| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66045458
Identifier: 66045458
GI number: 66045458
Start: 2577712
End: 2578587
Strand: Reverse
Name: 66045458
Synonym: Psyr_2218
Alternate gene names: NA
Gene position: 2578587-2577712 (Counterclockwise)
Preceding gene: 66045460
Following gene: 66045457
Centisome position: 42.32
GC content: 61.07
Gene sequence:
>876_bases ATGTCGCGTAAATCCATGCTTGCCCTGTCCTTCGCTGCTCTGTTCCCTCTCGCAGCCCAGGCCGCCGCCCCCTTGGCCAT CGAGGTGTACAACCCGGCTGAAAAAGCCGTCTTCCCGGTGTCATCCGAACTGATCATCGGCAAGCATGACGCGGTGCTCA TCGATGCGCAGTTCCAGCGCAACGACGCCGAGGCCCTGGTGCAAAAGATCAAGGCCAGCGGCAAGCAACTCACCACGGTC TACATCAGCCACAGTGACCCGGACTACTACTTCGGTCTGGACGTCATCAAAGCCGCGTTCCCCGAAGCGAAGATCGTCGC CAGCACGCCTACCGTGAAGGCGATCAAGGCGTCGATGCAGGGCAAACTCGCCTACTGGGGCCCGATTCTCAAGGACAATG CGCCAGCCAGCCTGGTTGTGCCGGAAGTACTCAAGGGCGACCACCTGACGCTTGAAGGCCAACCGTTGCAGATCAAAGGC CTGAACGGCCCGGCCCCCGAGCGCAGCTACGTATGGATTCCCTCCCTCAAGGCGGTAGTCGGTGGTGTCGTGGTCTCCAG CGGCATCCATGTCTGGATCGCTGACACGCAAAGCACGAAATCGCGTCAGGACTGGCTCGCGACACTCAAGGGCATCGAGG CGCTGAAACCGGCCACCGTGATTCCGGGTCATTATCTGGGCGAGATCCCGTCAGGCACCCAGGCCGTGACGTTCACCGCC GACTACCTGAAGTCCTTCGAAGAACAGGCCACCAAGGCCAAGGATTCCGCCGCCCTGATCGACGCCATGCAGAAAGCCTG GCCGCAACTGGCCGAGCCGGCTTCGCTGGAGATGAGCGCAAAAGTCATCAAGGGCGAGATGAAGTGGCCGAATTGA
Upstream 100 bases:
>100_bases CGATATAAGCAATCAATAGTTGCCAATACTGAGGCTTTTGTTTCACCTGAGGCAACTTAAGATAACCACCTCAGTCCTGC CCGAACCAAGGTCATACCCC
Downstream 100 bases:
>100_bases TCCGGCACCTGTAAGGCCCCGGCGGAGCGCTGCGAATATCGGCAGGGGCCAGGCTTTTTAACTGCGCGGCGCATATGCAC TCAGCTATGGTCAGACGCCC
Product: Beta-lactamase-like
Products: NA
Alternate protein names: Metallo-Beta-Lactamase Superfamily Protein; Zn-Dependent Hydrolase; Beta-Lactamase Domain Protein; Metallo-Beta-Lactamase Family Protein; Beta-Lactamase-Like; Zn-Dependent Hydrolase Including Glyoxylase; Metallo-Beta-Lactamase; Beta-Lactamase Class B; Twin-Arginine Translocation Pathway Signal; Beta-Lactamase Family Protein; Metallo-Beta-Lactamase Protein; Signal Peptide; Beta-Lactamase-Like Protein; Beta-Lactamase; Exported Metallo-Beta-Lactamase Superfamily Protein; Hydrolase
Number of amino acids: Translated: 291; Mature: 290
Protein sequence:
>291_residues MSRKSMLALSFAALFPLAAQAAAPLAIEVYNPAEKAVFPVSSELIIGKHDAVLIDAQFQRNDAEALVQKIKASGKQLTTV YISHSDPDYYFGLDVIKAAFPEAKIVASTPTVKAIKASMQGKLAYWGPILKDNAPASLVVPEVLKGDHLTLEGQPLQIKG LNGPAPERSYVWIPSLKAVVGGVVVSSGIHVWIADTQSTKSRQDWLATLKGIEALKPATVIPGHYLGEIPSGTQAVTFTA DYLKSFEEQATKAKDSAALIDAMQKAWPQLAEPASLEMSAKVIKGEMKWPN
Sequences:
>Translated_291_residues MSRKSMLALSFAALFPLAAQAAAPLAIEVYNPAEKAVFPVSSELIIGKHDAVLIDAQFQRNDAEALVQKIKASGKQLTTV YISHSDPDYYFGLDVIKAAFPEAKIVASTPTVKAIKASMQGKLAYWGPILKDNAPASLVVPEVLKGDHLTLEGQPLQIKG LNGPAPERSYVWIPSLKAVVGGVVVSSGIHVWIADTQSTKSRQDWLATLKGIEALKPATVIPGHYLGEIPSGTQAVTFTA DYLKSFEEQATKAKDSAALIDAMQKAWPQLAEPASLEMSAKVIKGEMKWPN >Mature_290_residues SRKSMLALSFAALFPLAAQAAAPLAIEVYNPAEKAVFPVSSELIIGKHDAVLIDAQFQRNDAEALVQKIKASGKQLTTVY ISHSDPDYYFGLDVIKAAFPEAKIVASTPTVKAIKASMQGKLAYWGPILKDNAPASLVVPEVLKGDHLTLEGQPLQIKGL NGPAPERSYVWIPSLKAVVGGVVVSSGIHVWIADTQSTKSRQDWLATLKGIEALKPATVIPGHYLGEIPSGTQAVTFTAD YLKSFEEQATKAKDSAALIDAMQKAWPQLAEPASLEMSAKVIKGEMKWPN
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31231; Mature: 31100
Theoretical pI: Translated: 8.68; Mature: 8.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRKSMLALSFAALFPLAAQAAAPLAIEVYNPAEKAVFPVSSELIIGKHDAVLIDAQFQR CCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHCEECCCCCEEEECCCEEEEEECCCC NDAEALVQKIKASGKQLTTVYISHSDPDYYFGLDVIKAAFPEAKIVASTPTVKAIKASMQ CCHHHHHHHHHCCCCEEEEEEEECCCCCEEEHHHHHHHCCCCCEEEECCCCHHHHHHHHC GKLAYWGPILKDNAPASLVVPEVLKGDHLTLEGQPLQIKGLNGPAPERSYVWIPSLKAVV CCEEECCCCCCCCCCCEEECHHHHCCCEEEECCCCEEEECCCCCCCCCCEEECCCHHHHH GGVVVSSGIHVWIADTQSTKSRQDWLATLKGIEALKPATVIPGHYLGEIPSGTQAVTFTA HHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCEECCCHHHCCCCCCCEEEEEEH DYLKSFEEQATKAKDSAALIDAMQKAWPQLAEPASLEMSAKVIKGEMKWPN HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCC >Mature Secondary Structure SRKSMLALSFAALFPLAAQAAAPLAIEVYNPAEKAVFPVSSELIIGKHDAVLIDAQFQR CCHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHCEECCCCCEEEECCCEEEEEECCCC NDAEALVQKIKASGKQLTTVYISHSDPDYYFGLDVIKAAFPEAKIVASTPTVKAIKASMQ CCHHHHHHHHHCCCCEEEEEEEECCCCCEEEHHHHHHHCCCCCEEEECCCCHHHHHHHHC GKLAYWGPILKDNAPASLVVPEVLKGDHLTLEGQPLQIKGLNGPAPERSYVWIPSLKAVV CCEEECCCCCCCCCCCEEECHHHHCCCEEEECCCCEEEECCCCCCCCCCEEECCCHHHHH GGVVVSSGIHVWIADTQSTKSRQDWLATLKGIEALKPATVIPGHYLGEIPSGTQAVTFTA HHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCEECCCHHHCCCCCCCEEEEEEH DYLKSFEEQATKAKDSAALIDAMQKAWPQLAEPASLEMSAKVIKGEMKWPN HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA