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The map label for this gene is petP [H]

Identifier: 66045084

GI number: 66045084

Start: 2120725

End: 2121195

Strand: Reverse

Name: petP [H]

Synonym: Psyr_1840

Alternate gene names: 66045084

Gene position: 2121195-2120725 (Counterclockwise)

Preceding gene: 66045088

Following gene: 66045083

Centisome position: 34.81

GC content: 59.87

Gene sequence:

>471_bases
ATGCTTGACCTTAAAAAACCTGCCAATCAACAAATGGCCATGGAAGCCTTCTTCTTCGGCTATCAGGCATTCACTGCCAA
GGCTGATGAAATGCTGGCTAGACGCGGCTTCAGTCGCGTACACCAGCGCATCGTATTTTTCATCGCCCGTTACCCCGGCC
TGAGCGTCAAGGAGCTGCTCACCGTATTGGGCGTGAGCAAACAGGCCCTCAATGCTCCGCTGCGCCAGCTGATCGCCATG
AACCTGGTGCACAGCGCGGCCCCCGAAAATGACAAGCGCAAACGACTGCTGGGCCTTACCGATGAAGGCGCCCTTTTTGA
ACAGGGCTTGCGTCGCGAACAGGTCAAACTGCTGCAGCGGGTGTTCGCCGAAGCGGGTCAGGATGCCGTGGACGGCTGGC
TGATGGTCAATCGGGCGCTGGGGCAGACCCTGCAGTCCGGCGCTTGCCCGGCCGGGGCTGACGCCGAGTAA

Upstream 100 bases:

>100_bases
GCGTTCGGAGAAAGCCATGGCAGTTACCTGTAGCCGAGACAATTGGAAATACGTCAAACTGATTGACTCAAATTACGACG
ATCAACCCGGATACGTCAAC

Downstream 100 bases:

>100_bases
ACGCCACGGCTGCAACTGTGCTGGCGTTTACTCGTGTCGCTGTATTGCAAGGCCGGGCAGCCATGCGTTTAGGCTTGGCG
CCCTTTGCTACCTGCCCGCT

Product: regulatory protein, MarR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MLDLKKPANQQMAMEAFFFGYQAFTAKADEMLARRGFSRVHQRIVFFIARYPGLSVKELLTVLGVSKQALNAPLRQLIAM
NLVHSAAPENDKRKRLLGLTDEGALFEQGLRREQVKLLQRVFAEAGQDAVDGWLMVNRALGQTLQSGACPAGADAE

Sequences:

>Translated_156_residues
MLDLKKPANQQMAMEAFFFGYQAFTAKADEMLARRGFSRVHQRIVFFIARYPGLSVKELLTVLGVSKQALNAPLRQLIAM
NLVHSAAPENDKRKRLLGLTDEGALFEQGLRREQVKLLQRVFAEAGQDAVDGWLMVNRALGQTLQSGACPAGADAE
>Mature_156_residues
MLDLKKPANQQMAMEAFFFGYQAFTAKADEMLARRGFSRVHQRIVFFIARYPGLSVKELLTVLGVSKQALNAPLRQLIAM
NLVHSAAPENDKRKRLLGLTDEGALFEQGLRREQVKLLQRVFAEAGQDAVDGWLMVNRALGQTLQSGACPAGADAE

Specific function: Necessary for photosynthetic and respiratory growth [H]

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR023187
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 17276; Mature: 17276

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDLKKPANQQMAMEAFFFGYQAFTAKADEMLARRGFSRVHQRIVFFIARYPGLSVKELL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
TVLGVSKQALNAPLRQLIAMNLVHSAAPENDKRKRLLGLTDEGALFEQGLRREQVKLLQR
HHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
VFAEAGQDAVDGWLMVNRALGQTLQSGACPAGADAE
HHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MLDLKKPANQQMAMEAFFFGYQAFTAKADEMLARRGFSRVHQRIVFFIARYPGLSVKELL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
TVLGVSKQALNAPLRQLIAMNLVHSAAPENDKRKRLLGLTDEGALFEQGLRREQVKLLQR
HHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
VFAEAGQDAVDGWLMVNRALGQTLQSGACPAGADAE
HHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1323023 [H]