Click here to switch to the map view.

The map label for this gene is yfnA [H]

Identifier: 66045615

GI number: 66045615

Start: 2758476

End: 2759789

Strand: Reverse

Name: yfnA [H]

Synonym: Psyr_2379

Alternate gene names: 66045615

Gene position: 2759789-2758476 (Counterclockwise)

Preceding gene: 66045620

Following gene: 66045613

Centisome position: 45.29

GC content: 63.47

Gene sequence:

>1314_bases
ATGGCCACTGCCGAGACTTCATCGCTGCGCCGGGCAATCACGGCGCCCATGCTGACCCTGTTCATCCTTGGCGACGTGCT
GGGGGCTGGCGTCTACGCATTGGCTGGCACGATCGCCGGACGCGTCGGCGGAGCCATCTGGGCGCCCTTGCTGATTGCCC
TGTGCTTTGCCTTGTTGACCGCAGCGTCCTACGCCGAACTGGTGACCAAATACCCGCGTGCGGGTGGTGCCGCGGTGTAC
GCCGAAAAAGCCTTCGGCAAGCCGCTGCTGTCGTTTCTGGTTGGCTTTTCCATGGTCGCGGCAGGTGTTACCAGCGCTGC
CGGGTTGGCCGTTGCGTTTGCCGGCGACTACTTCCAGGCACTGCTCGACTGGCCTGCGCAGTGGGTCTGCGTGGCATTTC
TGGTCACCGTCGGCCTGCTCAATGCACGCGGTATCAAGGAATCGCTTTCAGCCAATCTGGTCATGACGGTCATCGAGCTG
AGCGGCTTGCTGATGGTGATCGCGGCAGCGATCTGGTTCGTCAGCCAGGGGCAAGGCGTGCCGCAACGGGTGTTCGAACT
GGATAGCGCCTCGCCTGCGACGGCGATTCTCGGCGCATCGCTGCTGGCGTTCTATTCGTTCGTGGGGTTTGAAACCTCGG
CCAACCTTGCCGAAGAGATCAAGGACGTGCGCAAGGTCTATCCACGTGCCCTGTTCGGCGCGCTGCTGGCGGCGGGTGCG
GTGTACATACTGGTTGGCATGGGCGCAGCGATGGTCCTGCCCGTCGAGCAACTCAAGGATTCGCAAGCCCCCCTGATGGA
CGTGGTCAGTGCCTCGGGCCTCGGCATACCTGCGCCGTGGTTTGCGGTGATTGCGCTGATTGCGGTGGCCAACGGCGCAC
TGCTGACCATGATCATGGCCAGCCGACTGACCTTCGGCATGGCGCGCGAAGGCCTGTTACCTGCGGTGATGGGTTCGGTG
CTGCCCAAGCGGCGCACGCCGGGGCTGGCAATTCTGGCGACCACACTGGTGGCCATTGCCCTGTCCTTCACCAGCACCCT
GACCATCCTCGCCGAAACCGTCGTGCTGTTGCTGCTCTTCGTGTTTCTCAGCGTGAACATCGCCGTGCTGGTACTCAAGC
GCGACAAGGTCGAAGCCGGGCACTTTCAGGTCCACTGGGTTATCCCGCTGCTGGGCATTCTTTCGTGCCTGTTGCTGCTC
ACTCAGCAAGGTCCGGAAACCTGGCTGCGGGCAGGCATCATGCTGGCGGTCGGTGCTGCGCTTTACGGACTGACCCGGCT
GGGCAGCTCGGCGCTGGCGTCGCATCCTCGCTGA

Upstream 100 bases:

>100_bases
AGCGCCGCTGGTCCAGGCCAGCCACCATCGTTTTGAATTTACCTGTCGCGCGACGCTCTGCTGTTGATACCCGCACCTGT
AGAGAAAGGAATCCTTGACC

Downstream 100 bases:

>100_bases
ACAGTACAGTCATTGCTTCAGCGCTCGCCGGTGCCTTGCTGGAGCCCGGCAAGCGCAAGTTCCAGCCCGTCGATGATGAG
CTGCAAGCCGAACCTGAACT

Product: amino acid permease-associated region

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 437; Mature: 436

Protein sequence:

>437_residues
MATAETSSLRRAITAPMLTLFILGDVLGAGVYALAGTIAGRVGGAIWAPLLIALCFALLTAASYAELVTKYPRAGGAAVY
AEKAFGKPLLSFLVGFSMVAAGVTSAAGLAVAFAGDYFQALLDWPAQWVCVAFLVTVGLLNARGIKESLSANLVMTVIEL
SGLLMVIAAAIWFVSQGQGVPQRVFELDSASPATAILGASLLAFYSFVGFETSANLAEEIKDVRKVYPRALFGALLAAGA
VYILVGMGAAMVLPVEQLKDSQAPLMDVVSASGLGIPAPWFAVIALIAVANGALLTMIMASRLTFGMAREGLLPAVMGSV
LPKRRTPGLAILATTLVAIALSFTSTLTILAETVVLLLLFVFLSVNIAVLVLKRDKVEAGHFQVHWVIPLLGILSCLLLL
TQQGPETWLRAGIMLAVGAALYGLTRLGSSALASHPR

Sequences:

>Translated_437_residues
MATAETSSLRRAITAPMLTLFILGDVLGAGVYALAGTIAGRVGGAIWAPLLIALCFALLTAASYAELVTKYPRAGGAAVY
AEKAFGKPLLSFLVGFSMVAAGVTSAAGLAVAFAGDYFQALLDWPAQWVCVAFLVTVGLLNARGIKESLSANLVMTVIEL
SGLLMVIAAAIWFVSQGQGVPQRVFELDSASPATAILGASLLAFYSFVGFETSANLAEEIKDVRKVYPRALFGALLAAGA
VYILVGMGAAMVLPVEQLKDSQAPLMDVVSASGLGIPAPWFAVIALIAVANGALLTMIMASRLTFGMAREGLLPAVMGSV
LPKRRTPGLAILATTLVAIALSFTSTLTILAETVVLLLLFVFLSVNIAVLVLKRDKVEAGHFQVHWVIPLLGILSCLLLL
TQQGPETWLRAGIMLAVGAALYGLTRLGSSALASHPR
>Mature_436_residues
ATAETSSLRRAITAPMLTLFILGDVLGAGVYALAGTIAGRVGGAIWAPLLIALCFALLTAASYAELVTKYPRAGGAAVYA
EKAFGKPLLSFLVGFSMVAAGVTSAAGLAVAFAGDYFQALLDWPAQWVCVAFLVTVGLLNARGIKESLSANLVMTVIELS
GLLMVIAAAIWFVSQGQGVPQRVFELDSASPATAILGASLLAFYSFVGFETSANLAEEIKDVRKVYPRALFGALLAAGAV
YILVGMGAAMVLPVEQLKDSQAPLMDVVSASGLGIPAPWFAVIALIAVANGALLTMIMASRLTFGMAREGLLPAVMGSVL
PKRRTPGLAILATTLVAIALSFTSTLTILAETVVLLLLFVFLSVNIAVLVLKRDKVEAGHFQVHWVIPLLGILSCLLLLT
QQGPETWLRAGIMLAVGAALYGLTRLGSSALASHPR

Specific function: Probable Amino-Acid Or Metabolite Transport Protein. [C]

COG id: COG0531

COG function: function code E; Amino acid transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]

Homologues:

Organism=Homo sapiens, GI258614005, Length=413, Percent_Identity=26.1501210653753, Blast_Score=96, Evalue=6e-20,
Organism=Homo sapiens, GI258614003, Length=413, Percent_Identity=26.1501210653753, Blast_Score=96, Evalue=8e-20,
Organism=Homo sapiens, GI258645169, Length=413, Percent_Identity=26.634382566586, Blast_Score=95, Evalue=1e-19,
Organism=Homo sapiens, GI4507047, Length=418, Percent_Identity=25.8373205741627, Blast_Score=91, Evalue=2e-18,
Organism=Homo sapiens, GI181337167, Length=390, Percent_Identity=23.0769230769231, Blast_Score=79, Evalue=8e-15,
Organism=Homo sapiens, GI110347453, Length=404, Percent_Identity=25.2475247524752, Blast_Score=68, Evalue=2e-11,
Organism=Escherichia coli, GI87082023, Length=409, Percent_Identity=29.5843520782396, Blast_Score=121, Evalue=8e-29,
Organism=Escherichia coli, GI87081869, Length=401, Percent_Identity=26.1845386533666, Blast_Score=110, Evalue=2e-25,
Organism=Escherichia coli, GI87082250, Length=389, Percent_Identity=26.2210796915167, Blast_Score=93, Evalue=3e-20,
Organism=Escherichia coli, GI1790584, Length=223, Percent_Identity=33.1838565022422, Blast_Score=72, Evalue=6e-14,
Organism=Escherichia coli, GI2367353, Length=428, Percent_Identity=24.7663551401869, Blast_Score=63, Evalue=4e-11,
Organism=Escherichia coli, GI1786694, Length=400, Percent_Identity=24, Blast_Score=62, Evalue=8e-11,
Organism=Caenorhabditis elegans, GI17532491, Length=443, Percent_Identity=25.2821670428894, Blast_Score=104, Evalue=8e-23,
Organism=Caenorhabditis elegans, GI17533459, Length=405, Percent_Identity=25.9259259259259, Blast_Score=87, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI32566699, Length=286, Percent_Identity=28.6713286713287, Blast_Score=86, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI71990446, Length=453, Percent_Identity=24.2825607064018, Blast_Score=76, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI71995388, Length=240, Percent_Identity=26.6666666666667, Blast_Score=68, Evalue=8e-12,
Organism=Caenorhabditis elegans, GI71995382, Length=240, Percent_Identity=26.6666666666667, Blast_Score=68, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI71982608, Length=397, Percent_Identity=24.4332493702771, Blast_Score=67, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI71982612, Length=397, Percent_Identity=24.4332493702771, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI221512776, Length=402, Percent_Identity=25.6218905472637, Blast_Score=100, Evalue=4e-21,
Organism=Drosophila melanogaster, GI24666159, Length=409, Percent_Identity=25.6723716381418, Blast_Score=100, Evalue=4e-21,
Organism=Drosophila melanogaster, GI24667468, Length=397, Percent_Identity=25.4408060453401, Blast_Score=97, Evalue=2e-20,
Organism=Drosophila melanogaster, GI24668806, Length=406, Percent_Identity=25.3694581280788, Blast_Score=85, Evalue=1e-16,
Organism=Drosophila melanogaster, GI21356285, Length=406, Percent_Identity=25.3694581280788, Blast_Score=85, Evalue=1e-16,
Organism=Drosophila melanogaster, GI24668802, Length=406, Percent_Identity=25.3694581280788, Blast_Score=85, Evalue=1e-16,
Organism=Drosophila melanogaster, GI161077963, Length=393, Percent_Identity=23.1552162849873, Blast_Score=84, Evalue=3e-16,
Organism=Drosophila melanogaster, GI281366235, Length=415, Percent_Identity=25.7831325301205, Blast_Score=77, Evalue=3e-14,
Organism=Drosophila melanogaster, GI116007820, Length=415, Percent_Identity=25.7831325301205, Blast_Score=77, Evalue=3e-14,
Organism=Drosophila melanogaster, GI45550968, Length=446, Percent_Identity=25.1121076233184, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI19921172, Length=446, Percent_Identity=25.1121076233184, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI116007818, Length=395, Percent_Identity=25.8227848101266, Blast_Score=72, Evalue=6e-13,
Organism=Drosophila melanogaster, GI85725152, Length=395, Percent_Identity=25.8227848101266, Blast_Score=72, Evalue=6e-13,
Organism=Drosophila melanogaster, GI21357367, Length=421, Percent_Identity=23.9904988123515, Blast_Score=66, Evalue=4e-11,
Organism=Drosophila melanogaster, GI24651635, Length=373, Percent_Identity=23.5924932975871, Blast_Score=65, Evalue=7e-11,
Organism=Drosophila melanogaster, GI24651633, Length=373, Percent_Identity=23.5924932975871, Blast_Score=65, Evalue=7e-11,
Organism=Drosophila melanogaster, GI221331183, Length=429, Percent_Identity=24.2424242424242, Blast_Score=65, Evalue=7e-11,
Organism=Drosophila melanogaster, GI17647653, Length=429, Percent_Identity=24.2424242424242, Blast_Score=65, Evalue=7e-11,
Organism=Drosophila melanogaster, GI24664379, Length=429, Percent_Identity=24.2424242424242, Blast_Score=65, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004841
- InterPro:   IPR002293
- InterPro:   IPR015606 [H]

Pfam domain/function: PF00324 AA_permease [H]

EC number: NA

Molecular weight: Translated: 45474; Mature: 45343

Theoretical pI: Translated: 9.05; Mature: 9.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHCCHHHCCCCC
>Mature Secondary Structure 
ATAETSSLRRAITAPMLTLFILGDVLGAGVYALAGTIAGRVGGAIWAPLLIALCFALLT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH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HHHHHHHCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9141694; 9384377 [H]