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The map label for this gene is yafS [H]

Identifier: 66045007

GI number: 66045007

Start: 2003889

End: 2004650

Strand: Direct

Name: yafS [H]

Synonym: Psyr_1762

Alternate gene names: 66045007

Gene position: 2003889-2004650 (Clockwise)

Preceding gene: 66044998

Following gene: 66045008

Centisome position: 32.88

GC content: 63.12

Gene sequence:

>762_bases
ATGACCGATGAAGCGTTCGCTCAGGCTGATCCTGAGTGGCTTGCATTGATCCGCGCTGCCCGCGAATGGCTTTCCGGGCC
GCTCGGGCAGCTTCTGCTCGAAGAGGAGCGGCGCATTCTCGACGAGGAACTGGGGCGGTATTTCGGTGGCTATCTGGTGC
ATTACGGCCCGTCGGCGCAAAGCCCTCCGGTGGCTCCCCAGGTGCAGCGCAATGTACGCCTTGGTGCGCCATTGCCGGGT
GTCGAGATCGTCTGTGAAGAACAGGCGTGGCCATTGAGTGAGCACGCGGCCGATGTCGTGGTACTGCAACACGGCCTGGA
TTTCTGCCTGTCGCCCCACGGCCTGCTGCGCGAAGCGGCCAGCAGCGTGCGACCGGGCGGGCACTTGCTGATTATCGGTA
TCAACCCCTGGAGCACCTGGGGCATACGCCATGTATTCGCCCGGGATGCGCTGCGCAAGGCACGCTGCATTTCATCCTCG
CGGGTCGCTGACTGGCTGAATCTGCTGGGCTTCGCGCTGGAGAAACGACGCTTCGGATGCTATCGTCCGCCCCTTGCTTC
AGCAGCATGGCAGTCGCGTCTTGCAGGGCTTGAACGCCTTGGCGAGGGACGTCAGAGCCCCGGTGGCGGCTTCTATGTAC
TGGTGGCGCGCAAACTGGTGGTAGGCCTCAGGCCTTTGCGCCAAGTGCGCCGTGACCCGATCGGCAAGCTGATTCCCATG
CCGATGGCCAAGGTCAGCCGCAATACTCAGGATCAGGCTTGA

Upstream 100 bases:

>100_bases
GGGCGTGGATCTGTATCATGGCGCAGTTCGCATAGCGGCGGACAATGGTGCATCTTAGAGTCTGTTGCCGCTGTATGCGA
GCACCTCTGGAGGAGAACTC

Downstream 100 bases:

>100_bases
GCAATGCCATGCCGCAAATGAAGCCCATCATTCTGGAAAGGTCGTAATGAGCGATAGCGTTGAACTCTTCACCGACGGTG
CCTGCAAGGGTAATCCTGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 252

Protein sequence:

>253_residues
MTDEAFAQADPEWLALIRAAREWLSGPLGQLLLEEERRILDEELGRYFGGYLVHYGPSAQSPPVAPQVQRNVRLGAPLPG
VEIVCEEQAWPLSEHAADVVVLQHGLDFCLSPHGLLREAASSVRPGGHLLIIGINPWSTWGIRHVFARDALRKARCISSS
RVADWLNLLGFALEKRRFGCYRPPLASAAWQSRLAGLERLGEGRQSPGGGFYVLVARKLVVGLRPLRQVRRDPIGKLIPM
PMAKVSRNTQDQA

Sequences:

>Translated_253_residues
MTDEAFAQADPEWLALIRAAREWLSGPLGQLLLEEERRILDEELGRYFGGYLVHYGPSAQSPPVAPQVQRNVRLGAPLPG
VEIVCEEQAWPLSEHAADVVVLQHGLDFCLSPHGLLREAASSVRPGGHLLIIGINPWSTWGIRHVFARDALRKARCISSS
RVADWLNLLGFALEKRRFGCYRPPLASAAWQSRLAGLERLGEGRQSPGGGFYVLVARKLVVGLRPLRQVRRDPIGKLIPM
PMAKVSRNTQDQA
>Mature_252_residues
TDEAFAQADPEWLALIRAAREWLSGPLGQLLLEEERRILDEELGRYFGGYLVHYGPSAQSPPVAPQVQRNVRLGAPLPGV
EIVCEEQAWPLSEHAADVVVLQHGLDFCLSPHGLLREAASSVRPGGHLLIIGINPWSTWGIRHVFARDALRKARCISSSR
VADWLNLLGFALEKRRFGCYRPPLASAAWQSRLAGLERLGEGRQSPGGGFYVLVARKLVVGLRPLRQVRRDPIGKLIPMP
MAKVSRNTQDQA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081700, Length=218, Percent_Identity=28.4403669724771, Blast_Score=69, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: NA

Molecular weight: Translated: 28030; Mature: 27899

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDEAFAQADPEWLALIRAAREWLSGPLGQLLLEEERRILDEELGRYFGGYLVHYGPSAQ
CCCCHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCC
SPPVAPQVQRNVRLGAPLPGVEIVCEEQAWPLSEHAADVVVLQHGLDFCLSPHGLLREAA
CCCCCHHHHHCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHCHHHHCCCHHHHHHHH
SSVRPGGHLLIIGINPWSTWGIRHVFARDALRKARCISSSRVADWLNLLGFALEKRRFGC
HHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
YRPPLASAAWQSRLAGLERLGEGRQSPGGGFYVLVARKLVVGLRPLRQVRRDPIGKLIPM
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PMAKVSRNTQDQA
CHHHHCCCCCCCC
>Mature Secondary Structure 
TDEAFAQADPEWLALIRAAREWLSGPLGQLLLEEERRILDEELGRYFGGYLVHYGPSAQ
CCCHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCC
SPPVAPQVQRNVRLGAPLPGVEIVCEEQAWPLSEHAADVVVLQHGLDFCLSPHGLLREAA
CCCCCHHHHHCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHCHHHHCCCHHHHHHHH
SSVRPGGHLLIIGINPWSTWGIRHVFARDALRKARCISSSRVADWLNLLGFALEKRRFGC
HHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
YRPPLASAAWQSRLAGLERLGEGRQSPGGGFYVLVARKLVVGLRPLRQVRRDPIGKLIPM
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PMAKVSRNTQDQA
CHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]