| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is resE [H]
Identifier: 66045159
GI number: 66045159
Start: 2191553
End: 2192686
Strand: Direct
Name: resE [H]
Synonym: Psyr_1918
Alternate gene names: 66045159
Gene position: 2191553-2192686 (Clockwise)
Preceding gene: 66045158
Following gene: 66045162
Centisome position: 35.96
GC content: 58.2
Gene sequence:
>1134_bases ATGGCTATGCGGTTATCAGGCTTCATCCTCGACAACATCGAGCCTATCGTGCGCGAGTGGACCGATTTCGCACGCACCCT GTCCGCGCTCGGCGAGCCTCTGGATACCACGGAGCTCAGAGACCATGCCGAGCAAATGCTGCGGGCTATCGCCGCTGATC TGCAAACGGATCAGTCGTTGCAGCAACAGGTCGACAAATCGCAGGGCCACGGTGTGTCAAATGAACAGACCGCAGCGAAA AGCCATGCGATCACTCGATTGATGTCGGGCTTCACCATCGATCAGGTGGTCTCGGAGTTTCGGGCATTACGGGCGAGCGT GATCAAACAGTGGATGTCGCGAGAGGCGCTGGACACTCAACAGCAGATCGAAGACATGATCCGTTTCAACGAGGCGATAG ATCAGGCCCTGGCCGAGTCTATCTCCAGCTATACCAGCGCGATCCAGGCGTCACGCAACATCTTTCTGGGCATTCTCGGG CACGACTTGCGCACCCCGCTAAGCGCCATACTGCTGGGTGCCGACGTGTTGTTGCGCACCCATGATCTGGGCGCGCGGCC AACCAAGGTCGCATCGAGGATCTATTCCAGCGTTAAGCGGGCCAACCAGATCGTTGGCGACCTGCTCGACTTCACGCGCT CACAGATCGGTCCCGGCATCCCGCTGAAAAAGACCGAAGTAGACATGCAACCCATCTGCGCGCGGATTGTTGAAGAGTCG AGTACGGTCCACCCTGAGGCAGACATTCGTCTGACTTCAGATGAACCGGTCATTGGCCGCTTCGATGGCGATCGCCTGGA GCAGGTCTTTTCCAACCTCATCGGCAACGCTATACAGCACGGCAATAGCAGCGATCCCGTCGAAGTGACGCTGGCCGTCT CGGAGAGCGAGCTGCGTTTTACCGTCCACAACACCGGCAGCCCGATTCCCGAGGACGTGCTTCCGTTCATCTTCAACCCG ATGGACCGCTATTCACCCGAAAAGATGACCGACAACGGACCTTATTCAAGCCTGGGGCTGGGCCTGTTCATCGTCGACAG GATTGTCGATGCGCACGGCGGGCATATCGAGGTGACGTCGAAAGCGGATCTGGGGACTACGTTTGCGGTTGTTATCCCGT TGAGTGCGGGGTGA
Upstream 100 bases:
>100_bases GTGTGAACTTCACTCCATATTGTATCTGTCCGCCTGATCGGGACGGATACTTGGCTCACCCTACGAATCTGCAGTCTGCC GGGTTCATGTTCAGGTTTGA
Downstream 100 bases:
>100_bases GGTCGCGTAGCGGCGATAGAGTTGCGAGGCAACTGAAGAGCATTCGGATCAGAGCTGCCTGTCCCTGATAACGCGCCCGT CATGGCCTGAAAGTCAGCGC
Product: sensor histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 377; Mature: 376
Protein sequence:
>377_residues MAMRLSGFILDNIEPIVREWTDFARTLSALGEPLDTTELRDHAEQMLRAIAADLQTDQSLQQQVDKSQGHGVSNEQTAAK SHAITRLMSGFTIDQVVSEFRALRASVIKQWMSREALDTQQQIEDMIRFNEAIDQALAESISSYTSAIQASRNIFLGILG HDLRTPLSAILLGADVLLRTHDLGARPTKVASRIYSSVKRANQIVGDLLDFTRSQIGPGIPLKKTEVDMQPICARIVEES STVHPEADIRLTSDEPVIGRFDGDRLEQVFSNLIGNAIQHGNSSDPVEVTLAVSESELRFTVHNTGSPIPEDVLPFIFNP MDRYSPEKMTDNGPYSSLGLGLFIVDRIVDAHGGHIEVTSKADLGTTFAVVIPLSAG
Sequences:
>Translated_377_residues MAMRLSGFILDNIEPIVREWTDFARTLSALGEPLDTTELRDHAEQMLRAIAADLQTDQSLQQQVDKSQGHGVSNEQTAAK SHAITRLMSGFTIDQVVSEFRALRASVIKQWMSREALDTQQQIEDMIRFNEAIDQALAESISSYTSAIQASRNIFLGILG HDLRTPLSAILLGADVLLRTHDLGARPTKVASRIYSSVKRANQIVGDLLDFTRSQIGPGIPLKKTEVDMQPICARIVEES STVHPEADIRLTSDEPVIGRFDGDRLEQVFSNLIGNAIQHGNSSDPVEVTLAVSESELRFTVHNTGSPIPEDVLPFIFNP MDRYSPEKMTDNGPYSSLGLGLFIVDRIVDAHGGHIEVTSKADLGTTFAVVIPLSAG >Mature_376_residues AMRLSGFILDNIEPIVREWTDFARTLSALGEPLDTTELRDHAEQMLRAIAADLQTDQSLQQQVDKSQGHGVSNEQTAAKS HAITRLMSGFTIDQVVSEFRALRASVIKQWMSREALDTQQQIEDMIRFNEAIDQALAESISSYTSAIQASRNIFLGILGH DLRTPLSAILLGADVLLRTHDLGARPTKVASRIYSSVKRANQIVGDLLDFTRSQIGPGIPLKKTEVDMQPICARIVEESS TVHPEADIRLTSDEPVIGRFDGDRLEQVFSNLIGNAIQHGNSSDPVEVTLAVSESELRFTVHNTGSPIPEDVLPFIFNPM DRYSPEKMTDNGPYSSLGLGLFIVDRIVDAHGGHIEVTSKADLGTTFAVVIPLSAG
Specific function: Member of the two-component regulatory system resD/resE involved in the global regulation of aerobic and anaerobic respiration. Probably phosphorylates resD [H]
COG id: COG0642
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]
Homologues:
Organism=Escherichia coli, GI1786912, Length=228, Percent_Identity=31.140350877193, Blast_Score=88, Evalue=9e-19, Organism=Escherichia coli, GI87082128, Length=245, Percent_Identity=25.3061224489796, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI48994928, Length=246, Percent_Identity=30.4878048780488, Blast_Score=77, Evalue=3e-15, Organism=Escherichia coli, GI1790436, Length=278, Percent_Identity=26.978417266187, Blast_Score=76, Evalue=3e-15, Organism=Escherichia coli, GI145693157, Length=246, Percent_Identity=26.8292682926829, Blast_Score=72, Evalue=5e-14, Organism=Escherichia coli, GI1789149, Length=269, Percent_Identity=28.2527881040892, Blast_Score=69, Evalue=5e-13, Organism=Escherichia coli, GI87081816, Length=229, Percent_Identity=26.6375545851528, Blast_Score=66, Evalue=3e-12, Organism=Escherichia coli, GI1788393, Length=245, Percent_Identity=26.530612244898, Blast_Score=66, Evalue=4e-12, Organism=Escherichia coli, GI1786783, Length=232, Percent_Identity=26.7241379310345, Blast_Score=64, Evalue=2e-11, Organism=Escherichia coli, GI1789808, Length=223, Percent_Identity=22.8699551569507, Blast_Score=62, Evalue=7e-11, Organism=Escherichia coli, GI1786600, Length=229, Percent_Identity=25.764192139738, Blast_Score=62, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR000014 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 41342; Mature: 41211
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAMRLSGFILDNIEPIVREWTDFARTLSALGEPLDTTELRDHAEQMLRAIAADLQTDQSL CCEEECCHHHHCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCHHHH QQQVDKSQGHGVSNEQTAAKSHAITRLMSGFTIDQVVSEFRALRASVIKQWMSREALDTQ HHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHH QQIEDMIRFNEAIDQALAESISSYTSAIQASRNIFLGILGHDLRTPLSAILLGADVLLRT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHH HDLGARPTKVASRIYSSVKRANQIVGDLLDFTRSQIGPGIPLKKTEVDMQPICARIVEES CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCC STVHPEADIRLTSDEPVIGRFDGDRLEQVFSNLIGNAIQHGNSSDPVEVTLAVSESELRF CCCCCCCCEEECCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCEEE TVHNTGSPIPEDVLPFIFNPMDRYSPEKMTDNGPYSSLGLGLFIVDRIVDAHGGHIEVTS EECCCCCCCCHHHHHHHCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEC KADLGTTFAVVIPLSAG CCCCCCEEEEEEEECCC >Mature Secondary Structure AMRLSGFILDNIEPIVREWTDFARTLSALGEPLDTTELRDHAEQMLRAIAADLQTDQSL CEEECCHHHHCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCHHHH QQQVDKSQGHGVSNEQTAAKSHAITRLMSGFTIDQVVSEFRALRASVIKQWMSREALDTQ HHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHH QQIEDMIRFNEAIDQALAESISSYTSAIQASRNIFLGILGHDLRTPLSAILLGADVLLRT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHH HDLGARPTKVASRIYSSVKRANQIVGDLLDFTRSQIGPGIPLKKTEVDMQPICARIVEES CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCC STVHPEADIRLTSDEPVIGRFDGDRLEQVFSNLIGNAIQHGNSSDPVEVTLAVSESELRF CCCCCCCCEEECCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCEEE TVHNTGSPIPEDVLPFIFNPMDRYSPEKMTDNGPYSSLGLGLFIVDRIVDAHGGHIEVTS EECCCCCCCCHHHHHHHCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEC KADLGTTFAVVIPLSAG CCCCCCEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7934829; 9384377; 8631715 [H]