVNHRNLLANVFDLSPDRVEVRAPFIGS
GFGGKLWPWPHSVAACAAAKVTGRPVQLVLPRAQMFTTVGHRPETRQRLRLATDASGKLVSIRHESFNNTSMLDDYTENC
GGVTKSLYACDNVLVSHKISPINRGTPTSMRAPGAAPGLFALESAIDEMALASGMDPLAFRKLNLSDKDQSAGLPWSSNH
LPEAIDKAAERFGWQARKADVGSMREGDEIIGYGMGACNWEAYQVPTDARVILRSDGTALAQCGLQDIGTGTYTIVAQTV
SQLTGIPMERVEVELGSSAFPAGPVSGGSWVTASVMPAIAGATREALQKLRQYAVSKDAVFAGQDAEAIKVENGQLVMGE
QRASFVDVLNGQRLSRAEGTFQSGMPEAGKYSFRSFGVHFVEVRWDPGISSLRVSRVVSAIDVGKVVNPLAARNQVEGAI
VMGIGMALFEAGEYDPRSGMPVNNNYAEYVVPVHADQPDIDVLLLDYPDYNLGEFGARGIGEIGVTGLAAAVANAVYHAT
GKRVRSLPISKEKLMAGL
>Mature_737_residues
SENIIGVPQRRIDGGKKVSGQARYAADHPMGKMLYAYGVYSTIANGRVLAIKDQQAKAMPGVVDIFHHDNFPTLHRTPNT
KLSFAKMLSASKADEHRLPFEDDRIYYPGQFVALVVAESFEQARAAAYRVTVDYDERPAVKDLAEGMRVNGARDGGAGHN
RGNPDSAFDGAKVKVDQTYTTPVEVHNPMEMHASTAWWQDGKLFVYESTQGVVNHRNLLANVFDLSPDRVEVRAPFIGSG
FGGKLWPWPHSVAACAAAKVTGRPVQLVLPRAQMFTTVGHRPETRQRLRLATDASGKLVSIRHESFNNTSMLDDYTENCG
GVTKSLYACDNVLVSHKISPINRGTPTSMRAPGAAPGLFALESAIDEMALASGMDPLAFRKLNLSDKDQSAGLPWSSNHL
PEAIDKAAERFGWQARKADVGSMREGDEIIGYGMGACNWEAYQVPTDARVILRSDGTALAQCGLQDIGTGTYTIVAQTVS
QLTGIPMERVEVELGSSAFPAGPVSGGSWVTASVMPAIAGATREALQKLRQYAVSKDAVFAGQDAEAIKVENGQLVMGEQ
RASFVDVLNGQRLSRAEGTFQSGMPEAGKYSFRSFGVHFVEVRWDPGISSLRVSRVVSAIDVGKVVNPLAARNQVEGAIV
MGIGMALFEAGEYDPRSGMPVNNNYAEYVVPVHADQPDIDVLLLDYPDYNLGEFGARGIGEIGVTGLAAAVANAVYHATG
KRVRSLPISKEKLMAGL

Specific function: Unknown

COG id: COG1529

COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the xanthine dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI91823271, Length=772, Percent_Identity=23.4455958549223, Blast_Score=142, Evalue=1e-33,
Organism=Homo sapiens, GI71773480, Length=753, Percent_Identity=24.5683930942895, Blast_Score=140, Evalue=5e-33,
Organism=Escherichia coli, GI1786478, Length=740, Percent_Identity=37.2972972972973, Blast_Score=405, Evalue=1e-114,
Organism=Escherichia coli, GI1789230, Length=763, Percent_Identity=28.4403669724771, Blast_Score=266, Evalue=4e-72,
Organism=Escherichia coli, GI1789246, Length=806, Percent_Identity=25.1861042183623, Blast_Score=169, Evalue=4e-43,
Organism=Caenorhabditis elegans, GI17540638, Length=736, Percent_Identity=21.0597826086957, Blast_Score=119, Evalue=5e-27,
Organism=Caenorhabditis elegans, GI17539860, Length=736, Percent_Identity=21.6032608695652, Blast_Score=100, Evalue=2e-21,
Organism=Drosophila melanogaster, GI24647193, Length=740, Percent_Identity=24.7297297297297, Blast_Score=133, Evalue=4e-31,
Organism=Drosophila melanogaster, GI17737937, Length=736, Percent_Identity=24.7282608695652, Blast_Score=114, Evalue=2e-25,
Organism=Drosophila melanogaster, GI24647199, Length=709, Percent_Identity=21.7207334273625, Blast_Score=103, Evalue=4e-22,
Organism=Drosophila melanogaster, GI24647197, Length=556, Percent_Identity=23.5611510791367, Blast_Score=103, Evalue=6e-22,
Organism=Drosophila melanogaster, GI24647195, Length=556, Percent_Identity=23.5611510791367, Blast_Score=102, Evalue=9e-22,
Organism=Drosophila melanogaster, GI24647201, Length=717, Percent_Identity=22.8730822873082, Blast_Score=96, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000674
- InterPro:   IPR008274 [H]

Pfam domain/function: PF01315 Ald_Xan_dh_C; PF02738 Ald_Xan_dh_C2 [H]

EC number: =1.17.1.4 [H]

Molecular weight: Translated: 79649; Mature: 79518

Theoretical pI: Translated: 6.77; Mature: 6.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSENIIGVPQRRIDGGKKVSGQARYAADHPMGKMLYAYGVYSTIANGRVLAIKDQQAKAM
CCCCCCCCCHHHCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCC
PGVVDIFHHDNFPTLHRTPNTKLSFAKMLSASKADEHRLPFEDDRIYYPGQFVALVVAES
CCEEEEEECCCCCCEECCCCCCHHHHHHHHHCCCCCCCCCCCCCEEECCCCEEEHHHHHH
FEQARAAAYRVTVDYDERPAVKDLAEGMRVNGARDGGAGHNRGNPDSAFDGAKVKVDQTY
HHHHHHEEEEEEECCCCCCCHHHHHCCCEECCCCCCCCCCCCCCCCCCCCCCEEEECCEE
TTPVEVHNPMEMHASTAWWQDGKLFVYESTQGVVNHRNLLANVFDLSPDRVEVRAPFIGS
CCCEEECCCHHHCCCCEEECCCEEEEEECCCCHHHHHHHHHHHHCCCCCCEEEECCEEEC
GFGGKLWPWPHSVAACAAAKVTGRPVQLVLPRAQMFTTVGHRPETRQRLRLATDASGKLV
CCCCCCCCCCHHHHHHHHHHCCCCCEEEEECHHHHHHHCCCCCCHHHHHEEEECCCCCEE
SIRHESFNNTSMLDDYTENCGGVTKSLYACDNVLVSHKISPINRGTPTSMRAPGAAPGLF
EEEECCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHH
ALESAIDEMALASGMDPLAFRKLNLSDKDQSAGLPWSSNHLPEAIDKAAERFGWQARKAD
HHHHHHHHHHHHCCCCHHHEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHCCC
VGSMREGDEIIGYGMGACNWEAYQVPTDARVILRSDGTALAQCGLQDIGTGTYTIVAQTV
CCCCCCCCCEEEECCCCCCCEEEECCCCCEEEEECCCHHHHHCCHHHCCCCHHHHHHHHH
SQLTGIPMERVEVELGSSAFPAGPVSGGSWVTASVMPAIAGATREALQKLRQYAVSKDAV
HHHHCCCHHHEEEEECCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
FAGQDAEAIKVENGQLVMGEQRASFVDVLNGQRLSRAEGTFQSGMPEAGKYSFRSFGVHF
EECCCCCEEEECCCEEEECCCHHHHHHHHCCCCHHHHCCCHHCCCCCCCCCCHHHCCEEE
VEVRWDPGISSLRVSRVVSAIDVGKVVNPLAARNQVEGAIVMGIGMALFEAGEYDPRSGM
EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHCCCCCCCCCC
PVNNNYAEYVVPVHADQPDIDVLLLDYPDYNLGEFGARGIGEIGVTGLAAAVANAVYHAT
CCCCCCCEEEEEEECCCCCCEEEEEECCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHC
GKRVRSLPISKEKLMAGL
CHHHHCCCCCHHHHHCCC
>Mature Secondary Structure 
SENIIGVPQRRIDGGKKVSGQARYAADHPMGKMLYAYGVYSTIANGRVLAIKDQQAKAM
CCCCCCCCHHHCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCC
PGVVDIFHHDNFPTLHRTPNTKLSFAKMLSASKADEHRLPFEDDRIYYPGQFVALVVAES
CCEEEEEECCCCCCEECCCCCCHHHHHHHHHCCCCCCCCCCCCCEEECCCCEEEHHHHHH
FEQARAAAYRVTVDYDERPAVKDLAEGMRVNGARDGGAGHNRGNPDSAFDGAKVKVDQTY
HHHHHHEEEEEEECCCCCCCHHHHHCCCEECCCCCCCCCCCCCCCCCCCCCCEEEECCEE
TTPVEVHNPMEMHASTAWWQDGKLFVYESTQGVVNHRNLLANVFDLSPDRVEVRAPFIGS
CCCEEECCCHHHCCCCEEECCCEEEEEECCCCHHHHHHHHHHHHCCCCCCEEEECCEEEC
GFGGKLWPWPHSVAACAAAKVTGRPVQLVLPRAQMFTTVGHRPETRQRLRLATDASGKLV
CCCCCCCCCCHHHHHHHHHHCCCCCEEEEECHHHHHHHCCCCCCHHHHHEEEECCCCCEE
SIRHESFNNTSMLDDYTENCGGVTKSLYACDNVLVSHKISPINRGTPTSMRAPGAAPGLF
EEEECCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHH
ALESAIDEMALASGMDPLAFRKLNLSDKDQSAGLPWSSNHLPEAIDKAAERFGWQARKAD
HHHHHHHHHHHHCCCCHHHEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHCCC
VGSMREGDEIIGYGMGACNWEAYQVPTDARVILRSDGTALAQCGLQDIGTGTYTIVAQTV
CCCCCCCCCEEEECCCCCCCEEEECCCCCEEEEECCCHHHHHCCHHHCCCCHHHHHHHHH
SQLTGIPMERVEVELGSSAFPAGPVSGGSWVTASVMPAIAGATREALQKLRQYAVSKDAV
HHHHCCCHHHEEEEECCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
FAGQDAEAIKVENGQLVMGEQRASFVDVLNGQRLSRAEGTFQSGMPEAGKYSFRSFGVHF
EECCCCCEEEECCCEEEECCCHHHHHHHHCCCCHHHHCCCHHCCCCCCCCCCHHHCCEEE
VEVRWDPGISSLRVSRVVSAIDVGKVVNPLAARNQVEGAIVMGIGMALFEAGEYDPRSGM
EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHCCCCCCCCCC
PVNNNYAEYVVPVHADQPDIDVLLLDYPDYNLGEFGARGIGEIGVTGLAAAVANAVYHAT
CCCCCCCEEEEEEECCCCCCEEEEEECCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHC
GKRVRSLPISKEKLMAGL
CHHHHCCCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]