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The map label for this gene is yjfJ [H]

Identifier: 66044938

GI number: 66044938

Start: 1901525

End: 1902232

Strand: Direct

Name: yjfJ [H]

Synonym: Psyr_1693

Alternate gene names: 66044938

Gene position: 1901525-1902232 (Clockwise)

Preceding gene: 66044937

Following gene: 66044939

Centisome position: 31.2

GC content: 60.17

Gene sequence:

>708_bases
ATGACTACAAGTATCTGGAAAAAACTGGTGACCGCTGTTCGTGGCGGCGCTTCCGAAGTGGGCGAGTCGATTGCCGACGC
CAATGCCATCCGCATTCTGGACCAGGAAATCCGCGACGCCGAGAACGCGCTGGTCAAGGCCCGCGACGGGCTGATCACCA
TCAAGGCCAAGCACAAACTTTCGGCACAGCGTCTTGAAGAGCACGCTACCAGCATTGCCAACTGGGAAGGCCGCGCCATG
CAGGCCCTGAACAAGGGTGAAGAAGCCCTGGCCGTAGAATGCGCGAACAAGATCGCCGAAATCGAAGCCCTGCGTGATCA
GGAGCAGGAACTGGCCGACCAGTTCAGCAAGCAGGTCAACCTGCTGCAGGATCAGGTGATCAAGGCCGAATCGCGAATCA
AGAGCCTCAAGCAGCAGGTCGAGATGGCCAAGGCCCGTGAAACCGTGCAAAAGGCCCGCGTTGCAACGGCTACTGCAACC
GGTGGTGCCAGTGGCGCCGTCGAAACCGCAGTCGGCTCGCTGGCACGTCTCAAGCAGCGCCAGGATGAACAGGACGCCAA
GCTCGAAGCAGCTGAAGAACTGGCCACCCAGTCCAGCGGCAGCGATCTGGAGCGTCGTCTGCAGGATGCCGGAATCGGTG
CTAAAAGCGGCGGTGCGCAAGATGTACTGGCGCGCCTGAAAGCCAAAAGTCAGACGCCGGCTCAGTAA

Upstream 100 bases:

>100_bases
TGCAGGAAATTCTCACCCTCGCGGACAACGTGATCCGTGCGGCCGATGCTTTTGAAGATCATTTCATCTACTGAACAGCG
CTGTCAGGCGGAGAACATTC

Downstream 100 bases:

>100_bases
GCGCTGCAACAAGGCAGGCGAGGGTGGTGCATGGCGTTTTCCCGACGACTCAAGGTCATCCTCGTCCTGTCGGCCGTGTT
GATTGCGGTACAGGCATTCA

Product: PspA/IM30

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 235; Mature: 234

Protein sequence:

>235_residues
MTTSIWKKLVTAVRGGASEVGESIADANAIRILDQEIRDAENALVKARDGLITIKAKHKLSAQRLEEHATSIANWEGRAM
QALNKGEEALAVECANKIAEIEALRDQEQELADQFSKQVNLLQDQVIKAESRIKSLKQQVEMAKARETVQKARVATATAT
GGASGAVETAVGSLARLKQRQDEQDAKLEAAEELATQSSGSDLERRLQDAGIGAKSGGAQDVLARLKAKSQTPAQ

Sequences:

>Translated_235_residues
MTTSIWKKLVTAVRGGASEVGESIADANAIRILDQEIRDAENALVKARDGLITIKAKHKLSAQRLEEHATSIANWEGRAM
QALNKGEEALAVECANKIAEIEALRDQEQELADQFSKQVNLLQDQVIKAESRIKSLKQQVEMAKARETVQKARVATATAT
GGASGAVETAVGSLARLKQRQDEQDAKLEAAEELATQSSGSDLERRLQDAGIGAKSGGAQDVLARLKAKSQTPAQ
>Mature_234_residues
TTSIWKKLVTAVRGGASEVGESIADANAIRILDQEIRDAENALVKARDGLITIKAKHKLSAQRLEEHATSIANWEGRAMQ
ALNKGEEALAVECANKIAEIEALRDQEQELADQFSKQVNLLQDQVIKAESRIKSLKQQVEMAKARETVQKARVATATATG
GASGAVETAVGSLARLKQRQDEQDAKLEAAEELATQSSGSDLERRLQDAGIGAKSGGAQDVLARLKAKSQTPAQ

Specific function: Unknown

COG id: COG1842

COG function: function code KT; Phage shock protein A (IM30), suppresses sigma54-dependent transcription

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PspA/IM30 family [H]

Homologues:

Organism=Escherichia coli, GI1790625, Length=225, Percent_Identity=38.2222222222222, Blast_Score=117, Evalue=5e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007157 [H]

Pfam domain/function: PF04012 PspA_IM30 [H]

EC number: NA

Molecular weight: Translated: 25208; Mature: 25076

Theoretical pI: Translated: 6.57; Mature: 6.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTSIWKKLVTAVRGGASEVGESIADANAIRILDQEIRDAENALVKARDGLITIKAKHKL
CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHH
SAQRLEEHATSIANWEGRAMQALNKGEEALAVECANKIAEIEALRDQEQELADQFSKQVN
HHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLQDQVIKAESRIKSLKQQVEMAKARETVQKARVATATATGGASGAVETAVGSLARLKQR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
QDEQDAKLEAAEELATQSSGSDLERRLQDAGIGAKSGGAQDVLARLKAKSQTPAQ
CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TTSIWKKLVTAVRGGASEVGESIADANAIRILDQEIRDAENALVKARDGLITIKAKHKL
CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHH
SAQRLEEHATSIANWEGRAMQALNKGEEALAVECANKIAEIEALRDQEQELADQFSKQVN
HHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLQDQVIKAESRIKSLKQQVEMAKARETVQKARVATATATGGASGAVETAVGSLARLKQR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
QDEQDAKLEAAEELATQSSGSDLERRLQDAGIGAKSGGAQDVLARLKAKSQTPAQ
CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]