| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is fbp [H]
Identifier: 66045577
GI number: 66045577
Start: 2716762
End: 2717136
Strand: Reverse
Name: fbp [H]
Synonym: Psyr_2340
Alternate gene names: 66045577
Gene position: 2717136-2716762 (Counterclockwise)
Preceding gene: 66045578
Following gene: 66045576
Centisome position: 44.59
GC content: 58.93
Gene sequence:
>375_bases ATGACAGAGCGCGCAGCAACCGGAAGCATCGCAATGAGCAAAGAATTACAGATTACTGATCTGCACCTCGGCGAGGGCAA GGCAGCGGTAAAGGGTGCGCTGATCACCACGCATTACACCGGAACCCTTGAGGACGGGACTGTGTTCGATTCCTCCCACG AGCGTGGCAAGCCATTTCAGTGTGTGATCGGCACCGGTCGCGTCATCAAGGGCTGGGACCAGGGCCTGATGGGCATGAAA GTCGGCGGCAAGCGTCAATTGTTCGTCCCTGCCCACCTGGCCTACGGCGACAGAAGCATGGGCGCGCACATCAAGCCCGG TGCCGACCTGACGTTCGAAATAGAACTGCTGGAAGTGCTGACCCGCGACGATTGA
Upstream 100 bases:
>100_bases AACGGGGGAAGCGAAAGCTTCCCCCGTTTTCGTTTCACCGGTTTGTCATGAGGCGGCTTGTCATGAAGCGGCTTTTCTGC GAGAAAGCCCGCTCGCGCCA
Downstream 100 bases:
>100_bases GCAGCTTGCCTTGCAGATCAGCCTGCATCGGCCGATACCCTGACACACAGGCACACGCCTGATTGCTTGTTATCGCAGAA AAAGCCATGCTCCGGGTATG
Product: peptidylprolyl isomerase, FKBP-type
Products: NA
Alternate protein names: Peptidyl-prolyl cis-trans isomerase; PPIase; Rotamase [H]
Number of amino acids: Translated: 124; Mature: 123
Protein sequence:
>124_residues MTERAATGSIAMSKELQITDLHLGEGKAAVKGALITTHYTGTLEDGTVFDSSHERGKPFQCVIGTGRVIKGWDQGLMGMK VGGKRQLFVPAHLAYGDRSMGAHIKPGADLTFEIELLEVLTRDD
Sequences:
>Translated_124_residues MTERAATGSIAMSKELQITDLHLGEGKAAVKGALITTHYTGTLEDGTVFDSSHERGKPFQCVIGTGRVIKGWDQGLMGMK VGGKRQLFVPAHLAYGDRSMGAHIKPGADLTFEIELLEVLTRDD >Mature_123_residues TERAATGSIAMSKELQITDLHLGEGKAAVKGALITTHYTGTLEDGTVFDSSHERGKPFQCVIGTGRVIKGWDQGLMGMKV GGKRQLFVPAHLAYGDRSMGAHIKPGADLTFEIELLEVLTRDD
Specific function: PPIases accelerate the folding of proteins [H]
COG id: COG0545
COG function: function code O; FKBP-type peptidyl-prolyl cis-trans isomerases 1
Gene ontology:
Cell location: Cytoplasm And Periplasmic Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PPIase FKBP-type domain [H]
Homologues:
Organism=Homo sapiens, GI206725530, Length=94, Percent_Identity=53.1914893617021, Blast_Score=103, Evalue=4e-23, Organism=Homo sapiens, GI17149844, Length=94, Percent_Identity=53.1914893617021, Blast_Score=103, Evalue=4e-23, Organism=Homo sapiens, GI17149842, Length=94, Percent_Identity=53.1914893617021, Blast_Score=103, Evalue=4e-23, Organism=Homo sapiens, GI192448443, Length=93, Percent_Identity=46.2365591397849, Blast_Score=89, Evalue=7e-19, Organism=Homo sapiens, GI17149836, Length=105, Percent_Identity=40, Blast_Score=83, Evalue=6e-17, Organism=Homo sapiens, GI4503725, Length=105, Percent_Identity=40, Blast_Score=83, Evalue=6e-17, Organism=Homo sapiens, GI33469985, Length=87, Percent_Identity=45.9770114942529, Blast_Score=82, Evalue=1e-16, Organism=Homo sapiens, GI4503727, Length=97, Percent_Identity=41.2371134020619, Blast_Score=80, Evalue=3e-16, Organism=Homo sapiens, GI8923659, Length=91, Percent_Identity=46.1538461538462, Blast_Score=77, Evalue=3e-15, Organism=Homo sapiens, GI4758380, Length=105, Percent_Identity=38.0952380952381, Blast_Score=75, Evalue=1e-14, Organism=Homo sapiens, GI224809331, Length=92, Percent_Identity=42.3913043478261, Blast_Score=72, Evalue=9e-14, Organism=Homo sapiens, GI206725547, Length=112, Percent_Identity=40.1785714285714, Blast_Score=71, Evalue=2e-13, Organism=Homo sapiens, GI224809329, Length=92, Percent_Identity=42.3913043478261, Blast_Score=70, Evalue=6e-13, Organism=Homo sapiens, GI224809327, Length=92, Percent_Identity=42.3913043478261, Blast_Score=70, Evalue=6e-13, Organism=Homo sapiens, GI4758384, Length=92, Percent_Identity=42.3913043478261, Blast_Score=70, Evalue=6e-13, Organism=Homo sapiens, GI4503729, Length=92, Percent_Identity=42.3913043478261, Blast_Score=69, Evalue=1e-12, Organism=Homo sapiens, GI7706131, Length=95, Percent_Identity=35.7894736842105, Blast_Score=67, Evalue=2e-12, Organism=Homo sapiens, GI31317231, Length=113, Percent_Identity=39.8230088495575, Blast_Score=67, Evalue=3e-12, Organism=Homo sapiens, GI150010552, Length=110, Percent_Identity=39.0909090909091, Blast_Score=67, Evalue=4e-12, Organism=Escherichia coli, GI87082390, Length=105, Percent_Identity=46.6666666666667, Blast_Score=93, Evalue=5e-21, Organism=Escherichia coli, GI1789745, Length=99, Percent_Identity=39.3939393939394, Blast_Score=63, Evalue=5e-12, Organism=Caenorhabditis elegans, GI17540882, Length=114, Percent_Identity=43.859649122807, Blast_Score=92, Evalue=6e-20, Organism=Caenorhabditis elegans, GI71993519, Length=89, Percent_Identity=50.561797752809, Blast_Score=90, Evalue=3e-19, Organism=Caenorhabditis elegans, GI17561782, Length=102, Percent_Identity=43.1372549019608, Blast_Score=80, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17561780, Length=125, Percent_Identity=35.2, Blast_Score=67, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17506167, Length=98, Percent_Identity=37.7551020408163, Blast_Score=67, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17506169, Length=98, Percent_Identity=37.7551020408163, Blast_Score=67, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17561778, Length=107, Percent_Identity=38.3177570093458, Blast_Score=66, Evalue=3e-12, Organism=Saccharomyces cerevisiae, GI6320727, Length=111, Percent_Identity=48.6486486486487, Blast_Score=106, Evalue=9e-25, Organism=Saccharomyces cerevisiae, GI6324194, Length=106, Percent_Identity=49.0566037735849, Blast_Score=105, Evalue=2e-24, Organism=Saccharomyces cerevisiae, GI6323566, Length=102, Percent_Identity=42.156862745098, Blast_Score=86, Evalue=1e-18, Organism=Saccharomyces cerevisiae, GI6323482, Length=102, Percent_Identity=42.156862745098, Blast_Score=84, Evalue=7e-18, Organism=Drosophila melanogaster, GI281363946, Length=118, Percent_Identity=43.2203389830509, Blast_Score=101, Evalue=9e-23, Organism=Drosophila melanogaster, GI17352457, Length=118, Percent_Identity=43.2203389830509, Blast_Score=101, Evalue=9e-23, Organism=Drosophila melanogaster, GI24655568, Length=105, Percent_Identity=45.7142857142857, Blast_Score=99, Evalue=7e-22, Organism=Drosophila melanogaster, GI24647110, Length=104, Percent_Identity=43.2692307692308, Blast_Score=93, Evalue=5e-20, Organism=Drosophila melanogaster, GI21356629, Length=92, Percent_Identity=45.6521739130435, Blast_Score=83, Evalue=3e-17, Organism=Drosophila melanogaster, GI24583150, Length=86, Percent_Identity=44.1860465116279, Blast_Score=73, Evalue=5e-14,
Paralogues:
None
Copy number: 340 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001179 [H]
Pfam domain/function: PF00254 FKBP_C [H]
EC number: =5.2.1.8 [H]
Molecular weight: Translated: 13357; Mature: 13225
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: PS50059 FKBP_PPIASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTERAATGSIAMSKELQITDLHLGEGKAAVKGALITTHYTGTLEDGTVFDSSHERGKPFQ CCCCCCCCCEEECCCEEEEEEEECCCCCEEEEEEEEEEECCCCCCCEEECCCCCCCCCEE CVIGTGRVIKGWDQGLMGMKVGGKRQLFVPAHLAYGDRSMGAHIKPGADLTFEIELLEVL EEEECCEEEECCCCCEEEEEECCCEEEEEEEEEEECCCCCCCEECCCCCEEEEEEEEEEE TRDD CCCC >Mature Secondary Structure TERAATGSIAMSKELQITDLHLGEGKAAVKGALITTHYTGTLEDGTVFDSSHERGKPFQ CCCCCCCCEEECCCEEEEEEEECCCCCEEEEEEEEEEECCCCCCCEEECCCCCCCCCEE CVIGTGRVIKGWDQGLMGMKVGGKRQLFVPAHLAYGDRSMGAHIKPGADLTFEIELLEVL EEEECCEEEECCCCCEEEEEECCCEEEEEEEEEEECCCCCCCEECCCCCEEEEEEEEEEE TRDD CCCC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10761919 [H]