| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66044846
Identifier: 66044846
GI number: 66044846
Start: 1800836
End: 1801489
Strand: Reverse
Name: 66044846
Synonym: Psyr_1601
Alternate gene names: NA
Gene position: 1801489-1800836 (Counterclockwise)
Preceding gene: 66044847
Following gene: 66044844
Centisome position: 29.56
GC content: 61.62
Gene sequence:
>654_bases ATGCCCTTGGCAATTTTCGACCTGGACGAAACCCTGATCGGTGGTGACTGCGCCACGCTCTGGAGCGAGCAGATGGGTCG CCTGGGCTGGGTTGACTCGACGTCGTTCATGCAACGCAACGACGAACTGATGGCCGCCTACAGCGAGGGCAAGCTCGCGA TGGAAGACTACATGGCCTTCAGCCTGGAGCCCATGGCTGGCCGTACCCCCGAAGAAATCGAGCATCTGGTCGGCCCGTGG GTCGAGGACGTCATCGAACCGATCATCTACAGCGACGCCTGCACGTGCATTGCAAAGCACCGCGCCAAGGGTGACCGGAT TCTGGTGATCTCGGCTTCGGGCGTGCACCTGGTCAAGCCGATCGCCGAACGCCTTGGCATCGACGAAGTGCTGGGTATCG AGCTGGACGTGCAGCATGGCGTCTACAGCGGGGCCACTGTCGGCGTGCTGACCTATCGGGAAGGCAAGATCACGCGCCTG ATGGAGTGGCTGGATGCCGAGGGGGAAAATCTCGAGGGCGCGAGTTTCTATTCGGATTCGCGCAATGACCTGCCGCTGCT GCTCAAGGTTGACCACCCTAACGTGGTCAACCCCGATGCCGTGTTACTGGAACACGCGCGGAAAGCAGGCTGGCCGGTGC ACGACTGGAGCTGA
Upstream 100 bases:
>100_bases GTGCGCGCTTGACTGACGCAACCGCCGAGCTTTCGCTTTCGCTTGAAGCTTGAAGCTTGAAGCTTGAAGCTAACGTAACC AACACTGAGGATAAGCACAC
Downstream 100 bases:
>100_bases GTCCAGAGGCGCCGCCGGGTCAGACCAGGCTTTCGTCGATCACCAGCACGATCTTGCCGGACACCGTATTGGTCGCCAGC TCTTCGAACGCCGCTTCGGC
Product: HAD family hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 217; Mature: 216
Protein sequence:
>217_residues MPLAIFDLDETLIGGDCATLWSEQMGRLGWVDSTSFMQRNDELMAAYSEGKLAMEDYMAFSLEPMAGRTPEEIEHLVGPW VEDVIEPIIYSDACTCIAKHRAKGDRILVISASGVHLVKPIAERLGIDEVLGIELDVQHGVYSGATVGVLTYREGKITRL MEWLDAEGENLEGASFYSDSRNDLPLLLKVDHPNVVNPDAVLLEHARKAGWPVHDWS
Sequences:
>Translated_217_residues MPLAIFDLDETLIGGDCATLWSEQMGRLGWVDSTSFMQRNDELMAAYSEGKLAMEDYMAFSLEPMAGRTPEEIEHLVGPW VEDVIEPIIYSDACTCIAKHRAKGDRILVISASGVHLVKPIAERLGIDEVLGIELDVQHGVYSGATVGVLTYREGKITRL MEWLDAEGENLEGASFYSDSRNDLPLLLKVDHPNVVNPDAVLLEHARKAGWPVHDWS >Mature_216_residues PLAIFDLDETLIGGDCATLWSEQMGRLGWVDSTSFMQRNDELMAAYSEGKLAMEDYMAFSLEPMAGRTPEEIEHLVGPWV EDVIEPIIYSDACTCIAKHRAKGDRILVISASGVHLVKPIAERLGIDEVLGIELDVQHGVYSGATVGVLTYREGKITRLM EWLDAEGENLEGASFYSDSRNDLPLLLKVDHPNVVNPDAVLLEHARKAGWPVHDWS
Specific function: Unknown
COG id: COG0560
COG function: function code E; Phosphoserine phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the serB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023214 - InterPro: IPR006383 - InterPro: IPR006385 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24066; Mature: 23934
Theoretical pI: Translated: 4.28; Mature: 4.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLAIFDLDETLIGGDCATLWSEQMGRLGWVDSTSFMQRNDELMAAYSEGKLAMEDYMAF CCEEEEECCCHHCCCHHHHHHHHHHCCCCCCCCHHHHHCCCHHEEEECCCCEEHHHHHHE SLEPMAGRTPEEIEHLVGPWVEDVIEPIIYSDACTCIAKHRAKGDRILVISASGVHLVKP ECCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHH IAERLGIDEVLGIELDVQHGVYSGATVGVLTYREGKITRLMEWLDAEGENLEGASFYSDS HHHHCCCCHHHEEEEEECCCCCCCCEEEEEEECCCHHHHHHHHHCCCCCCCCCCEECCCC RNDLPLLLKVDHPNVVNPDAVLLEHARKAGWPVHDWS CCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure PLAIFDLDETLIGGDCATLWSEQMGRLGWVDSTSFMQRNDELMAAYSEGKLAMEDYMAF CEEEEECCCHHCCCHHHHHHHHHHCCCCCCCCHHHHHCCCHHEEEECCCCEEHHHHHHE SLEPMAGRTPEEIEHLVGPWVEDVIEPIIYSDACTCIAKHRAKGDRILVISASGVHLVKP ECCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHH IAERLGIDEVLGIELDVQHGVYSGATVGVLTYREGKITRLMEWLDAEGENLEGASFYSDS HHHHCCCCHHHEEEEEECCCCCCCCEEEEEEECCCHHHHHHHHHCCCCCCCCCCEECCCC RNDLPLLLKVDHPNVVNPDAVLLEHARKAGWPVHDWS CCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]