| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is cbg-1 [H]
Identifier: 66045026
GI number: 66045026
Start: 2029582
End: 2032302
Strand: Reverse
Name: cbg-1 [H]
Synonym: Psyr_1781
Alternate gene names: 66045026
Gene position: 2032302-2029582 (Counterclockwise)
Preceding gene: 66045027
Following gene: 66045023
Centisome position: 33.35
GC content: 58.32
Gene sequence:
>2721_bases ATGAATGACGTAAGGAATAACTCCGTGTCCATGATCAAACAAGGCCTGGGCCTGAGCCTGTTGGCGCTCGGTATCGCCCA GGCAGGCAGCGTATTCGCTGTCACGCCGATGACCGGCAATGAAGTGGAAGCGCGCGTAGGCGCGATGCTGGACAACATGA CGCAATCGGAAAAAATCAATTTTTCGCGCGTTGACGACGGCCGCATGATTCCCAAGCTGGACAAGTTCAACCTGCAGGGT ACGGTCGCCTATGACTCGGCGATGGGCGTACTGGTCGGCGGCAAGACGTTCGGTGCGCAGTACCCTTCCCCGTCAGCACT CGCGGCCACCTGGAGCATTAACCGGGCCAAGGAATTCGGTCTGGCCATTGGCTACGAAACCCGCATCGCAGGCGGTCAGC AGATGCTGTCGCCAGCCATCAACCTGTACCGCACGCCTTTCAACGGTCGGGCGGCTGAGTACATGAGCGGCGAAGATCCG TTTCTCGGCGCAGTACTGGCACCAGCCGTCACCAACGGTATCCAGGTTCAAGGCGTCCAGGCGGCCGCCAAGCATTACCT GATGAACGAGCAGGAAGCGAACCGTCATTATCTGGATGTGAAGATAGACGAACGAGCGATGCAGGAGCTGTACCTGCCGG GCTTCGAATCGCTGGTCAAGAACTCGAATATCGCCTCGATCATGTGCGGCTACAACAAGATCAACGGCGAATACGCGTGT GAAAACCATCACCTCATCACCGATATCCTCAAAGGCCAATGGGGCTTTCAGGGTAACGTCATGAGCGATTTCAACTCGGT TCAGGACGCCTTCAAGGGCGCCTGGGCCGGCACCGATATCGACATGCCCAGCGGCCTTCAGTTTACCGAAGCCAAACTGC TGCCTTATGTCTGGAACGGTCAGTTGCACCAGAACGTGATAGACGACAAGGTGCGCAGGAACCTGAGAGCGCTGGTCAGC TACGGCTTTGACAAGGGGATCAACAAGGCGCAGCCACTGGAGCATCGTGAATACGGTCAGCTGGCGGCCTTGAACGTGGC CCGAGAATCGATCGTCCTGTTGCGCAACGAGCCAGTGGACGGACAGAAGCCTGTACTGCCCCTGTCCAGAAACGCAAGGA TCGCCGTCATTGGCGACATGGCCATGCAGCCGCCGACCGCGCCGTTCGGTACCGCCTATTCGGCGCCGGCCAGCTATGTC ACCGAAGTGAGCGGACTCAAGCAACTGGCGTCTGACCCGTCCAACGTGGACTACCTGCCACAGATGAGCCTCAACCCTAA ATCGTCGGTCTGGTATCAGCCAGGCAGTGACCAGCAGGCGATCAGCAATACCGGCGTAAAAGCCGAGTACTACGCTAACA CCTCGCTGTCCGGCGACCCGGTGGCAACTCGCGTCGAGCCGGGCGTCAACCTGGACTGGATTACCAACACCAACGTCACT GATTACGGCAGCAGCGCGGTCAACGGCTACAGCCCTTCAGCCGGTTCGTTCTCGGCCCGTTTCACTGGCAAGATCAAACC GACGATCACCGGGCCGCAGGTGTTCAAGGTCCGTGCGGACGGTGCCTATAAACTCTGGATCAACGATGAGCTGGTGCTTG AAGATGAAGGCGCGCAAGTCTCGTTCGACCTGATCCCAGTCGTGCCGCGCACCGTCAAGACACCGAATCTCAAGGCTGGC AGCGAATACAACGTGCGCCTCGAATACCGCCGGCTCAAGGGCAACTTCACTCCGGTACTGGGCGGCATGAACGGCGTACA GATGAGCTGGGCAGCGTTGCGACCACCGAAGAATCTGGGGGATTACGACGCTGTCGTGGTAGCCGCCGGCAATAACTTCG AATACGAGGGTGAGTCGCTCGATCGTCCGTTCGAACTGCCGCAATTCCAGTCCGAGCTGATCGGTTTTATCCAAAAAGCC AACCCGAAAACCATCGTGGTACTGCACGGTGGCGGTGGCATGGACATGCAGCCGTGGGCTGACAAGGTAGCCGCGTCTCT GCACGCCTGGTATCCAGGGCAACAGGGCGGTCAGGCACTGGCTGAAATACTGTTCGGCAAGGTCAATCCATCGGGCAAGC TGCCGATCACGCTGGACAAGAAGGCGCAGGACAATCCGAGCTATGCATCGTACTCGAACCCGGTGCCGTACTATTTCAGC AGCCCTAACCCGCCTGTCGAAATGAGCTACAGCGAAGGCCTGTACCTGGGCTATCGCGGTTACGACAAGAAGCACACCAA ACCGCTCTACCCATTCGGTTTCGGGCTTTCGTATACCACCTATGCGTACAGCGATCTGAAGCTGTCGAGCAACGTGCTGG CACCGGGCGCGACCATTCAGGCGTCGTTCAAGGTGACCAACACGGGTGACAAGGCCGGTTTTGAAGTGGCTCAGTTGTAC GTGCAGCCTTCAAAGCCGCTGGTTGATCGTCCGGAGAAAGAGCTGAAGGGCTTTTCCAAGGTTTACCTGAAGCCTGGCGA AAGCAAGACCGTGACCATTGCACTGGACTCGCGCTCGTTCGCGTACTACTCAGCCAACTCGGTGAGCTGGAACGTTGACC CTGGCAAGTTCAAGGTGCTGGTGGGCAAGGACTCGGAAAACCTGACGCTCGACCGCACGGTTGTAGCGTTGTACCCGGAG CAATTGACCACTCGCGACTCCAACCCGCTGCCGATCCCCCTGCGCAAGGCCGTACAGGTCAAGGCAGAACAAGCTTACTA A
Upstream 100 bases:
>100_bases ACGGCGCGCAAACGGTGGTGGATGCACCGATCGACACTGCTGACGCCCCTGCCGGCAATGAAGACCACTGAGTGACCCAC TGACTGCAACCGATCAATCA
Downstream 100 bases:
>100_bases GCAACATCCCCAAACCAAAGGCATCGGTGGTCGACAGGACCACCGATGCCTGTCTGGTAAATGCTCGCAGCTCAGCGTGC CGCCAGATCCCGCGCCAGTC
Product: Beta-glucosidase
Products: NA
Alternate protein names: Beta-D-glucoside glucohydrolase; Cellobiase; Gentiobiase [H]
Number of amino acids: Translated: 906; Mature: 906
Protein sequence:
>906_residues MNDVRNNSVSMIKQGLGLSLLALGIAQAGSVFAVTPMTGNEVEARVGAMLDNMTQSEKINFSRVDDGRMIPKLDKFNLQG TVAYDSAMGVLVGGKTFGAQYPSPSALAATWSINRAKEFGLAIGYETRIAGGQQMLSPAINLYRTPFNGRAAEYMSGEDP FLGAVLAPAVTNGIQVQGVQAAAKHYLMNEQEANRHYLDVKIDERAMQELYLPGFESLVKNSNIASIMCGYNKINGEYAC ENHHLITDILKGQWGFQGNVMSDFNSVQDAFKGAWAGTDIDMPSGLQFTEAKLLPYVWNGQLHQNVIDDKVRRNLRALVS YGFDKGINKAQPLEHREYGQLAALNVARESIVLLRNEPVDGQKPVLPLSRNARIAVIGDMAMQPPTAPFGTAYSAPASYV TEVSGLKQLASDPSNVDYLPQMSLNPKSSVWYQPGSDQQAISNTGVKAEYYANTSLSGDPVATRVEPGVNLDWITNTNVT DYGSSAVNGYSPSAGSFSARFTGKIKPTITGPQVFKVRADGAYKLWINDELVLEDEGAQVSFDLIPVVPRTVKTPNLKAG SEYNVRLEYRRLKGNFTPVLGGMNGVQMSWAALRPPKNLGDYDAVVVAAGNNFEYEGESLDRPFELPQFQSELIGFIQKA NPKTIVVLHGGGGMDMQPWADKVAASLHAWYPGQQGGQALAEILFGKVNPSGKLPITLDKKAQDNPSYASYSNPVPYYFS SPNPPVEMSYSEGLYLGYRGYDKKHTKPLYPFGFGLSYTTYAYSDLKLSSNVLAPGATIQASFKVTNTGDKAGFEVAQLY VQPSKPLVDRPEKELKGFSKVYLKPGESKTVTIALDSRSFAYYSANSVSWNVDPGKFKVLVGKDSENLTLDRTVVALYPE QLTTRDSNPLPIPLRKAVQVKAEQAY
Sequences:
>Translated_906_residues MNDVRNNSVSMIKQGLGLSLLALGIAQAGSVFAVTPMTGNEVEARVGAMLDNMTQSEKINFSRVDDGRMIPKLDKFNLQG TVAYDSAMGVLVGGKTFGAQYPSPSALAATWSINRAKEFGLAIGYETRIAGGQQMLSPAINLYRTPFNGRAAEYMSGEDP FLGAVLAPAVTNGIQVQGVQAAAKHYLMNEQEANRHYLDVKIDERAMQELYLPGFESLVKNSNIASIMCGYNKINGEYAC ENHHLITDILKGQWGFQGNVMSDFNSVQDAFKGAWAGTDIDMPSGLQFTEAKLLPYVWNGQLHQNVIDDKVRRNLRALVS YGFDKGINKAQPLEHREYGQLAALNVARESIVLLRNEPVDGQKPVLPLSRNARIAVIGDMAMQPPTAPFGTAYSAPASYV TEVSGLKQLASDPSNVDYLPQMSLNPKSSVWYQPGSDQQAISNTGVKAEYYANTSLSGDPVATRVEPGVNLDWITNTNVT DYGSSAVNGYSPSAGSFSARFTGKIKPTITGPQVFKVRADGAYKLWINDELVLEDEGAQVSFDLIPVVPRTVKTPNLKAG SEYNVRLEYRRLKGNFTPVLGGMNGVQMSWAALRPPKNLGDYDAVVVAAGNNFEYEGESLDRPFELPQFQSELIGFIQKA NPKTIVVLHGGGGMDMQPWADKVAASLHAWYPGQQGGQALAEILFGKVNPSGKLPITLDKKAQDNPSYASYSNPVPYYFS SPNPPVEMSYSEGLYLGYRGYDKKHTKPLYPFGFGLSYTTYAYSDLKLSSNVLAPGATIQASFKVTNTGDKAGFEVAQLY VQPSKPLVDRPEKELKGFSKVYLKPGESKTVTIALDSRSFAYYSANSVSWNVDPGKFKVLVGKDSENLTLDRTVVALYPE QLTTRDSNPLPIPLRKAVQVKAEQAY >Mature_906_residues MNDVRNNSVSMIKQGLGLSLLALGIAQAGSVFAVTPMTGNEVEARVGAMLDNMTQSEKINFSRVDDGRMIPKLDKFNLQG TVAYDSAMGVLVGGKTFGAQYPSPSALAATWSINRAKEFGLAIGYETRIAGGQQMLSPAINLYRTPFNGRAAEYMSGEDP FLGAVLAPAVTNGIQVQGVQAAAKHYLMNEQEANRHYLDVKIDERAMQELYLPGFESLVKNSNIASIMCGYNKINGEYAC ENHHLITDILKGQWGFQGNVMSDFNSVQDAFKGAWAGTDIDMPSGLQFTEAKLLPYVWNGQLHQNVIDDKVRRNLRALVS YGFDKGINKAQPLEHREYGQLAALNVARESIVLLRNEPVDGQKPVLPLSRNARIAVIGDMAMQPPTAPFGTAYSAPASYV TEVSGLKQLASDPSNVDYLPQMSLNPKSSVWYQPGSDQQAISNTGVKAEYYANTSLSGDPVATRVEPGVNLDWITNTNVT DYGSSAVNGYSPSAGSFSARFTGKIKPTITGPQVFKVRADGAYKLWINDELVLEDEGAQVSFDLIPVVPRTVKTPNLKAG SEYNVRLEYRRLKGNFTPVLGGMNGVQMSWAALRPPKNLGDYDAVVVAAGNNFEYEGESLDRPFELPQFQSELIGFIQKA NPKTIVVLHGGGGMDMQPWADKVAASLHAWYPGQQGGQALAEILFGKVNPSGKLPITLDKKAQDNPSYASYSNPVPYYFS SPNPPVEMSYSEGLYLGYRGYDKKHTKPLYPFGFGLSYTTYAYSDLKLSSNVLAPGATIQASFKVTNTGDKAGFEVAQLY VQPSKPLVDRPEKELKGFSKVYLKPGESKTVTIALDSRSFAYYSANSVSWNVDPGKFKVLVGKDSENLTLDRTVVALYPE QLTTRDSNPLPIPLRKAVQVKAEQAY
Specific function: Involved in modifying a vir-inducing plant signal molecule. Hydrolyzes coniferin but not cellobiose [H]
COG id: COG1472
COG function: function code G; Beta-glucosidase-related glycosidases
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 3 family [H]
Homologues:
Organism=Escherichia coli, GI1788453, Length=265, Percent_Identity=35.0943396226415, Blast_Score=163, Evalue=6e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019800 - InterPro: IPR002772 - InterPro: IPR001764 - InterPro: IPR017853 - InterPro: IPR011658 [H]
Pfam domain/function: PF00933 Glyco_hydro_3; PF01915 Glyco_hydro_3_C [H]
EC number: =3.2.1.21 [H]
Molecular weight: Translated: 98809; Mature: 98809
Theoretical pI: Translated: 7.03; Mature: 7.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDVRNNSVSMIKQGLGLSLLALGIAQAGSVFAVTPMTGNEVEARVGAMLDNMTQSEKIN CCCCCCCHHHHHHHCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHCCCHHHCCC FSRVDDGRMIPKLDKFNLQGTVAYDSAMGVLVGGKTFGAQYPSPSALAATWSINRAKEFG EEECCCCCCCCCCCCCCCEEEEEECCCCEEEECCEECCCCCCCCCCEEEEEECCCHHHCC LAIGYETRIAGGQQMLSPAINLYRTPFNGRAAEYMSGEDPFLGAVLAPAVTNGIQVQGVQ EEECCEEECCCCHHHHHHHHHHEECCCCCCHHHHCCCCCCHHHHHHHHHHCCCEEEEEHH AAAKHYLMNEQEANRHYLDVKIDERAMQELYLPGFESLVKNSNIASIMCGYNKINGEYAC HHHHHHHCCCCCCCCEEEEEEECHHHHHHHCCCCHHHHHCCCCCEEEEECCEECCCCEEE ENHHLITDILKGQWGFQGNVMSDFNSVQDAFKGAWAGTDIDMPSGLQFTEAKLLPYVWNG CCCCEEHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEHHHEECEEEECC QLHQNVIDDKVRRNLRALVSYGFDKGINKAQPLEHREYGQLAALNVARESIVLLRNEPVD CHHHHHHHHHHHHHHHHHHHHCHHCCCCCCCCCCCHHCCCEEEEHHCCCEEEEEECCCCC GQKPVLPLSRNARIAVIGDMAMQPPTAPFGTAYSAPASYVTEVSGLKQLASDPSNVDYLP CCCCEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC QMSLNPKSSVWYQPGSDQQAISNTGVKAEYYANTSLSGDPVATRVEPGVNLDWITNTNVT CCCCCCCCCEEECCCCCCHHHHCCCCEEEEEECCCCCCCCCEEEECCCCCEEEEECCCCC DYGSSAVNGYSPSAGSFSARFTGKIKPTITGPQVFKVRADGAYKLWINDELVLEDEGAQV CCCCCCCCCCCCCCCCEEEEEEEEECCEECCCEEEEEECCCEEEEEECCEEEEECCCCEE SFDLIPVVPRTVKTPNLKAGSEYNVRLEYRRLKGNFTPVLGGMNGVQMSWAALRPPKNLG EEEEEECCCCCCCCCCCCCCCEEEEEEEEEEECCCCCEEECCCCCCEEEEEECCCCCCCC DYDAVVVAAGNNFEYEGESLDRPFELPQFQSELIGFIQKANPKTIVVLHGGGGMDMQPWA CCCEEEEEECCCCEECCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHH DKVAASLHAWYPGQQGGQALAEILFGKVNPSGKLPITLDKKAQDNPSYASYSNPVPYYFS HHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEC SPNPPVEMSYSEGLYLGYRGYDKKHTKPLYPFGFGLSYTTYAYSDLKLSSNVLAPGATIQ CCCCCEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCEECCCCEEE ASFKVTNTGDKAGFEVAQLYVQPSKPLVDRPEKELKGFSKVYLKPGESKTVTIALDSRSF EEEEEECCCCCCCCEEEEEEECCCCCCCCCCHHHHCCCEEEEECCCCCCEEEEEECCCCE AYYSANSVSWNVDPGKFKVLVGKDSENLTLDRTVVALYPEQLTTRDSNPLPIPLRKAVQV EEEECCCEEEECCCCEEEEEEECCCCCEEEEEEEEEECCHHHHCCCCCCCCCCHHHHHEE KAEQAY EECCCC >Mature Secondary Structure MNDVRNNSVSMIKQGLGLSLLALGIAQAGSVFAVTPMTGNEVEARVGAMLDNMTQSEKIN CCCCCCCHHHHHHHCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHCCCHHHCCC FSRVDDGRMIPKLDKFNLQGTVAYDSAMGVLVGGKTFGAQYPSPSALAATWSINRAKEFG EEECCCCCCCCCCCCCCCEEEEEECCCCEEEECCEECCCCCCCCCCEEEEEECCCHHHCC LAIGYETRIAGGQQMLSPAINLYRTPFNGRAAEYMSGEDPFLGAVLAPAVTNGIQVQGVQ EEECCEEECCCCHHHHHHHHHHEECCCCCCHHHHCCCCCCHHHHHHHHHHCCCEEEEEHH AAAKHYLMNEQEANRHYLDVKIDERAMQELYLPGFESLVKNSNIASIMCGYNKINGEYAC HHHHHHHCCCCCCCCEEEEEEECHHHHHHHCCCCHHHHHCCCCCEEEEECCEECCCCEEE ENHHLITDILKGQWGFQGNVMSDFNSVQDAFKGAWAGTDIDMPSGLQFTEAKLLPYVWNG CCCCEEHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEHHHEECEEEECC QLHQNVIDDKVRRNLRALVSYGFDKGINKAQPLEHREYGQLAALNVARESIVLLRNEPVD CHHHHHHHHHHHHHHHHHHHHCHHCCCCCCCCCCCHHCCCEEEEHHCCCEEEEEECCCCC GQKPVLPLSRNARIAVIGDMAMQPPTAPFGTAYSAPASYVTEVSGLKQLASDPSNVDYLP CCCCEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC QMSLNPKSSVWYQPGSDQQAISNTGVKAEYYANTSLSGDPVATRVEPGVNLDWITNTNVT CCCCCCCCCEEECCCCCCHHHHCCCCEEEEEECCCCCCCCCEEEECCCCCEEEEECCCCC DYGSSAVNGYSPSAGSFSARFTGKIKPTITGPQVFKVRADGAYKLWINDELVLEDEGAQV CCCCCCCCCCCCCCCCEEEEEEEEECCEECCCEEEEEECCCEEEEEECCEEEEECCCCEE SFDLIPVVPRTVKTPNLKAGSEYNVRLEYRRLKGNFTPVLGGMNGVQMSWAALRPPKNLG EEEEEECCCCCCCCCCCCCCCEEEEEEEEEEECCCCCEEECCCCCCEEEEEECCCCCCCC DYDAVVVAAGNNFEYEGESLDRPFELPQFQSELIGFIQKANPKTIVVLHGGGGMDMQPWA CCCEEEEEECCCCEECCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHH DKVAASLHAWYPGQQGGQALAEILFGKVNPSGKLPITLDKKAQDNPSYASYSNPVPYYFS HHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEC SPNPPVEMSYSEGLYLGYRGYDKKHTKPLYPFGFGLSYTTYAYSDLKLSSNVLAPGATIQ CCCCCEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCEECCCCEEE ASFKVTNTGDKAGFEVAQLYVQPSKPLVDRPEKELKGFSKVYLKPGESKTVTIALDSRSF EEEEEECCCCCCCCEEEEEEECCCCCCCCCCHHHHCCCEEEEECCCCCCEEEEEECCCCE AYYSANSVSWNVDPGKFKVLVGKDSENLTLDRTVVALYPEQLTTRDSNPLPIPLRKAVQV EEEECCCEEEECCCCEEEEEEECCCCCEEEEEEEEEECCHHHHCCCCCCCCCCHHHHHEE KAEQAY EECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1537792 [H]