| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is fecR [C]
Identifier: 66045382
GI number: 66045382
Start: 2500866
End: 2501894
Strand: Reverse
Name: fecR [C]
Synonym: Psyr_2142
Alternate gene names: 66045382
Gene position: 2501894-2500866 (Counterclockwise)
Preceding gene: 66045387
Following gene: 66045381
Centisome position: 41.06
GC content: 61.9
Gene sequence:
>1029_bases ATGAGCGACCCTCTTTTCAGCAAGGCAGAACACGACGCGATCACCGATGCCGCTGCGCATTGGTGCATGCGCCTGCATGC AGAAGACTGTACCGCAGCAGAACGGAAAGCATTCGAGCAATGGCTGAAGGCCCACCCCCTGCATGCGATCGAATACAACG CCATGCTGGAAGTCTGGGACATCACCGGACAAATCGAACCGCTCAACCCGCCACCTGCGCGCCAAACCCAGGCTGCCCTG CCCGATCACGTTCGGCCTCGTCGCGGTCGCCGCTGGGCAAAACTGGCCACAGCCGCAGCGGTCGTTGCTCTGGCACTGCC GATCGCCGGGTATGTCGGCTGGCATCAGGGCTGGCTGCCTGACGCCTACGAAACTTACAACGCCGACACCGCCACACGCC TGGTCATGCTGGAAGACGGCAGCCGCGCCGAGCTGAACCTGGGTACCGAGCTGACCTACGCCAATTACCGGGATCGACGC AGCGTCACGCTGACAAAGGGCGAGGCGTTCTTTGAGGTCAGCCACGACAGCTCGCACCCTTTTGTGGTCGATGCCGGCGC AGGCAGCATCAGGGTCACCGGCACACGCTTCAACGTATGGATGTATCAGGATCAGGTACGCGTGACGCTGGTCGAGGGTT CGGTTCAGATCAACAGTGATCGTGCACATCCTTCTTCGAGCCACGCCCTGGCCCCCGGCATGCAGGCCAGTTACAAGGCA GGCGACGACGCTCCACTGATCAGCCAGACCGAAGCACGCGATACCAGCCTGGCGTGGCGCAATGGCAAGCTGATCTTCAA TGACCTGCCGCTCAGCCAGGCACTGCCGTTGATCAATCGCTACCTGCAAACCCCCATTCTGCTGGCGGACAGTGCAACCG GAGCCATGCGCCTGGGCGGCAGTTACAACACTCACGACCTGTCGAGCCTGCTGGGCTCTCTGCCCAAGGTGTTGCCGGTG TATGTGACGCAGAATCAGAACGGCAACCCGGTACTCAACCGTCGCACCGCCGACGCTCCGAAAGGCTGA
Upstream 100 bases:
>100_bases CCAGAAAATACGCAGCACCTTCATGGGCAATGGCCTGCAAATGTTCTCTCTGCTTGAAATCAAAGGGTAGAATGCGCCGA AGGTATAGGCTGGAGCGCCC
Downstream 100 bases:
>100_bases TCGCACTCGCGGTCTTGCTGACGCGCGGTAATTTCGGCTGCGCCCATCGTCGGAACGATCTCTTCTCGCGCCCGTCGATT CTTCATCTAACCTCAAGCGC
Product: FecR protein
Products: NA
Alternate protein names: FecR Protein; Sigma Factor Regulatory Protein FecR/PupR Family; Transmembrane Sensor; FecR Family Protein; Anti-Sigma Factor; Anti-Feci Sigma Factor Fecr; Regulatory Protein; Fe2+-Dicitrate Sensor Membrane Component; FecR Iron Siderophore Sensor Protein; FecR-Like Transmembrane Sensor; Transcriptional Regulator; Two Component Sensor Kinase; Anti-Sigma Factor FecR Family; Ferric Citrate Sensor FecR; Inner Membrane Sensor For Iron Transport; Transmembrane Sensor Protein; Sigma Factor Regulatory Protein FecR; Anti-Sigma Factor Protein FecR Family; Iron Transport-Sensory Transduction Protein; Two-Component System Sensor Protein; Anti-FecI Sigma Factor; CytoChrome C Oxidase Cbb3-Type Subunit I; Iron(III) Dicitrate Sensor Protein; Transmembrane Protein; FecR Protein Superfamily Protein; Anti-Sigma Factor FecR-Like Protein; Iron Siderophore Sensor Protein; Tat Pathway Signal Sequence Domain-Containing Protein; Protein FecR; Anti Sigma Factor; FecR Family Transmembrane Sensor Protein; Fe2+-Dicitrate Sensor Membrane Protein; FecR Family; IRON Transport Regulator Transmembrane Protein; Iron Acquisition-Like Protein; Fe2+-Dicitrate Sensor; Iron Transporter-Like Protein; IRON Transport-Sensory Transduction Transmembrane Protein; Iron-Dicitrate Sensor Membrane Component; Regulator Of Iron Dicitrate Transport; Transcriptional Regulator Putative; Transmembrane Sensor/Regulatory Protein; Iron Sensor; FecR Iron Sensor Protein; Iron Uptake Transcriptional Regulator Protein; FecR-Like Transcriptional Regulator; Iron Dicitrate Transmembrane Sensor FecR
Number of amino acids: Translated: 342; Mature: 341
Protein sequence:
>342_residues MSDPLFSKAEHDAITDAAAHWCMRLHAEDCTAAERKAFEQWLKAHPLHAIEYNAMLEVWDITGQIEPLNPPPARQTQAAL PDHVRPRRGRRWAKLATAAAVVALALPIAGYVGWHQGWLPDAYETYNADTATRLVMLEDGSRAELNLGTELTYANYRDRR SVTLTKGEAFFEVSHDSSHPFVVDAGAGSIRVTGTRFNVWMYQDQVRVTLVEGSVQINSDRAHPSSSHALAPGMQASYKA GDDAPLISQTEARDTSLAWRNGKLIFNDLPLSQALPLINRYLQTPILLADSATGAMRLGGSYNTHDLSSLLGSLPKVLPV YVTQNQNGNPVLNRRTADAPKG
Sequences:
>Translated_342_residues MSDPLFSKAEHDAITDAAAHWCMRLHAEDCTAAERKAFEQWLKAHPLHAIEYNAMLEVWDITGQIEPLNPPPARQTQAAL PDHVRPRRGRRWAKLATAAAVVALALPIAGYVGWHQGWLPDAYETYNADTATRLVMLEDGSRAELNLGTELTYANYRDRR SVTLTKGEAFFEVSHDSSHPFVVDAGAGSIRVTGTRFNVWMYQDQVRVTLVEGSVQINSDRAHPSSSHALAPGMQASYKA GDDAPLISQTEARDTSLAWRNGKLIFNDLPLSQALPLINRYLQTPILLADSATGAMRLGGSYNTHDLSSLLGSLPKVLPV YVTQNQNGNPVLNRRTADAPKG >Mature_341_residues SDPLFSKAEHDAITDAAAHWCMRLHAEDCTAAERKAFEQWLKAHPLHAIEYNAMLEVWDITGQIEPLNPPPARQTQAALP DHVRPRRGRRWAKLATAAAVVALALPIAGYVGWHQGWLPDAYETYNADTATRLVMLEDGSRAELNLGTELTYANYRDRRS VTLTKGEAFFEVSHDSSHPFVVDAGAGSIRVTGTRFNVWMYQDQVRVTLVEGSVQINSDRAHPSSSHALAPGMQASYKAG DDAPLISQTEARDTSLAWRNGKLIFNDLPLSQALPLINRYLQTPILLADSATGAMRLGGSYNTHDLSSLLGSLPKVLPVY VTQNQNGNPVLNRRTADAPKG
Specific function: Regulation Of Iron Dicitrate Transport. In The Absence Of Citrate Fecr Inactivates Feci. Fecr Is Probably A Sensor That Recognizes Iron Dicitrate In The Periplasm. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37586; Mature: 37454
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDPLFSKAEHDAITDAAAHWCMRLHAEDCTAAERKAFEQWLKAHPLHAIEYNAMLEVWD CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEECCCEEEEEE ITGQIEPLNPPPARQTQAALPDHVRPRRGRRWAKLATAAAVVALALPIAGYVGWHQGWLP CCCEEECCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC DAYETYNADTATRLVMLEDGSRAELNLGTELTYANYRDRRSVTLTKGEAFFEVSHDSSHP CHHHHCCCCCEEEEEEEECCCCCEEECCCEEEECCCCCCCEEEEECCCEEEEECCCCCCC FVVDAGAGSIRVTGTRFNVWMYQDQVRVTLVEGSVQINSDRAHPSSSHALAPGMQASYKA EEEECCCCEEEEEEEEEEEEEEECCEEEEEEECEEEECCCCCCCCCCCCCCCCCCCCCCC GDDAPLISQTEARDTSLAWRNGKLIFNDLPLSQALPLINRYLQTPILLADSATGAMRLGG CCCCCCCCCCCCCCCEEEEECCCEEEECCCHHHHHHHHHHHHCCCEEEECCCCCEEEECC SYNTHDLSSLLGSLPKVLPVYVTQNQNGNPVLNRRTADAPKG CCCHHHHHHHHHCCCCCEEEEEEECCCCCEEECCCCCCCCCC >Mature Secondary Structure SDPLFSKAEHDAITDAAAHWCMRLHAEDCTAAERKAFEQWLKAHPLHAIEYNAMLEVWD CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEECCCEEEEEE ITGQIEPLNPPPARQTQAALPDHVRPRRGRRWAKLATAAAVVALALPIAGYVGWHQGWLP CCCEEECCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC DAYETYNADTATRLVMLEDGSRAELNLGTELTYANYRDRRSVTLTKGEAFFEVSHDSSHP CHHHHCCCCCEEEEEEEECCCCCEEECCCEEEECCCCCCCEEEEECCCEEEEECCCCCCC FVVDAGAGSIRVTGTRFNVWMYQDQVRVTLVEGSVQINSDRAHPSSSHALAPGMQASYKA EEEECCCCEEEEEEEEEEEEEEECCEEEEEEECEEEECCCCCCCCCCCCCCCCCCCCCCC GDDAPLISQTEARDTSLAWRNGKLIFNDLPLSQALPLINRYLQTPILLADSATGAMRLGG CCCCCCCCCCCCCCCEEEEECCCEEEECCCHHHHHHHHHHHHCCCEEEECCCCCEEEECC SYNTHDLSSLLGSLPKVLPVYVTQNQNGNPVLNRRTADAPKG CCCHHHHHHHHHCCCCCEEEEEEECCCCCEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA