| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66044990
Identifier: 66044990
GI number: 66044990
Start: 1982472
End: 1983302
Strand: Direct
Name: 66044990
Synonym: Psyr_1745
Alternate gene names: NA
Gene position: 1982472-1983302 (Clockwise)
Preceding gene: 66044987
Following gene: 66044991
Centisome position: 32.53
GC content: 55.48
Gene sequence:
>831_bases TTGTACGACTCGCCAATCGCGCGGGTCTCTGTCCTTGCTGCTGGAATCTGGCCGGATTATGTAGCGGTTGATAGTGCTGT ACAAGGCGCTGCCTTGAGCACAGGAGGCGCCCCGGCGCTTCCTTCTCCCCATTCAGTCGTATCCAGCCAGGCGCTCTGCT CTGGGATGCTGCCGTTTTTTTCGACAGCGTGCGGTGCTTCTATCGATGCGTTTGGCGTGTGTAAAACCTGGCAGGCACAG ATGATTTCTCTGGTTGGCGGTGGCATTCGATTACGCATTGACGTCGCATTCGATACACACCTTCTGGCGGTTGATCAAAG GACTTATTTGCGTAAAAAATTGTCAGTCCCGTCAAATGCTTGCAATGGGTGGCGCGTCATCGCCACGTTGTGTACGATGC GCGCCGGGTTGAATCAGGCTGGAAGCTGCCTTGCGCCATTGAATCAGTACATCAAAAAGTGCATTGATTTCAGGCGTCAA GGCTGGAGCCTGGCGTGGCAGGTTTCTGGAGATTTCGTTTTGTACTCTCCGTTCGCCATGACACATGTGACGTCGAGTGA GTGCTCGGGTCGCGAGAAAAAAGCCGCCTCGAGCGGTTTTTTTGTTTCAGCGTATTCGCTTTACCGTCTCGCTGGTCGAC TGGCCTTTTCGCCGTCGGTCGAGTGGGGCGCGCTACATGGACGGGGCCGGTCGTCTCCGGTGCTGATGCTTCTTTATATA GAAGCCGTGCCAGACGCGTCGCCGAGGGTGCAAGGCTCTGTTCTTCCTTGCGCCGCTGCGCTCCGCTCTCGTCCTATAAA TCCGCCCTTTTTCAGTAGGGTGACTTCTTGA
Upstream 100 bases:
>100_bases AATCATCTTGTACATGGTTTTTCCTGAGGGGTATCAATGTGTAGGGCATTGATTTGTTGAATATTTAAACGCTCTATCGC GCTATCGACGCAGCGCGAAA
Downstream 100 bases:
>100_bases GTATGACCCACTAGAATGCATGCCCTTGATTCTGGGGTCGGAAACGGCCGGCTAACGTCTGTGCAACGAGGAATATCCAT GCAAGTTTCTGTTGAAAACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 276; Mature: 276
Protein sequence:
>276_residues MYDSPIARVSVLAAGIWPDYVAVDSAVQGAALSTGGAPALPSPHSVVSSQALCSGMLPFFSTACGASIDAFGVCKTWQAQ MISLVGGGIRLRIDVAFDTHLLAVDQRTYLRKKLSVPSNACNGWRVIATLCTMRAGLNQAGSCLAPLNQYIKKCIDFRRQ GWSLAWQVSGDFVLYSPFAMTHVTSSECSGREKKAASSGFFVSAYSLYRLAGRLAFSPSVEWGALHGRGRSSPVLMLLYI EAVPDASPRVQGSVLPCAAALRSRPINPPFFSRVTS
Sequences:
>Translated_276_residues MYDSPIARVSVLAAGIWPDYVAVDSAVQGAALSTGGAPALPSPHSVVSSQALCSGMLPFFSTACGASIDAFGVCKTWQAQ MISLVGGGIRLRIDVAFDTHLLAVDQRTYLRKKLSVPSNACNGWRVIATLCTMRAGLNQAGSCLAPLNQYIKKCIDFRRQ GWSLAWQVSGDFVLYSPFAMTHVTSSECSGREKKAASSGFFVSAYSLYRLAGRLAFSPSVEWGALHGRGRSSPVLMLLYI EAVPDASPRVQGSVLPCAAALRSRPINPPFFSRVTS >Mature_276_residues MYDSPIARVSVLAAGIWPDYVAVDSAVQGAALSTGGAPALPSPHSVVSSQALCSGMLPFFSTACGASIDAFGVCKTWQAQ MISLVGGGIRLRIDVAFDTHLLAVDQRTYLRKKLSVPSNACNGWRVIATLCTMRAGLNQAGSCLAPLNQYIKKCIDFRRQ GWSLAWQVSGDFVLYSPFAMTHVTSSECSGREKKAASSGFFVSAYSLYRLAGRLAFSPSVEWGALHGRGRSSPVLMLLYI EAVPDASPRVQGSVLPCAAALRSRPINPPFFSRVTS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29460; Mature: 29460
Theoretical pI: Translated: 9.50; Mature: 9.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYDSPIARVSVLAAGIWPDYVAVDSAVQGAALSTGGAPALPSPHSVVSSQALCSGMLPFF CCCCHHHHHHHHHHCCCCCHHHHHHHHCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHH STACGASIDAFGVCKTWQAQMISLVGGGIRLRIDVAFDTHLLAVDQRTYLRKKLSVPSNA HHHHCCCCCHHHCHHHHHHHHHHHHCCCEEEEEEEEECCEEEEECHHHHHHHHHCCCCCC CNGWRVIATLCTMRAGLNQAGSCLAPLNQYIKKCIDFRRQGWSLAWQVSGDFVLYSPFAM CCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEECCHHH THVTSSECSGREKKAASSGFFVSAYSLYRLAGRLAFSPSVEWGALHGRGRSSPVLMLLYI EEECCHHCCCCHHHHCCCCCCHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCEEEEEEE EAVPDASPRVQGSVLPCAAALRSRPINPPFFSRVTS EECCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHCCC >Mature Secondary Structure MYDSPIARVSVLAAGIWPDYVAVDSAVQGAALSTGGAPALPSPHSVVSSQALCSGMLPFF CCCCHHHHHHHHHHCCCCCHHHHHHHHCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHH STACGASIDAFGVCKTWQAQMISLVGGGIRLRIDVAFDTHLLAVDQRTYLRKKLSVPSNA HHHHCCCCCHHHCHHHHHHHHHHHHCCCEEEEEEEEECCEEEEECHHHHHHHHHCCCCCC CNGWRVIATLCTMRAGLNQAGSCLAPLNQYIKKCIDFRRQGWSLAWQVSGDFVLYSPFAM CCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEECCHHH THVTSSECSGREKKAASSGFFVSAYSLYRLAGRLAFSPSVEWGALHGRGRSSPVLMLLYI EEECCHHCCCCHHHHCCCCCCHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCEEEEEEE EAVPDASPRVQGSVLPCAAALRSRPINPPFFSRVTS EECCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA