| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66045144
Identifier: 66045144
GI number: 66045144
Start: 2178618
End: 2179205
Strand: Reverse
Name: 66045144
Synonym: Psyr_1903
Alternate gene names: NA
Gene position: 2179205-2178618 (Counterclockwise)
Preceding gene: 66045149
Following gene: 66045143
Centisome position: 35.76
GC content: 60.37
Gene sequence:
>588_bases ATGTCGACATTAGATGAAGCAGGACGCCGCGAATACTACCGTATCGACGACAGCGTCGCACTGGAAATTAACCCCCTGTC TGCCGCCGACCAGGCAAGCCAGGATGCCATGCAGGACACCTCGACGCTGTTCGACCTGCTCAGCGAGCTGCATGTCAGCG AGTTCGAGTCGCAGCATCTGATGCGCCAGCTCGACGAGCGCGACCGGGTGCTGAACAGTTTTCTCAAGTCGCTGAGCAAG CGCATCGACCTGCTGGGCGAAGTGGTTGCCCACACCGCACTGGGCAAGCTGGGCGCGCCTCAGCCGGTCAAGCTGTCTGA AGGCGGGATTCAGTTCAATTCGCAACAGGCTTTTGCCGTCGGCGAACAACTGTCGATCAAGATGGTGCTCATGCCCCAGG CCGCGGGTCTGATGCTGCGCGCCAGGGTTTCGCAATGCGACACACTGGCCGACGGCAATTTCTATATCAGTACCGAGTTC GTCAATCTCCCGGATGCGCAGCGCCAGTTACTCGCCCGCCATGTGTTGCAGCGTCAGGCTCAGCAGCGGCGTCAGGCGCT GGAACAAGGCCAGCCCTCCGGAAATTGA
Upstream 100 bases:
>100_bases AGGAATTTGTTCGCAGGAATGAGGACGTCCGTGTGGCGGGCCTTGACGTGCAGCTTTACACTCGAAACTCTCTGACCACC GCCGCTAGCTTGGGTTCGCC
Downstream 100 bases:
>100_bases ACGCCCGGCCCCTTTATCACTATCAGTAGCCAGGAGTAAACGTGACCCTTATCTACGGCCACCGCGGCGCCAAGGGCGAA GCACCGGAAAATACCCTGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 195; Mature: 194
Protein sequence:
>195_residues MSTLDEAGRREYYRIDDSVALEINPLSAADQASQDAMQDTSTLFDLLSELHVSEFESQHLMRQLDERDRVLNSFLKSLSK RIDLLGEVVAHTALGKLGAPQPVKLSEGGIQFNSQQAFAVGEQLSIKMVLMPQAAGLMLRARVSQCDTLADGNFYISTEF VNLPDAQRQLLARHVLQRQAQQRRQALEQGQPSGN
Sequences:
>Translated_195_residues MSTLDEAGRREYYRIDDSVALEINPLSAADQASQDAMQDTSTLFDLLSELHVSEFESQHLMRQLDERDRVLNSFLKSLSK RIDLLGEVVAHTALGKLGAPQPVKLSEGGIQFNSQQAFAVGEQLSIKMVLMPQAAGLMLRARVSQCDTLADGNFYISTEF VNLPDAQRQLLARHVLQRQAQQRRQALEQGQPSGN >Mature_194_residues STLDEAGRREYYRIDDSVALEINPLSAADQASQDAMQDTSTLFDLLSELHVSEFESQHLMRQLDERDRVLNSFLKSLSKR IDLLGEVVAHTALGKLGAPQPVKLSEGGIQFNSQQAFAVGEQLSIKMVLMPQAAGLMLRARVSQCDTLADGNFYISTEFV NLPDAQRQLLARHVLQRQAQQRRQALEQGQPSGN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21698; Mature: 21567
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTLDEAGRREYYRIDDSVALEINPLSAADQASQDAMQDTSTLFDLLSELHVSEFESQHL CCCHHHHHCCCEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MRQLDERDRVLNSFLKSLSKRIDLLGEVVAHTALGKLGAPQPVKLSEGGIQFNSQQAFAV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCEECCCHHHHH GEQLSIKMVLMPQAAGLMLRARVSQCDTLADGNFYISTEFVNLPDAQRQLLARHVLQRQA CCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHH QQRRQALEQGQPSGN HHHHHHHHCCCCCCC >Mature Secondary Structure STLDEAGRREYYRIDDSVALEINPLSAADQASQDAMQDTSTLFDLLSELHVSEFESQHL CCHHHHHCCCEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MRQLDERDRVLNSFLKSLSKRIDLLGEVVAHTALGKLGAPQPVKLSEGGIQFNSQQAFAV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCEECCCHHHHH GEQLSIKMVLMPQAAGLMLRARVSQCDTLADGNFYISTEFVNLPDAQRQLLARHVLQRQA CCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHH QQRRQALEQGQPSGN HHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA