Definition Pseudomonas syringae pv. syringae B728a, complete genome.
Accession NC_007005
Length 6,093,698

Click here to switch to the map view.

The map label for this gene is 66045550

Identifier: 66045550

GI number: 66045550

Start: 2684596

End: 2684904

Strand: Reverse

Name: 66045550

Synonym: Psyr_2310

Alternate gene names: NA

Gene position: 2684904-2684596 (Counterclockwise)

Preceding gene: 66045551

Following gene: 66045549

Centisome position: 44.06

GC content: 50.16

Gene sequence:

>309_bases
ATGAATAGCAAATCATTGATCGCCTGCATGACCTTGCTCGGCTGCTTTTCCGCCGTCACCCTGCCCGTTCACGCAGCAGA
GACGGCGGAACCGAAAGTCAGCGAATCCAAGGACAATGTCCATGAGCTGGAAGTAGGCTCCCGCGTTCCGGAAAAATATC
GCCGCAGCGATCTGGAAGTGAAGGACTGGAAAAGCAAAGGCCTGAAAGAGCCTGCGAAAGAAAGCGAATGGGTAAAAATC
AACGACAAATACGTGCGTTTCCAGAAGGTTAATGGGCAAATGATGGAAATCGTGCCAATCAAGAAGTAA

Upstream 100 bases:

>100_bases
TGAGCACAGCAAACCCGATCGAATGATTTGCAACAGTGAGGGTCCGAGTTATTACGAGGCATTAAGCCATCGCCTTATAC
CAAAGACCGGGAGTCTTCAC

Downstream 100 bases:

>100_bases
GGCTAAGCCTTCTTCGCCGACGCTCTGCGTGAGCATGCCCCATGCGCCGCAGAGCGCCATGCAGGGCATGTCCGGCGCAG
AGCTCGTCTCGATGGTTCCT

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 102; Mature: 102

Protein sequence:

>102_residues
MNSKSLIACMTLLGCFSAVTLPVHAAETAEPKVSESKDNVHELEVGSRVPEKYRRSDLEVKDWKSKGLKEPAKESEWVKI
NDKYVRFQKVNGQMMEIVPIKK

Sequences:

>Translated_102_residues
MNSKSLIACMTLLGCFSAVTLPVHAAETAEPKVSESKDNVHELEVGSRVPEKYRRSDLEVKDWKSKGLKEPAKESEWVKI
NDKYVRFQKVNGQMMEIVPIKK
>Mature_102_residues
MNSKSLIACMTLLGCFSAVTLPVHAAETAEPKVSESKDNVHELEVGSRVPEKYRRSDLEVKDWKSKGLKEPAKESEWVKI
NDKYVRFQKVNGQMMEIVPIKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11592; Mature: 11592

Theoretical pI: Translated: 9.19; Mature: 9.19

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSKSLIACMTLLGCFSAVTLPVHAAETAEPKVSESKDNVHELEVGSRVPEKYRRSDLEV
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHCCCCC
KDWKSKGLKEPAKESEWVKINDKYVRFQKVNGQMMEIVPIKK
CHHHHCCCCCCCCCCCEEEECCEEEEEEECCCCEEEEEECCC
>Mature Secondary Structure
MNSKSLIACMTLLGCFSAVTLPVHAAETAEPKVSESKDNVHELEVGSRVPEKYRRSDLEV
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHCCCCC
KDWKSKGLKEPAKESEWVKINDKYVRFQKVNGQMMEIVPIKK
CHHHHCCCCCCCCCCCEEEECCEEEEEEECCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA