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The map label for this gene is 66044948

Identifier: 66044948

GI number: 66044948

Start: 1912821

End: 1913873

Strand: Reverse

Name: 66044948

Synonym: Psyr_1703

Alternate gene names: NA

Gene position: 1913873-1912821 (Counterclockwise)

Preceding gene: 66044952

Following gene: 66044936

Centisome position: 31.41

GC content: 52.71

Gene sequence:

>1053_bases
ATGCAGACCGTCCAACGATTTCACTGTACAAATGCACTAAAACTTGAACTGACGTGTCTTTATAAAAAGAATAACTGGCG
ATGGCTATTGGGTTGGTCGGGGGATGTTCTTGTCATTGCTTCCGCTGTCGCACTTACCCAATGGTCATTGTATGCTTACC
CCCTCAGTGTGCTGATTATCGGTTCACGGCAACGCGCCCTTGCCTCTCTCGTTCATGAAGCAGCCCATTTAACCCTGACC
CAAAGCCGCCGCCTCAGTTATGCCATTGGCCACTACCTGACCGGATTACCCATCTTTCAGGATTACGAGGCTTATCGACA
TTCGCATGTGCACATGCATCACCATCATCTCGGTGACGCCGACAAGGACCCGGACTATCGTTACTATATTGAATCCGGGC
TGCAGGCGACCGAAGATCGATTCGACTTCATGTTCAACCACCTGCTTAGAACCGTGCTGTTTCTGAATATATTCAGCTAC
CTGCGCTACCTCGTCATTCATCGGTTGGGCGCACTGTTGAAATCCCCTCGCAAAGCCCTGACACTGATCGCGGTACACGC
TGTTTTATTCTCGCTTTTCTATGCCACCACGGGCGTGTACGGTTACTTGATGTTCTGGCTCGTTCCTTATCTGACGGCCT
TTCAGGTCATCGGCTGGCTGTCGGAAGTTTCTGAACATTTTGGATTATTCGGCAGGGAGCAGGAGGCCTTGCGTATCACC
CGCAACCGTTTTCCCTCCTGGTGGGAGAGGCTGTTTATCGGCATGCACGGGGACAACCTGCACCTGACCCATCACCTGTT
CGCAGGCATCCCCTACTGGAACCTGCACAAGGCACACTCCATTCTCCTGCAAGACCCTGACTATGCCGAAGCCAATCTGG
CCAAGGGTGGCATCATCTCGGGTCGTCGCGATACGCAATCGGTCATGCGCCAGATACTGAGTATTTATCGCCTGCAAAAC
AGACGTCATTCGCCATACGGCACTGCACCGCAGACACTGTGCGAACAGTCGGCACGAGAAGGTACGCAGACCACGAATGG
CGATGACCGATAG

Upstream 100 bases:

>100_bases
CTGTAAAAAATAGCAGCTTACGCGGCTCCCCGCCCCTCTCTAGTCTATATAACGCCCTAATTACCAACGCATTGCAGAGC
ACAACCTGTCGAGGTAAACG

Downstream 100 bases:

>100_bases
CCATCGCGCGGGCATCCAGATGGGGTCAATGAGCATTCCGATCGGCCTCGCGCTGTGTCGGAATCGCACAAGAAGAATCC
AGGCTCACTCAACGCGTTGA

Product: Fatty acid desaturase

Products: NA

Alternate protein names: Fatty Acid Desaturase Family Protein; Dihydrorhizobitoxine Desaturase; Fatty Acid Desaturase Subfamily; Fatty Acid Desaturase Subfamily Protein; Fatty Acid Desaturase Protein; Fatty Acid Desaturase Family Proteiin; Fatty Acid Desaturase Involved In Xenocoumacin Synthesis

Number of amino acids: Translated: 350; Mature: 350

Protein sequence:

>350_residues
MQTVQRFHCTNALKLELTCLYKKNNWRWLLGWSGDVLVIASAVALTQWSLYAYPLSVLIIGSRQRALASLVHEAAHLTLT
QSRRLSYAIGHYLTGLPIFQDYEAYRHSHVHMHHHHLGDADKDPDYRYYIESGLQATEDRFDFMFNHLLRTVLFLNIFSY
LRYLVIHRLGALLKSPRKALTLIAVHAVLFSLFYATTGVYGYLMFWLVPYLTAFQVIGWLSEVSEHFGLFGREQEALRIT
RNRFPSWWERLFIGMHGDNLHLTHHLFAGIPYWNLHKAHSILLQDPDYAEANLAKGGIISGRRDTQSVMRQILSIYRLQN
RRHSPYGTAPQTLCEQSAREGTQTTNGDDR

Sequences:

>Translated_350_residues
MQTVQRFHCTNALKLELTCLYKKNNWRWLLGWSGDVLVIASAVALTQWSLYAYPLSVLIIGSRQRALASLVHEAAHLTLT
QSRRLSYAIGHYLTGLPIFQDYEAYRHSHVHMHHHHLGDADKDPDYRYYIESGLQATEDRFDFMFNHLLRTVLFLNIFSY
LRYLVIHRLGALLKSPRKALTLIAVHAVLFSLFYATTGVYGYLMFWLVPYLTAFQVIGWLSEVSEHFGLFGREQEALRIT
RNRFPSWWERLFIGMHGDNLHLTHHLFAGIPYWNLHKAHSILLQDPDYAEANLAKGGIISGRRDTQSVMRQILSIYRLQN
RRHSPYGTAPQTLCEQSAREGTQTTNGDDR
>Mature_350_residues
MQTVQRFHCTNALKLELTCLYKKNNWRWLLGWSGDVLVIASAVALTQWSLYAYPLSVLIIGSRQRALASLVHEAAHLTLT
QSRRLSYAIGHYLTGLPIFQDYEAYRHSHVHMHHHHLGDADKDPDYRYYIESGLQATEDRFDFMFNHLLRTVLFLNIFSY
LRYLVIHRLGALLKSPRKALTLIAVHAVLFSLFYATTGVYGYLMFWLVPYLTAFQVIGWLSEVSEHFGLFGREQEALRIT
RNRFPSWWERLFIGMHGDNLHLTHHLFAGIPYWNLHKAHSILLQDPDYAEANLAKGGIISGRRDTQSVMRQILSIYRLQN
RRHSPYGTAPQTLCEQSAREGTQTTNGDDR

Specific function: Unknown

COG id: COG3239

COG function: function code I; Fatty acid desaturase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40573; Mature: 40573

Theoretical pI: Translated: 9.38; Mature: 9.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTVQRFHCTNALKLELTCLYKKNNWRWLLGWSGDVLVIASAVALTQWSLYAYPLSVLII
CCCHHHHHCCCCEEEEEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCEEHEEE
GSRQRALASLVHEAAHLTLTQSRRLSYAIGHYLTGLPIFQDYEAYRHSHVHMHHHHLGDA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEHHHHCCCC
DKDPDYRYYIESGLQATEDRFDFMFNHLLRTVLFLNIFSYLRYLVIHRLGALLKSPRKAL
CCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
TLIAVHAVLFSLFYATTGVYGYLMFWLVPYLTAFQVIGWLSEVSEHFGLFGREQEALRIT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
RNRFPSWWERLFIGMHGDNLHLTHHLFAGIPYWNLHKAHSILLQDPDYAEANLAKGGIIS
HHCCHHHHHHHHHCCCCCCEEEHHHHHHCCCCCCHHHHHHEEECCCCCCHHHCCCCCCCC
GRRDTQSVMRQILSIYRLQNRRHSPYGTAPQTLCEQSAREGTQTTNGDDR
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MQTVQRFHCTNALKLELTCLYKKNNWRWLLGWSGDVLVIASAVALTQWSLYAYPLSVLII
CCCHHHHHCCCCEEEEEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCEEHEEE
GSRQRALASLVHEAAHLTLTQSRRLSYAIGHYLTGLPIFQDYEAYRHSHVHMHHHHLGDA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEHHHHCCCC
DKDPDYRYYIESGLQATEDRFDFMFNHLLRTVLFLNIFSYLRYLVIHRLGALLKSPRKAL
CCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
TLIAVHAVLFSLFYATTGVYGYLMFWLVPYLTAFQVIGWLSEVSEHFGLFGREQEALRIT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
RNRFPSWWERLFIGMHGDNLHLTHHLFAGIPYWNLHKAHSILLQDPDYAEANLAKGGIIS
HHCCHHHHHHHHHCCCCCCEEEHHHHHHCCCCCCHHHHHHEEECCCCCCHHHCCCCCCCC
GRRDTQSVMRQILSIYRLQNRRHSPYGTAPQTLCEQSAREGTQTTNGDDR
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA