| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66045173
Identifier: 66045173
GI number: 66045173
Start: 2205928
End: 2206392
Strand: Reverse
Name: 66045173
Synonym: Psyr_1933
Alternate gene names: NA
Gene position: 2206392-2205928 (Counterclockwise)
Preceding gene: 66045175
Following gene: 66045172
Centisome position: 36.21
GC content: 55.7
Gene sequence:
>465_bases ATGGCGGCAGATCGAACTCTGCAGGGACGCAGCATGAGCCGCACAGGAGCGCGTGACAGAGCGCGCAGGCAACTTACCGA GACGATCGCAGTATTGAGCGACAGCGTGGCCTTGCTCGGTAAGTCACACACACTGGTCAGGAATGTCGGCACTCCAGATG CAACTCAATACCTTGCAGATTTGGATGCCTTTTGCGCCCGTCTCTTTCCTGGCCAAGTACACCAACACCCCGATAATTTG GCCGTCGACAACTTCGCTGCAGCCATGAAAACAAAGCTAGCCGAAGCTCGCGCTAAAGGTCTTCGTGGCTGGAGTGAAAC CAGGGTGCAGGATAGAACGCTGGTAGAGATGTTGGTCGGGCCATATTCCCAAGGGAAACCCTGGCGACTTCGAGGACATC GCCAACTTTGCGATGATGCTTCATCAGCGCGATGCCCACCCTCGGGAACTGACATTCGCCTATAA
Upstream 100 bases:
>100_bases GCGCCGACGGCAAGCCATTCACCAAGACCCAGCAGGTGCACATGTGCGGCAACAGCGTCAGCCCTCCGCCGATGGCCGCA CTTGCCAAAGCAAACGACCC
Downstream 100 bases:
>100_bases CGCGATGCTCAGCACAATTCCAACCAGACGGGTTCAGAGCGGGCCCAGTAACACGGCCACGCCCAACACAGCGATGGCTA AAGAGCGCCCAATACTATTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 154; Mature: 153
Protein sequence:
>154_residues MAADRTLQGRSMSRTGARDRARRQLTETIAVLSDSVALLGKSHTLVRNVGTPDATQYLADLDAFCARLFPGQVHQHPDNL AVDNFAAAMKTKLAEARAKGLRGWSETRVQDRTLVEMLVGPYSQGKPWRLRGHRQLCDDASSARCPPSGTDIRL
Sequences:
>Translated_154_residues MAADRTLQGRSMSRTGARDRARRQLTETIAVLSDSVALLGKSHTLVRNVGTPDATQYLADLDAFCARLFPGQVHQHPDNL AVDNFAAAMKTKLAEARAKGLRGWSETRVQDRTLVEMLVGPYSQGKPWRLRGHRQLCDDASSARCPPSGTDIRL >Mature_153_residues AADRTLQGRSMSRTGARDRARRQLTETIAVLSDSVALLGKSHTLVRNVGTPDATQYLADLDAFCARLFPGQVHQHPDNLA VDNFAAAMKTKLAEARAKGLRGWSETRVQDRTLVEMLVGPYSQGKPWRLRGHRQLCDDASSARCPPSGTDIRL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16941; Mature: 16810
Theoretical pI: Translated: 10.44; Mature: 10.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAADRTLQGRSMSRTGARDRARRQLTETIAVLSDSVALLGKSHTLVRNVGTPDATQYLAD CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHH LDAFCARLFPGQVHQHPDNLAVDNFAAAMKTKLAEARAKGLRGWSETRVQDRTLVEMLVG HHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHC PYSQGKPWRLRGHRQLCDDASSARCPPSGTDIRL CCCCCCCEEECCCHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure AADRTLQGRSMSRTGARDRARRQLTETIAVLSDSVALLGKSHTLVRNVGTPDATQYLAD CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHH LDAFCARLFPGQVHQHPDNLAVDNFAAAMKTKLAEARAKGLRGWSETRVQDRTLVEMLVG HHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHC PYSQGKPWRLRGHRQLCDDASSARCPPSGTDIRL CCCCCCCEEECCCHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA