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The map label for this gene is fimB [H]

Identifier: 66045278

GI number: 66045278

Start: 2367444

End: 2368190

Strand: Reverse

Name: fimB [H]

Synonym: Psyr_2038

Alternate gene names: 66045278

Gene position: 2368190-2367444 (Counterclockwise)

Preceding gene: 66045279

Following gene: 66045277

Centisome position: 38.86

GC content: 56.22

Gene sequence:

>747_bases
ATGATTTGCCAACAGGCTTTCAAAAGACCTGCCCTCGCGGGGTGCATGCTGTTATTCATGTGCGCAGCTTATATACCAGC
CAGTCAGGCAGCACTGACGGTCAACGCAACTCGCATCGTGTTCGACGGCGACAAGCGCAGTACGTCGGTGGTCATATCCA
ATCCAAGTGATCGCCCGTTCGCGGTACAGACCTGGGTAAATACGGAGGCAGACGACACTGTCACCGTCGTTCCGTTCGCA
CCTTCGCCGCCACTTTTCCGCCTTAATCCGGGCAAGGAACAACAGGTACAGATCAATGGCCTGCCCCACGAACTGCCCTC
TGATCGCGAATCATTGTTCTACTTCAACGTGCAGGAAATACCTCAAGCCGACCCTTCGCAGGGCAACGTACTGAATATTG
CCCTGCGTACCCGTATCAAACTGTTTTATCGCCCGGTGCTGCTGACTGATAACCCCATTGCCCGCCTCAAGGACCTGCAA
TGGTCGGTCAGGCAGATTGCGGGCAAGGCAGAACTGACCGCGATGAATCCGACACCCTTTCACGTGTCGTTCATTCGCCT
CGACGTCTCCGGCGGTGGCAGAACTGAAAAAGTCAGGGAAGTCGCCATGCTTGGCCCGTTCAGCTCTCGCCATTACGAGC
TCAGTGAAACGAAAGCGGTACCGGGCCTGCAGGTGGTGTTTTCCGCGATCAACGATTACGGCGGCTACAGCACGCCGCTG
ACAGCTACAGCCACGCTGACTGACTGA

Upstream 100 bases:

>100_bases
ACCCATTCGCTCACAGTGTAAGAATCAATAGTCTTTTCACGTGAAGCATCTTCAATACGTTCAGGTCCGTTTCGGATCTG
AACGTACAAGGTAACTTTCC

Downstream 100 bases:

>100_bases
AACAGCGCTGGCCCGTTTCATCCCCAGGACATTGAACATGACCCTATTACCCGATTCCGGGTTCATACCAGTGCGCCTGC
GCTTTATGCAGGTGCTGATT

Product: pili assembly chaperone: pili assembly chaperone

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MICQQAFKRPALAGCMLLFMCAAYIPASQAALTVNATRIVFDGDKRSTSVVISNPSDRPFAVQTWVNTEADDTVTVVPFA
PSPPLFRLNPGKEQQVQINGLPHELPSDRESLFYFNVQEIPQADPSQGNVLNIALRTRIKLFYRPVLLTDNPIARLKDLQ
WSVRQIAGKAELTAMNPTPFHVSFIRLDVSGGGRTEKVREVAMLGPFSSRHYELSETKAVPGLQVVFSAINDYGGYSTPL
TATATLTD

Sequences:

>Translated_248_residues
MICQQAFKRPALAGCMLLFMCAAYIPASQAALTVNATRIVFDGDKRSTSVVISNPSDRPFAVQTWVNTEADDTVTVVPFA
PSPPLFRLNPGKEQQVQINGLPHELPSDRESLFYFNVQEIPQADPSQGNVLNIALRTRIKLFYRPVLLTDNPIARLKDLQ
WSVRQIAGKAELTAMNPTPFHVSFIRLDVSGGGRTEKVREVAMLGPFSSRHYELSETKAVPGLQVVFSAINDYGGYSTPL
TATATLTD
>Mature_248_residues
MICQQAFKRPALAGCMLLFMCAAYIPASQAALTVNATRIVFDGDKRSTSVVISNPSDRPFAVQTWVNTEADDTVTVVPFA
PSPPLFRLNPGKEQQVQINGLPHELPSDRESLFYFNVQEIPQADPSQGNVLNIALRTRIKLFYRPVLLTDNPIARLKDLQ
WSVRQIAGKAELTAMNPTPFHVSFIRLDVSGGGRTEKVREVAMLGPFSSRHYELSETKAVPGLQVVFSAINDYGGYSTPL
TATATLTD

Specific function: Required for the biogenesis of the filamentous hemagglutinin and the fimbria [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Ig-like (immunoglobulin-like) domain [H]

Homologues:

Organism=Escherichia coli, GI1786333, Length=236, Percent_Identity=34.7457627118644, Blast_Score=137, Evalue=8e-34,
Organism=Escherichia coli, GI1789532, Length=227, Percent_Identity=32.15859030837, Blast_Score=112, Evalue=3e-26,
Organism=Escherichia coli, GI1790771, Length=235, Percent_Identity=32.3404255319149, Blast_Score=108, Evalue=3e-25,
Organism=Escherichia coli, GI1787171, Length=220, Percent_Identity=31.8181818181818, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI1786936, Length=215, Percent_Identity=33.0232558139535, Blast_Score=102, Evalue=2e-23,
Organism=Escherichia coli, GI1788677, Length=154, Percent_Identity=37.012987012987, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI87082203, Length=240, Percent_Identity=31.6666666666667, Blast_Score=92, Evalue=4e-20,
Organism=Escherichia coli, GI1788428, Length=140, Percent_Identity=33.5714285714286, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI1786743, Length=227, Percent_Identity=31.7180616740088, Blast_Score=89, Evalue=2e-19,
Organism=Escherichia coli, GI87081806, Length=233, Percent_Identity=29.1845493562232, Blast_Score=87, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008962
- InterPro:   IPR001829
- InterPro:   IPR016148
- InterPro:   IPR018046
- InterPro:   IPR016147 [H]

Pfam domain/function: PF02753 Pili_assembly_C; PF00345 Pili_assembly_N [H]

EC number: NA

Molecular weight: Translated: 27283; Mature: 27283

Theoretical pI: Translated: 8.05; Mature: 8.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MICQQAFKRPALAGCMLLFMCAAYIPASQAALTVNATRIVFDGDKRSTSVVISNPSDRPF
CCCHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCCEEEEEECCCCCCE
AVQTWVNTEADDTVTVVPFAPSPPLFRLNPGKEQQVQINGLPHELPSDRESLFYFNVQEI
EEEEEECCCCCCEEEEEEECCCCCEEEECCCCCCEEEECCCCCCCCCCCCEEEEEEHHHC
PQADPSQGNVLNIALRTRIKLFYRPVLLTDNPIARLKDLQWSVRQIAGKAELTAMNPTPF
CCCCCCCCCEEEEEEHHEEEEEEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEEECCCCE
HVSFIRLDVSGGGRTEKVREVAMLGPFSSRHYELSETKAVPGLQVVFSAINDYGGYSTPL
EEEEEEEEECCCCCHHHHHHHHHCCCCCCCCEECHHHCCCCHHHHHHHHHHHCCCCCCCC
TATATLTD
EEEEEECC
>Mature Secondary Structure
MICQQAFKRPALAGCMLLFMCAAYIPASQAALTVNATRIVFDGDKRSTSVVISNPSDRPF
CCCHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCCEEEEEECCCCCCE
AVQTWVNTEADDTVTVVPFAPSPPLFRLNPGKEQQVQINGLPHELPSDRESLFYFNVQEI
EEEEEECCCCCCEEEEEEECCCCCEEEECCCCCCEEEECCCCCCCCCCCCEEEEEEHHHC
PQADPSQGNVLNIALRTRIKLFYRPVLLTDNPIARLKDLQWSVRQIAGKAELTAMNPTPF
CCCCCCCCCEEEEEEHHEEEEEEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEEECCCCE
HVSFIRLDVSGGGRTEKVREVAMLGPFSSRHYELSETKAVPGLQVVFSAINDYGGYSTPL
EEEEEEEEECCCCCHHHHHHHHHCCCCCCCCEECHHHCCCCHHHHHHHHHHHCCCCCCCC
TATATLTD
EEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1360139; 1354611; 12910271 [H]