| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66045096
Identifier: 66045096
GI number: 66045096
Start: 2129806
End: 2130837
Strand: Reverse
Name: 66045096
Synonym: Psyr_1852
Alternate gene names: NA
Gene position: 2130837-2129806 (Counterclockwise)
Preceding gene: 66045103
Following gene: 66045095
Centisome position: 34.97
GC content: 64.44
Gene sequence:
>1032_bases ATGTTATCCGGTATTTCCCTGCTTCGAGTTCCCAACGCGCTGCGTCTGCTGGCCCTGCCGATAACCCTGATCCTGAGCCT GGCCGCCGCAACCGCCAGCGCTGCGGCGCCCGGTACGGTGCAGCGGCCGATAAGCGTGGATACCGAGAACGGCAAGCTGT ACGGCACGCTGCTCATGCCGCGTTCCGACAAACCGGTGCCGGTGGTGCTGATCGTCGCCGGTTCCGGCCCCACCGACCGC GACGGCAACAACCCGGAGGGTGGACGCAACGACAGCATGAAACGCCTGGCGGTGATCCTGGCCAGCAACAATATCGCCAG CGTGCGCTACGACAAACGCGGCGTCGCGGCCAGCAAGGCGGTCACGCCGGATGAACGCAACCTGAGCGTCGAGCGCTATG TGGCCGATGTGCAGCTCTGGGCCAGAGCGCTGAAAGCCAACCCGCGCCTGGGCCAGTTGATTCTGTTGGGCCACAGCGAA GGCGCGCTGGTGGCGACGCTGGCGGCTGAAAAAGTAGGAGCAGCGGCGCTGATTTCCGTGGCCGGCACCGGGCGACCGGT GGATCAGGTGCTGCGCGAACAGTTTCAGGAGCGCCTGCCACCGGACCTGCTGCAGCGCAGCGATCAGTTGCTCGACGAAC TCAAGGCCGGCAAGACCGATGACAACGTGCCCGCCGAGCTGGAAGTGGTGTTCCGCCCCAGTGTCCAGCCGTACCTGATC TCGCTGTTCCGCCAGGACCCGGCGGCGGCTTTCGGTGCCTTGCACATTCCGGCGCTGATCGTTCAGGGTCGCAACGACAT TCAGGTCGGTGTGGGTGATGCGCTGCTGTTGCAGAAGGCCAAGCCGGATGCACAGCTGGCCCTGATCGACGGCATGAATC ATGTGCTGCGCATCGTCCCGGACGATTTGCAGCAACAACTGCTCTCCTACCGCAATCCGACCCAGCCGCTGGCCAGTGAA GTGACCGAGCGGATCCTGAGCTTCATCAAGGCGCTGCCTCACCCGGATGCCACACCCGGGAAAAAGATCTGA
Upstream 100 bases:
>100_bases ACCAAGCGCGCCAGTATACGCAGGCTCGCGGTTCAGTTCATCCTCGAACCTTCTGTCACCGCGTGCGTCCAAGCGTGACT CCCCCAATGATGGCCTTGCG
Downstream 100 bases:
>100_bases CGCGCGTTAGTCAAAAGCCCTTCAGTCCTGGCGAATCTGGCCGATAGCGATTTGCTGGCCCTGTGTTCCGGCACCTTAGT GTTTCGGCACCTTTATGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: Alpha/Beta Fold Family Hydrolase; Alpha/Beta Hydrolase Fold; Lipoprotein; Alpha/Beta Hydrolase; Hydrolase; Protein Containing Alpha/Beta Hydrolase Fold; PGAP1 Family Protein; Signal Peptide; Hydrolase Alpha/Beta Fold Family; Lysophospholipase-Like Protein; Peptidase S; Secreted Protein
Number of amino acids: Translated: 343; Mature: 343
Protein sequence:
>343_residues MLSGISLLRVPNALRLLALPITLILSLAAATASAAAPGTVQRPISVDTENGKLYGTLLMPRSDKPVPVVLIVAGSGPTDR DGNNPEGGRNDSMKRLAVILASNNIASVRYDKRGVAASKAVTPDERNLSVERYVADVQLWARALKANPRLGQLILLGHSE GALVATLAAEKVGAAALISVAGTGRPVDQVLREQFQERLPPDLLQRSDQLLDELKAGKTDDNVPAELEVVFRPSVQPYLI SLFRQDPAAAFGALHIPALIVQGRNDIQVGVGDALLLQKAKPDAQLALIDGMNHVLRIVPDDLQQQLLSYRNPTQPLASE VTERILSFIKALPHPDATPGKKI
Sequences:
>Translated_343_residues MLSGISLLRVPNALRLLALPITLILSLAAATASAAAPGTVQRPISVDTENGKLYGTLLMPRSDKPVPVVLIVAGSGPTDR DGNNPEGGRNDSMKRLAVILASNNIASVRYDKRGVAASKAVTPDERNLSVERYVADVQLWARALKANPRLGQLILLGHSE GALVATLAAEKVGAAALISVAGTGRPVDQVLREQFQERLPPDLLQRSDQLLDELKAGKTDDNVPAELEVVFRPSVQPYLI SLFRQDPAAAFGALHIPALIVQGRNDIQVGVGDALLLQKAKPDAQLALIDGMNHVLRIVPDDLQQQLLSYRNPTQPLASE VTERILSFIKALPHPDATPGKKI >Mature_343_residues MLSGISLLRVPNALRLLALPITLILSLAAATASAAAPGTVQRPISVDTENGKLYGTLLMPRSDKPVPVVLIVAGSGPTDR DGNNPEGGRNDSMKRLAVILASNNIASVRYDKRGVAASKAVTPDERNLSVERYVADVQLWARALKANPRLGQLILLGHSE GALVATLAAEKVGAAALISVAGTGRPVDQVLREQFQERLPPDLLQRSDQLLDELKAGKTDDNVPAELEVVFRPSVQPYLI SLFRQDPAAAFGALHIPALIVQGRNDIQVGVGDALLLQKAKPDAQLALIDGMNHVLRIVPDDLQQQLLSYRNPTQPLASE VTERILSFIKALPHPDATPGKKI
Specific function: Unknown
COG id: COG1073
COG function: function code R; Hydrolases of the alpha/beta superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36665; Mature: 36665
Theoretical pI: Translated: 9.32; Mature: 9.32
Prosite motif: PS00120 LIPASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSGISLLRVPNALRLLALPITLILSLAAATASAAAPGTVQRPISVDTENGKLYGTLLMP CCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCEEEEEEEEC RSDKPVPVVLIVAGSGPTDRDGNNPEGGRNDSMKRLAVILASNNIASVRYDKRGVAASKA CCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHEEEEEECCCEEEEEECCCCCCCCCC VTPDERNLSVERYVADVQLWARALKANPRLGQLILLGHSEGALVATLAAEKVGAAALISV CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEHHHHHHCCEEEEEE AGTGRPVDQVLREQFQERLPPDLLQRSDQLLDELKAGKTDDNVPAELEVVFRPSVQPYLI CCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHH SLFRQDPAAAFGALHIPALIVQGRNDIQVGVGDALLLQKAKPDAQLALIDGMNHVLRIVP HHHHCCHHHHHHHHHHCEEEEECCCCEEEECCHHEEHCCCCCCCEEEEECCCCHHHEECC DDLQQQLLSYRNPTQPLASEVTERILSFIKALPHPDATPGKKI HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MLSGISLLRVPNALRLLALPITLILSLAAATASAAAPGTVQRPISVDTENGKLYGTLLMP CCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCEEEEEEEEC RSDKPVPVVLIVAGSGPTDRDGNNPEGGRNDSMKRLAVILASNNIASVRYDKRGVAASKA CCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHEEEEEECCCEEEEEECCCCCCCCCC VTPDERNLSVERYVADVQLWARALKANPRLGQLILLGHSEGALVATLAAEKVGAAALISV CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEHHHHHHCCEEEEEE AGTGRPVDQVLREQFQERLPPDLLQRSDQLLDELKAGKTDDNVPAELEVVFRPSVQPYLI CCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHH SLFRQDPAAAFGALHIPALIVQGRNDIQVGVGDALLLQKAKPDAQLALIDGMNHVLRIVP HHHHCCHHHHHHHHHHCEEEEECCCCEEEECCHHEEHCCCCCCCEEEEECCCCHHHEECC DDLQQQLLSYRNPTQPLASEVTERILSFIKALPHPDATPGKKI HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA