| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is yhhW [C]
Identifier: 66044871
GI number: 66044871
Start: 1828914
End: 1829768
Strand: Reverse
Name: yhhW [C]
Synonym: Psyr_1626
Alternate gene names: 66044871
Gene position: 1829768-1828914 (Counterclockwise)
Preceding gene: 66044872
Following gene: 66044869
Centisome position: 30.03
GC content: 59.3
Gene sequence:
>855_bases ATGACTCAATTTCGTAAAGTCCTGTCCATTCAAACGGGTCAGCCAGCGTCCGATGGCGCGGGCGTCAAACTGACGCGCGT CTTCGGCGGGCGTGGTGTGGAGCAGTTCGACCCGTTTCTGATGCTGGACGAGTTCGGATCGGACAAGCCGGATGACTACA TCGCCGGCTTTCCACCTCACCCGCACCGTGGCTTCGAAACGGTGACCTACATGCTTGAGGGCCGTATGCGTCATGAAGAC CATATGGGCAATGTCGGCCTTCTGCAGGGCGGCGGTGTGCAGTGGATGACCGCAGCACGCGGGATCATTCACAGCGAAAT GCCCGAACAGGAAGAAGGCACCATGCGCGGCTTTCAGCTCTGGCTGAACCTACCGGGCAAGAACAAGCTGAGCGACGCCA GCTATCAGGACATCCAGCCGGAAAACGTTCCGAGTATCACCACTCAGGCCGGTGTGCAGGTGGTGGTATTGGCAGGGCAT TTCGACGATGGTCAGGTTCAACAGGCCGGGGCAGTACAGCGCCCGGATACCGAGCCTCTGTACTTTGACTTTGATATGCC TGCCGGCAGTCGTATCAGCCCGCACGTACCCGACGGGCACCTTGTGTTGCTGTACGTCTATGAAGGCAGTGTCGAGCTGG AAGGCAGCGCCCAGCCGATCGGCAAACGCCATATGGCAAGGCTGTCCGACAGCGGTGCCGTACAGATCAGCAGCACCGCG GGTGCACGGCTGTTACTGATTGCAGGCAAGCCCTTGCGTGAGCCGATCGTGCAATACGGCCCTTTCGTGATGAACACCAA GGAAGAGATCGAGCAGGCGATTCGTGACTTCCGGGAAGATCGTCTGACGGCGTGA
Upstream 100 bases:
>100_bases ATCAATACGATCATTAAGTCCCGGCATTCGAATCAATTTATCGAATAGACAGGCATACCATGACACTTCGTATCATCTGA TAAGGAGTGCTCCCTCTCCC
Downstream 100 bases:
>100_bases ACCCGGTTCGGACCGTCAGACTTCCCTTCGTCTGTAGCGGCCCCTTCACCAGCAAGGCGGACCGCTTTGCTGGTGTCAGA GCAGATACGAGCGCGACTCA
Product: Pirin, N-terminal:Pirin, C-terminal
Products: NA
Alternate protein names: Putative quercetinase; Pirin-like protein PA3240 [H]
Number of amino acids: Translated: 284; Mature: 283
Protein sequence:
>284_residues MTQFRKVLSIQTGQPASDGAGVKLTRVFGGRGVEQFDPFLMLDEFGSDKPDDYIAGFPPHPHRGFETVTYMLEGRMRHED HMGNVGLLQGGGVQWMTAARGIIHSEMPEQEEGTMRGFQLWLNLPGKNKLSDASYQDIQPENVPSITTQAGVQVVVLAGH FDDGQVQQAGAVQRPDTEPLYFDFDMPAGSRISPHVPDGHLVLLYVYEGSVELEGSAQPIGKRHMARLSDSGAVQISSTA GARLLLIAGKPLREPIVQYGPFVMNTKEEIEQAIRDFREDRLTA
Sequences:
>Translated_284_residues MTQFRKVLSIQTGQPASDGAGVKLTRVFGGRGVEQFDPFLMLDEFGSDKPDDYIAGFPPHPHRGFETVTYMLEGRMRHED HMGNVGLLQGGGVQWMTAARGIIHSEMPEQEEGTMRGFQLWLNLPGKNKLSDASYQDIQPENVPSITTQAGVQVVVLAGH FDDGQVQQAGAVQRPDTEPLYFDFDMPAGSRISPHVPDGHLVLLYVYEGSVELEGSAQPIGKRHMARLSDSGAVQISSTA GARLLLIAGKPLREPIVQYGPFVMNTKEEIEQAIRDFREDRLTA >Mature_283_residues TQFRKVLSIQTGQPASDGAGVKLTRVFGGRGVEQFDPFLMLDEFGSDKPDDYIAGFPPHPHRGFETVTYMLEGRMRHEDH MGNVGLLQGGGVQWMTAARGIIHSEMPEQEEGTMRGFQLWLNLPGKNKLSDASYQDIQPENVPSITTQAGVQVVVLAGHF DDGQVQQAGAVQRPDTEPLYFDFDMPAGSRISPHVPDGHLVLLYVYEGSVELEGSAQPIGKRHMARLSDSGAVQISSTAG ARLLLIAGKPLREPIVQYGPFVMNTKEEIEQAIRDFREDRLTA
Specific function: Putative quercetin 2,3-dioxygenase [H]
COG id: COG1741
COG function: function code R; Pirin-related protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pirin family [H]
Homologues:
Organism=Homo sapiens, GI66363697, Length=286, Percent_Identity=40.5594405594406, Blast_Score=201, Evalue=7e-52, Organism=Homo sapiens, GI4505823, Length=286, Percent_Identity=40.5594405594406, Blast_Score=201, Evalue=7e-52,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011051 - InterPro: IPR012093 - InterPro: IPR008778 - InterPro: IPR003829 - InterPro: IPR014710 [H]
Pfam domain/function: PF02678 Pirin; PF05726 Pirin_C [H]
EC number: =1.13.11.24 [H]
Molecular weight: Translated: 31260; Mature: 31129
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQFRKVLSIQTGQPASDGAGVKLTRVFGGRGVEQFDPFLMLDEFGSDKPDDYIAGFPPH CCCHHHHHEECCCCCCCCCCCEEEEEEECCCCHHHHCCEEEEHHCCCCCCCCCEECCCCC PHRGFETVTYMLEGRMRHEDHMGNVGLLQGGGVQWMTAARGIIHSEMPEQEEGTMRGFQL CCCCHHHHHHHHHCCHHHHHCCCCEEEEECCCEEHHHHHHHHHHHCCCCHHCCCEEEEEE WLNLPGKNKLSDASYQDIQPENVPSITTQAGVQVVVLAGHFDDGQVQQAGAVQRPDTEPL EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHCCCCCCCCCCCE YFDFDMPAGSRISPHVPDGHLVLLYVYEGSVELEGSAQPIGKRHMARLSDSGAVQISSTA EEEECCCCCCCCCCCCCCCCEEEEEEECCCEEECCCCCCCHHHHHHHCCCCCCEEEECCC GARLLLIAGKPLREPIVQYGPFVMNTKEEIEQAIRDFREDRLTA CEEEEEEECCCHHHHHHHHCCEEECCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TQFRKVLSIQTGQPASDGAGVKLTRVFGGRGVEQFDPFLMLDEFGSDKPDDYIAGFPPH CCHHHHHEECCCCCCCCCCCEEEEEEECCCCHHHHCCEEEEHHCCCCCCCCCEECCCCC PHRGFETVTYMLEGRMRHEDHMGNVGLLQGGGVQWMTAARGIIHSEMPEQEEGTMRGFQL CCCCHHHHHHHHHCCHHHHHCCCCEEEEECCCEEHHHHHHHHHHHCCCCHHCCCEEEEEE WLNLPGKNKLSDASYQDIQPENVPSITTQAGVQVVVLAGHFDDGQVQQAGAVQRPDTEPL EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHCCCCCCCCCCCE YFDFDMPAGSRISPHVPDGHLVLLYVYEGSVELEGSAQPIGKRHMARLSDSGAVQISSTA EEEECCCCCCCCCCCCCCCCEEEEEEECCCEEECCCCCCCHHHHHHHCCCCCCEEEECCC GARLLLIAGKPLREPIVQYGPFVMNTKEEIEQAIRDFREDRLTA CEEEEEEECCCHHHHHHHHCCEEECCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]