| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is fabG [H]
Identifier: 66045133
GI number: 66045133
Start: 2162175
End: 2162924
Strand: Reverse
Name: fabG [H]
Synonym: Psyr_1892
Alternate gene names: 66045133
Gene position: 2162924-2162175 (Counterclockwise)
Preceding gene: 66045135
Following gene: 66045132
Centisome position: 35.49
GC content: 63.33
Gene sequence:
>750_bases ATGATCGAACACCTTAAACTCGCCGGCAAAGTAGCGCTCGTGCAGGGCGGCTCACGTGGCATCGGCGCAGCCATCGTCCA GCGCCTGGCCAAAGAAGGCGCTGCCGTGGCGTTTACCTACGTCAGCTCCGAGGTCAGCGCTCTGGAGATTCAGGACAGCA TCGTCGCCAATGGCGGCCGCGCACTGGCCATTCGCGCAGACAGCGCCGACGAAAAAGCCATCCGCCAGGCCGTGCAGACC ACTGCCGAGACCCTTGGCAGGCTGGATATCCTGGTCAATAACGCCGGCATTCTGGCCATCGCGCCGCTCAATGAATTCAG CATGCAGGACTTCGACAAGACCCTGGCCATCAACGTGCGCAGCGTATTCATCGCCAGCCAGGAAGCCGCGCGACATATGG AAGAAGGCGGCCGCATCATCAACATTGGCAGCACCAACGCTGACCGCATGCCCTTTGCGGGCGGCGCCACGTACGCCATG AGCAAATCAGCGCTGATCGGCCTGACCAAAGGCATGGCCCGCGACCTCGGTCCGCAAGGCATCACCGTCAACAACGTTCA GCCCGGCCCGGTGGACACCGACATGAACCCGGCGCAGGGCGAATTCGCCGAAACCCTGAAAGCGCTGATGGCCCTGCCCC GCTACGGCACCAGCGAAGAAATCGCCAGCTTCGTCGCCTACCTCGCAGGCCCTGAAGCGGGCTACATCACCGGTGCCAGC CTGACCATCGACGGCGGCTTCAGCGCCTGA
Upstream 100 bases:
>100_bases GAACTTTTGGTTCAGCAAGACTATCGCAATCAAGGTCTATTCTGGTCGCAATCGTCGACAGCCTCAGGCTTGTCCGAGAC CTGCCCCCAAGGAGAACATC
Downstream 100 bases:
>100_bases CGCCACCACCACAAGCGGCCCTTGGCCCAAGGGCCGCATCCCGTGCCAGGGCCTTTTACTGGCGAATCAGCGTTTATTTG CTTAAGCGCATGAAAAATCT
Product: 3-ketoacyl-(acyl-carrier-protein) reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 249; Mature: 249
Protein sequence:
>249_residues MIEHLKLAGKVALVQGGSRGIGAAIVQRLAKEGAAVAFTYVSSEVSALEIQDSIVANGGRALAIRADSADEKAIRQAVQT TAETLGRLDILVNNAGILAIAPLNEFSMQDFDKTLAINVRSVFIASQEAARHMEEGGRIINIGSTNADRMPFAGGATYAM SKSALIGLTKGMARDLGPQGITVNNVQPGPVDTDMNPAQGEFAETLKALMALPRYGTSEEIASFVAYLAGPEAGYITGAS LTIDGGFSA
Sequences:
>Translated_249_residues MIEHLKLAGKVALVQGGSRGIGAAIVQRLAKEGAAVAFTYVSSEVSALEIQDSIVANGGRALAIRADSADEKAIRQAVQT TAETLGRLDILVNNAGILAIAPLNEFSMQDFDKTLAINVRSVFIASQEAARHMEEGGRIINIGSTNADRMPFAGGATYAM SKSALIGLTKGMARDLGPQGITVNNVQPGPVDTDMNPAQGEFAETLKALMALPRYGTSEEIASFVAYLAGPEAGYITGAS LTIDGGFSA >Mature_249_residues MIEHLKLAGKVALVQGGSRGIGAAIVQRLAKEGAAVAFTYVSSEVSALEIQDSIVANGGRALAIRADSADEKAIRQAVQT TAETLGRLDILVNNAGILAIAPLNEFSMQDFDKTLAINVRSVFIASQEAARHMEEGGRIINIGSTNADRMPFAGGATYAM SKSALIGLTKGMARDLGPQGITVNNVQPGPVDTDMNPAQGEFAETLKALMALPRYGTSEEIASFVAYLAGPEAGYITGAS LTIDGGFSA
Specific function: Unknown
COG id: COG1028
COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI40254992, Length=240, Percent_Identity=34.5833333333333, Blast_Score=112, Evalue=2e-25, Organism=Homo sapiens, GI15277342, Length=257, Percent_Identity=32.295719844358, Blast_Score=110, Evalue=1e-24, Organism=Homo sapiens, GI32483357, Length=259, Percent_Identity=33.2046332046332, Blast_Score=109, Evalue=2e-24, Organism=Homo sapiens, GI7705925, Length=252, Percent_Identity=32.5396825396825, Blast_Score=105, Evalue=4e-23, Organism=Homo sapiens, GI5031737, Length=249, Percent_Identity=30.9236947791165, Blast_Score=102, Evalue=3e-22, Organism=Homo sapiens, GI19923817, Length=254, Percent_Identity=29.9212598425197, Blast_Score=102, Evalue=4e-22, Organism=Homo sapiens, GI66933014, Length=257, Percent_Identity=33.852140077821, Blast_Score=102, Evalue=4e-22, Organism=Homo sapiens, GI10190704, Length=251, Percent_Identity=31.0756972111554, Blast_Score=94, Evalue=8e-20, Organism=Homo sapiens, GI31542939, Length=201, Percent_Identity=35.3233830845771, Blast_Score=91, Evalue=7e-19, Organism=Homo sapiens, GI126723750, Length=252, Percent_Identity=29.7619047619048, Blast_Score=89, Evalue=4e-18, Organism=Homo sapiens, GI224922801, Length=187, Percent_Identity=35.2941176470588, Blast_Score=84, Evalue=1e-16, Organism=Homo sapiens, GI33667109, Length=199, Percent_Identity=32.1608040201005, Blast_Score=79, Evalue=4e-15, Organism=Homo sapiens, GI40254986, Length=192, Percent_Identity=28.125, Blast_Score=75, Evalue=8e-14, Organism=Homo sapiens, GI4758504, Length=253, Percent_Identity=28.4584980237154, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI4504505, Length=194, Percent_Identity=30.4123711340206, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI7706318, Length=213, Percent_Identity=28.169014084507, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI209862901, Length=200, Percent_Identity=28.5, Blast_Score=68, Evalue=6e-12, Organism=Homo sapiens, GI19923983, Length=200, Percent_Identity=28.5, Blast_Score=68, Evalue=6e-12, Organism=Homo sapiens, GI166795268, Length=205, Percent_Identity=27.3170731707317, Blast_Score=68, Evalue=8e-12, Organism=Homo sapiens, GI4503817, Length=197, Percent_Identity=27.9187817258883, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI126723191, Length=199, Percent_Identity=31.6582914572864, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI4503301, Length=257, Percent_Identity=25.2918287937743, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI109715829, Length=240, Percent_Identity=27.9166666666667, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI83715985, Length=252, Percent_Identity=28.1746031746032, Blast_Score=65, Evalue=6e-11, Organism=Homo sapiens, GI59889578, Length=250, Percent_Identity=27.6, Blast_Score=65, Evalue=7e-11, Organism=Escherichia coli, GI2367365, Length=243, Percent_Identity=51.8518518518518, Blast_Score=229, Evalue=1e-61, Organism=Escherichia coli, GI1788459, Length=242, Percent_Identity=35.9504132231405, Blast_Score=139, Evalue=1e-34, Organism=Escherichia coli, GI1787335, Length=249, Percent_Identity=40.1606425702811, Blast_Score=137, Evalue=7e-34, Organism=Escherichia coli, GI87082100, Length=253, Percent_Identity=33.9920948616601, Blast_Score=132, Evalue=3e-32, Organism=Escherichia coli, GI2367175, Length=245, Percent_Identity=34.6938775510204, Blast_Score=124, Evalue=8e-30, Organism=Escherichia coli, GI1790717, Length=254, Percent_Identity=32.2834645669291, Blast_Score=119, Evalue=2e-28, Organism=Escherichia coli, GI87082160, Length=255, Percent_Identity=32.5490196078431, Blast_Score=117, Evalue=6e-28, Organism=Escherichia coli, GI1789208, Length=259, Percent_Identity=31.6602316602317, Blast_Score=117, Evalue=9e-28, Organism=Escherichia coli, GI1789378, Length=246, Percent_Identity=33.3333333333333, Blast_Score=116, Evalue=2e-27, Organism=Escherichia coli, GI1787905, Length=251, Percent_Identity=33.8645418326693, Blast_Score=106, Evalue=1e-24, Organism=Escherichia coli, GI1789057, Length=255, Percent_Identity=29.4117647058824, Blast_Score=98, Evalue=5e-22, Organism=Escherichia coli, GI1786812, Length=256, Percent_Identity=29.6875, Blast_Score=90, Evalue=1e-19, Organism=Escherichia coli, GI1787820, Length=184, Percent_Identity=28.804347826087, Blast_Score=71, Evalue=8e-14, Organism=Escherichia coli, GI1787545, Length=256, Percent_Identity=25.390625, Blast_Score=64, Evalue=7e-12, Organism=Caenorhabditis elegans, GI17562906, Length=264, Percent_Identity=36.3636363636364, Blast_Score=122, Evalue=1e-28, Organism=Caenorhabditis elegans, GI71994600, Length=248, Percent_Identity=33.0645161290323, Blast_Score=122, Evalue=2e-28, Organism=Caenorhabditis elegans, GI71994604, Length=248, Percent_Identity=33.4677419354839, Blast_Score=118, Evalue=2e-27, Organism=Caenorhabditis elegans, GI17531453, Length=263, Percent_Identity=35.361216730038, Blast_Score=117, Evalue=5e-27, Organism=Caenorhabditis elegans, GI17562908, Length=264, Percent_Identity=36.3636363636364, Blast_Score=116, Evalue=1e-26, Organism=Caenorhabditis elegans, GI193204405, Length=262, Percent_Identity=35.8778625954198, Blast_Score=114, Evalue=4e-26, Organism=Caenorhabditis elegans, GI25147288, Length=249, Percent_Identity=34.5381526104418, Blast_Score=113, Evalue=1e-25, Organism=Caenorhabditis elegans, GI17562910, Length=260, Percent_Identity=32.6923076923077, Blast_Score=112, Evalue=2e-25, Organism=Caenorhabditis elegans, GI17561402, Length=255, Percent_Identity=34.9019607843137, Blast_Score=108, Evalue=2e-24, Organism=Caenorhabditis elegans, GI115534694, Length=255, Percent_Identity=32.5490196078431, Blast_Score=108, Evalue=3e-24, Organism=Caenorhabditis elegans, GI17560676, Length=257, Percent_Identity=33.0739299610895, Blast_Score=106, Evalue=1e-23, Organism=Caenorhabditis elegans, GI17560332, Length=266, Percent_Identity=33.8345864661654, Blast_Score=105, Evalue=2e-23, Organism=Caenorhabditis elegans, GI17555706, Length=246, Percent_Identity=32.1138211382114, Blast_Score=103, Evalue=1e-22, Organism=Caenorhabditis elegans, GI17559104, Length=264, Percent_Identity=33.3333333333333, Blast_Score=100, Evalue=1e-21, Organism=Caenorhabditis elegans, GI17560220, Length=262, Percent_Identity=33.969465648855, Blast_Score=96, Evalue=1e-20, Organism=Caenorhabditis elegans, GI17560150, Length=258, Percent_Identity=31.7829457364341, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI72000259, Length=261, Percent_Identity=31.4176245210728, Blast_Score=94, Evalue=8e-20, Organism=Caenorhabditis elegans, GI17562990, Length=258, Percent_Identity=30.2325581395349, Blast_Score=91, Evalue=5e-19, Organism=Caenorhabditis elegans, GI17538480, Length=263, Percent_Identity=31.1787072243346, Blast_Score=91, Evalue=5e-19, Organism=Caenorhabditis elegans, GI17562904, Length=265, Percent_Identity=30.5660377358491, Blast_Score=91, Evalue=6e-19, Organism=Caenorhabditis elegans, GI17544670, Length=266, Percent_Identity=27.8195488721804, Blast_Score=91, Evalue=6e-19, Organism=Caenorhabditis elegans, GI17565030, Length=266, Percent_Identity=30.8270676691729, Blast_Score=87, Evalue=6e-18, Organism=Caenorhabditis elegans, GI17563726, Length=261, Percent_Identity=29.8850574712644, Blast_Score=87, Evalue=1e-17, Organism=Caenorhabditis elegans, GI71982365, Length=192, Percent_Identity=27.6041666666667, Blast_Score=84, Evalue=6e-17, Organism=Caenorhabditis elegans, GI17508651, Length=256, Percent_Identity=30.859375, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17551412, Length=265, Percent_Identity=29.811320754717, Blast_Score=82, Evalue=4e-16, Organism=Caenorhabditis elegans, GI17536025, Length=251, Percent_Identity=28.6852589641434, Blast_Score=81, Evalue=6e-16, Organism=Caenorhabditis elegans, GI17568967, Length=196, Percent_Identity=31.6326530612245, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17564282, Length=192, Percent_Identity=30.2083333333333, Blast_Score=77, Evalue=6e-15, Organism=Caenorhabditis elegans, GI17538182, Length=257, Percent_Identity=31.1284046692607, Blast_Score=77, Evalue=9e-15, Organism=Caenorhabditis elegans, GI17538486, Length=266, Percent_Identity=30.0751879699248, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17536651, Length=251, Percent_Identity=27.8884462151394, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI17555612, Length=210, Percent_Identity=30.952380952381, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI71997099, Length=208, Percent_Identity=31.7307692307692, Blast_Score=75, Evalue=4e-14, Organism=Caenorhabditis elegans, GI17558628, Length=195, Percent_Identity=27.6923076923077, Blast_Score=74, Evalue=8e-14, Organism=Caenorhabditis elegans, GI17508895, Length=199, Percent_Identity=28.1407035175879, Blast_Score=71, Evalue=4e-13, Organism=Caenorhabditis elegans, GI17558006, Length=263, Percent_Identity=30.0380228136882, Blast_Score=70, Evalue=7e-13, Organism=Caenorhabditis elegans, GI193203117, Length=239, Percent_Identity=26.3598326359833, Blast_Score=66, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17561272, Length=259, Percent_Identity=28.5714285714286, Blast_Score=65, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6324126, Length=248, Percent_Identity=26.2096774193548, Blast_Score=73, Evalue=5e-14, Organism=Saccharomyces cerevisiae, GI6322861, Length=257, Percent_Identity=25.6809338521401, Blast_Score=67, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6322226, Length=189, Percent_Identity=29.1005291005291, Blast_Score=64, Evalue=2e-11, Organism=Drosophila melanogaster, GI23397609, Length=251, Percent_Identity=38.2470119521912, Blast_Score=137, Evalue=7e-33, Organism=Drosophila melanogaster, GI28571526, Length=249, Percent_Identity=36.9477911646586, Blast_Score=132, Evalue=1e-31, Organism=Drosophila melanogaster, GI21357041, Length=250, Percent_Identity=37.2, Blast_Score=131, Evalue=4e-31, Organism=Drosophila melanogaster, GI24644339, Length=254, Percent_Identity=33.8582677165354, Blast_Score=125, Evalue=2e-29, Organism=Drosophila melanogaster, GI24643142, Length=245, Percent_Identity=32.6530612244898, Blast_Score=124, Evalue=5e-29, Organism=Drosophila melanogaster, GI21355319, Length=256, Percent_Identity=35.546875, Blast_Score=119, Evalue=2e-27, Organism=Drosophila melanogaster, GI24639444, Length=251, Percent_Identity=32.2709163346614, Blast_Score=109, Evalue=2e-24, Organism=Drosophila melanogaster, GI24644337, Length=251, Percent_Identity=33.8645418326693, Blast_Score=106, Evalue=1e-23, Organism=Drosophila melanogaster, GI17737361, Length=253, Percent_Identity=31.2252964426877, Blast_Score=89, Evalue=3e-18, Organism=Drosophila melanogaster, GI21357673, Length=197, Percent_Identity=27.9187817258883, Blast_Score=83, Evalue=2e-16, Organism=Drosophila melanogaster, GI24641232, Length=235, Percent_Identity=29.3617021276596, Blast_Score=71, Evalue=6e-13, Organism=Drosophila melanogaster, GI24656154, Length=213, Percent_Identity=27.6995305164319, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI19922628, Length=213, Percent_Identity=27.6995305164319, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI161076371, Length=231, Percent_Identity=27.7056277056277, Blast_Score=66, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 25843; Mature: 25843
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEHLKLAGKVALVQGGSRGIGAAIVQRLAKEGAAVAFTYVSSEVSALEIQDSIVANGGR CCCCHHHCCEEEEEECCCCCHHHHHHHHHHHCCCEEEEEEECCCCCEEEEHHHHHCCCCE ALAIRADSADEKAIRQAVQTTAETLGRLDILVNNAGILAIAPLNEFSMQDFDKTLAINVR EEEEECCCCHHHHHHHHHHHHHHHHHHEEEEEECCCEEEEECCCHHHHHHCCCEEEEEEH SVFIASQEAARHMEEGGRIINIGSTNADRMPFAGGATYAMSKSALIGLTKGMARDLGPQG HEEEECHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHCCCCC ITVNNVQPGPVDTDMNPAQGEFAETLKALMALPRYGTSEEIASFVAYLAGPEAGYITGAS EEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCEEECCE LTIDGGFSA EEECCCCCC >Mature Secondary Structure MIEHLKLAGKVALVQGGSRGIGAAIVQRLAKEGAAVAFTYVSSEVSALEIQDSIVANGGR CCCCHHHCCEEEEEECCCCCHHHHHHHHHHHCCCEEEEEEECCCCCEEEEHHHHHCCCCE ALAIRADSADEKAIRQAVQTTAETLGRLDILVNNAGILAIAPLNEFSMQDFDKTLAINVR EEEEECCCCHHHHHHHHHHHHHHHHHHEEEEEECCCEEEEECCCHHHHHHCCCEEEEEEH SVFIASQEAARHMEEGGRIINIGSTNADRMPFAGGATYAMSKSALIGLTKGMARDLGPQG HEEEECHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHCCCCC ITVNNVQPGPVDTDMNPAQGEFAETLKALMALPRYGTSEEIASFVAYLAGPEAGYITGAS EEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCEEECCE LTIDGGFSA EEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503 [H]