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The map label for this gene is 66045461

Identifier: 66045461

GI number: 66045461

Start: 2581832

End: 2582404

Strand: Reverse

Name: 66045461

Synonym: Psyr_2221

Alternate gene names: NA

Gene position: 2582404-2581832 (Counterclockwise)

Preceding gene: 66045462

Following gene: 66045460

Centisome position: 42.38

GC content: 63.53

Gene sequence:

>573_bases
ATGACCAGCCTTATCCAGAACAGTCCTGTCGGCGCCAACCCGCGGGCCTTATGCACACTGCAAGACCTGACCGATCGGCC
ACGCGTGGGATTTCGCGGCACGCAAAGCGCTGACTACCTGACGGCACGCGGTTTCAGCCTGCCCGAGGCACCGAACCGCG
CCGTCACACAGGCGGACGGCAGCCATGTCGCACGCCTTTCGCAGACCGAATACCTGCTGCTGGGCAGCCCGCTCGATGAC
GGGCAGCGCATCGCCGATGAAGAAGCTCGCTGGGAGCTGGACCACAGCGCCAACTACCTGCTGCCGCGCGAAGACAGCCA
TGCCTGGCTGCAACTGAGTGGCGAGTGTATCGCCGAGGTGATGGCCAAACTGTGTGGCGTGGATCTGCGCCCGGGGGCTT
TCGCTCCCGGTTCGGTGGCGCAGACCTCGGCAGCGCGTATCAATGTGATCGTCATCAACCTCGGCGCGCAGGCCGAACCC
TGCTTCCAGATCCTCTTTGACCGGGCTTCACTGGCTTACTTCAAGGACGCGATGCTGGATGCCATGACCGAGTTTGGAGG
GCGCTACCTATGA

Upstream 100 bases:

>100_bases
GCAGATTCCGATCCGCGTCGAAGACGGTGTGGTGGTTCAGGCAACCGTCGTCAAACTGCCGTTCTTCGACCCTGAAAACC
AGCGCCAGGAGCTCTGACCC

Downstream 100 bases:

>100_bases
ACAACAGGTTACTGCATCAGTGAGCAAAGGTCGTTTCGTGCTCATGAACGACAACAAGTGTCTGTTACCGCCACGCCGCC
TAAAGAATGCTGGCATAAAG

Product: sarcosine oxidase, gamma subunit

Products: NA

Alternate protein names: Sarcosine Oxidase Gamma Subunit Protein; Sarcosine Oxidase Gamma Subunit Family Protein; Sarcosine Oxidase Subunit Gamma

Number of amino acids: Translated: 190; Mature: 189

Protein sequence:

>190_residues
MTSLIQNSPVGANPRALCTLQDLTDRPRVGFRGTQSADYLTARGFSLPEAPNRAVTQADGSHVARLSQTEYLLLGSPLDD
GQRIADEEARWELDHSANYLLPREDSHAWLQLSGECIAEVMAKLCGVDLRPGAFAPGSVAQTSAARINVIVINLGAQAEP
CFQILFDRASLAYFKDAMLDAMTEFGGRYL

Sequences:

>Translated_190_residues
MTSLIQNSPVGANPRALCTLQDLTDRPRVGFRGTQSADYLTARGFSLPEAPNRAVTQADGSHVARLSQTEYLLLGSPLDD
GQRIADEEARWELDHSANYLLPREDSHAWLQLSGECIAEVMAKLCGVDLRPGAFAPGSVAQTSAARINVIVINLGAQAEP
CFQILFDRASLAYFKDAMLDAMTEFGGRYL
>Mature_189_residues
TSLIQNSPVGANPRALCTLQDLTDRPRVGFRGTQSADYLTARGFSLPEAPNRAVTQADGSHVARLSQTEYLLLGSPLDDG
QRIADEEARWELDHSANYLLPREDSHAWLQLSGECIAEVMAKLCGVDLRPGAFAPGSVAQTSAARINVIVINLGAQAEPC
FQILFDRASLAYFKDAMLDAMTEFGGRYL

Specific function: Unknown

COG id: COG4583

COG function: function code E; Sarcosine oxidase gamma subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20658; Mature: 20526

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSLIQNSPVGANPRALCTLQDLTDRPRVGFRGTQSADYLTARGFSLPEAPNRAVTQADG
CCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEECCCC
SHVARLSQTEYLLLGSPLDDGQRIADEEARWELDHSANYLLPREDSHAWLQLSGECIAEV
CHHHHHCCCCEEEEECCCCCCHHHCCCHHHEEECCCCCEECCCCCCCEEEEECHHHHHHH
MAKLCGVDLRPGAFAPGSVAQTSAARINVIVINLGAQAEPCFQILFDRASLAYFKDAMLD
HHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
AMTEFGGRYL
HHHHHCCCCC
>Mature Secondary Structure 
TSLIQNSPVGANPRALCTLQDLTDRPRVGFRGTQSADYLTARGFSLPEAPNRAVTQADG
CCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEECCCC
SHVARLSQTEYLLLGSPLDDGQRIADEEARWELDHSANYLLPREDSHAWLQLSGECIAEV
CHHHHHCCCCEEEEECCCCCCHHHCCCHHHEEECCCCCEECCCCCCCEEEEECHHHHHHH
MAKLCGVDLRPGAFAPGSVAQTSAARINVIVINLGAQAEPCFQILFDRASLAYFKDAMLD
HHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
AMTEFGGRYL
HHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA