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The map label for this gene is yfeA [H]

Identifier: 66044843

GI number: 66044843

Start: 1795744

End: 1797516

Strand: Reverse

Name: yfeA [H]

Synonym: Psyr_1598

Alternate gene names: 66044843

Gene position: 1797516-1795744 (Counterclockwise)

Preceding gene: 66044844

Following gene: 66044837

Centisome position: 29.5

GC content: 60.41

Gene sequence:

>1773_bases
ATGACCATAACAGAGCAGCTGAGCGCACTGAGTTCCATTCTGGCTCGTGGTGATTTGCACAGTTTGTTCCAACCCATCGT
CTCGCTGTCGGAACACCGGATCCTGGGCTATGAAGCCTTGACCCGCGGCCCGTCCAACAGCGCCCTGCACTCGCCCCTGA
ACCTGTTCGCCATCGCCCGCCAGGCCGGTCGTCTGAGCGAGCTGGAGTTGAGTTGTCGGGACAGCGCCTGCCGACGTTTC
AGCCAGCAGAAGTTGCCGGGCAAGCTGTTTCTCAACGTCTCCCCCGAATCGCTGCTCGAAACCTCGCATCCACCGGGGCG
GACTCTGGAGATGCTGCGTCGCTACCACATCGCGCCCAAGGACGTGGTCATCGAGTTGACCGAGCAGATGCCCACCGACG
ATTTCGACCTGCTGTACAAAGCGTTGCACCACTACCGCGACATGGGCTTTTCCATCGCGCTGGACGATCTTGGCGCCGGT
TATTCGAGCTTGCGACTCTGGTCGGAGCTGCGCCCGGACTACGTGAAAATCGATCGGCACTTCATCGACGGCATTCACCA
GGATGCGGTGAAGCGCGAATTCGTCGGCTCCATGCTGCAGATGGCCAAGGCCTCCAGAGCGACGGTCATTGCCGAAGGCA
TTGAATTGCCCGAAGAGCTGGCGACGCTGAAAGACATGGGTGTAAACCTGGTTCAAGGCTATCTGCTGGCCCGACCTCAG
GAGCGCCCGCCGCGCAACACCCGCGCCATGCCGCCCAGGACAGAAACCGCAGTAGCGCCGCTCAACGAAGAAGCGGCCGA
CCTGTCTGCCCTGCTCAATCCGCAGCCATCGGTCAGCCAGTCGACACCCACGGCTGAAGTGCTGGAAGCATTTCGCAGGC
AGGCGAACCTCAATTCTCTGGCGGTGCTGGATGACGACGCCCGACCGTGCGGCATCGTCCACCGGCATTCGTTGTCCGAG
GCCCTGCTCAAGCCCTTCGGCACCGAGCTGTTTGCCCGCAAACCGATCAGCCGTCTGATGAGCAGTGACTTTCTCGCCGC
GGAGGTCAGCCAGTCGCTGCAACAGGTCAGCCGGCTGTTGACCAGCCGTGCCCGGCAGCGCATCGAGGAGGATTTCATCA
TCACCTCGAACGGTGCCTATCTGGGCCTCGGACGAGTGATCGACGTGCTCAAGCTGATTACCGAAATGAAGATCCAGCAG
GCACGTTACGCCAACCCGCTGACCCTGCTGCCCGGCAACGTTCCGATTCAGCAATGCCTGACTCGACTGCTGCAGCAAGG
CCGTGCGTCGATGATCTGCTACGTGGACATCGACAGCTTCAAGCCCTTCAACGACATCTACGGTTATGCGCGTGGCGACG
AGGTGCTGCTGTGTCTGGCGCAATGCCTGAACGACCGCATCGATCCGGCCAGGGACTTTGTCGGGCACATCGGCGGGGAT
GATTTTCTGATGGTGCTGGGCTTTGATGACTGGGAACGACGCCTGAAAACCCTGCTGGATGATTTTCAGAATCAATGCCG
GCGTTTCTACCGCGCAGAACACCTGGAAGCCGGTTGTTTCATCGCCCTCAACCGTCAGGGCCAACGCCAGGAATTCCCCC
TGCTGTCACTGTCGATTGGCGTGGTGCACTTGCATGAAGCAAGCTGCACGCTGGTCGATGCCAGCCAATTGGCCGACCTC
GCTTCACAGGCCAAGCACTTCGCCAAGGATGTCGCCGGCGCCAGCATTCACGTCATCGATTCGACGCGACTGGATTTGTT
GATGCAGGCGTGA

Upstream 100 bases:

>100_bases
CCATTTAGCTTCAACGTCATCAAACAGTCATGAAGCTGTCGTGAAATACGGGGCTGAACGCGAAAGCGCTCAGCCCTTTT
TCATTCTCTTCGAGACGACC

Downstream 100 bases:

>100_bases
GCGCCGGCGCCATACCCCTACTGCGCTTGCACTTGCACTTGCGGATAACTGTATTCAAACACCCGAACCACTTCCGAGGC
GTGCCATGACGCTGCCGCGA

Product: GGDEF:CBS:EAL

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 590; Mature: 589

Protein sequence:

>590_residues
MTITEQLSALSSILARGDLHSLFQPIVSLSEHRILGYEALTRGPSNSALHSPLNLFAIARQAGRLSELELSCRDSACRRF
SQQKLPGKLFLNVSPESLLETSHPPGRTLEMLRRYHIAPKDVVIELTEQMPTDDFDLLYKALHHYRDMGFSIALDDLGAG
YSSLRLWSELRPDYVKIDRHFIDGIHQDAVKREFVGSMLQMAKASRATVIAEGIELPEELATLKDMGVNLVQGYLLARPQ
ERPPRNTRAMPPRTETAVAPLNEEAADLSALLNPQPSVSQSTPTAEVLEAFRRQANLNSLAVLDDDARPCGIVHRHSLSE
ALLKPFGTELFARKPISRLMSSDFLAAEVSQSLQQVSRLLTSRARQRIEEDFIITSNGAYLGLGRVIDVLKLITEMKIQQ
ARYANPLTLLPGNVPIQQCLTRLLQQGRASMICYVDIDSFKPFNDIYGYARGDEVLLCLAQCLNDRIDPARDFVGHIGGD
DFLMVLGFDDWERRLKTLLDDFQNQCRRFYRAEHLEAGCFIALNRQGQRQEFPLLSLSIGVVHLHEASCTLVDASQLADL
ASQAKHFAKDVAGASIHVIDSTRLDLLMQA

Sequences:

>Translated_590_residues
MTITEQLSALSSILARGDLHSLFQPIVSLSEHRILGYEALTRGPSNSALHSPLNLFAIARQAGRLSELELSCRDSACRRF
SQQKLPGKLFLNVSPESLLETSHPPGRTLEMLRRYHIAPKDVVIELTEQMPTDDFDLLYKALHHYRDMGFSIALDDLGAG
YSSLRLWSELRPDYVKIDRHFIDGIHQDAVKREFVGSMLQMAKASRATVIAEGIELPEELATLKDMGVNLVQGYLLARPQ
ERPPRNTRAMPPRTETAVAPLNEEAADLSALLNPQPSVSQSTPTAEVLEAFRRQANLNSLAVLDDDARPCGIVHRHSLSE
ALLKPFGTELFARKPISRLMSSDFLAAEVSQSLQQVSRLLTSRARQRIEEDFIITSNGAYLGLGRVIDVLKLITEMKIQQ
ARYANPLTLLPGNVPIQQCLTRLLQQGRASMICYVDIDSFKPFNDIYGYARGDEVLLCLAQCLNDRIDPARDFVGHIGGD
DFLMVLGFDDWERRLKTLLDDFQNQCRRFYRAEHLEAGCFIALNRQGQRQEFPLLSLSIGVVHLHEASCTLVDASQLADL
ASQAKHFAKDVAGASIHVIDSTRLDLLMQA
>Mature_589_residues
TITEQLSALSSILARGDLHSLFQPIVSLSEHRILGYEALTRGPSNSALHSPLNLFAIARQAGRLSELELSCRDSACRRFS
QQKLPGKLFLNVSPESLLETSHPPGRTLEMLRRYHIAPKDVVIELTEQMPTDDFDLLYKALHHYRDMGFSIALDDLGAGY
SSLRLWSELRPDYVKIDRHFIDGIHQDAVKREFVGSMLQMAKASRATVIAEGIELPEELATLKDMGVNLVQGYLLARPQE
RPPRNTRAMPPRTETAVAPLNEEAADLSALLNPQPSVSQSTPTAEVLEAFRRQANLNSLAVLDDDARPCGIVHRHSLSEA
LLKPFGTELFARKPISRLMSSDFLAAEVSQSLQQVSRLLTSRARQRIEEDFIITSNGAYLGLGRVIDVLKLITEMKIQQA
RYANPLTLLPGNVPIQQCLTRLLQQGRASMICYVDIDSFKPFNDIYGYARGDEVLLCLAQCLNDRIDPARDFVGHIGGDD
FLMVLGFDDWERRLKTLLDDFQNQCRRFYRAEHLEAGCFIALNRQGQRQEFPLLSLSIGVVHLHEASCTLVDASQLADLA
SQAKHFAKDVAGASIHVIDSTRLDLLMQA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GGDEF domain [H]

Homologues:

Organism=Escherichia coli, GI87082096, Length=244, Percent_Identity=29.5081967213115, Blast_Score=105, Evalue=9e-24,
Organism=Escherichia coli, GI1787055, Length=230, Percent_Identity=32.6086956521739, Blast_Score=102, Evalue=9e-23,
Organism=Escherichia coli, GI87081743, Length=230, Percent_Identity=32.1739130434783, Blast_Score=99, Evalue=8e-22,
Organism=Escherichia coli, GI1788502, Length=242, Percent_Identity=28.9256198347107, Blast_Score=92, Evalue=6e-20,
Organism=Escherichia coli, GI1787410, Length=222, Percent_Identity=25.2252252252252, Blast_Score=92, Evalue=7e-20,
Organism=Escherichia coli, GI87081845, Length=234, Percent_Identity=28.2051282051282, Blast_Score=90, Evalue=4e-19,
Organism=Escherichia coli, GI1788849, Length=223, Percent_Identity=27.3542600896861, Blast_Score=90, Evalue=4e-19,
Organism=Escherichia coli, GI226510982, Length=177, Percent_Identity=33.8983050847458, Blast_Score=88, Evalue=1e-18,
Organism=Escherichia coli, GI1790496, Length=249, Percent_Identity=25.3012048192771, Blast_Score=88, Evalue=2e-18,
Organism=Escherichia coli, GI87081921, Length=254, Percent_Identity=24.0157480314961, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI1787541, Length=223, Percent_Identity=28.6995515695067, Blast_Score=84, Evalue=4e-17,
Organism=Escherichia coli, GI87081980, Length=233, Percent_Identity=25.7510729613734, Blast_Score=73, Evalue=4e-14,
Organism=Escherichia coli, GI1786507, Length=121, Percent_Identity=30.5785123966942, Blast_Score=72, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160
- InterPro:   IPR001633
- InterPro:   IPR007895 [H]

Pfam domain/function: PF00563 EAL; PF05231 MASE1 [H]

EC number: NA

Molecular weight: Translated: 65917; Mature: 65786

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: PS50883 EAL ; PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTITEQLSALSSILARGDLHSLFQPIVSLSEHRILGYEALTRGPSNSALHSPLNLFAIAR
CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEECHHHHCCCCCCCHHHCHHHHHHHHH
QAGRLSELELSCRDSACRRFSQQKLPGKLFLNVSPESLLETSHPPGRTLEMLRRYHIAPK
HHCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHCCCCCCHHHHHHHHHCCCCH
DVVIELTEQMPTDDFDLLYKALHHYRDMGFSIALDDLGAGYSSLRLWSELRPDYVKIDRH
HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEHHHCCCHHHHHHHHHCCCCHHHHHHH
FIDGIHQDAVKREFVGSMLQMAKASRATVIAEGIELPEELATLKDMGVNLVQGYLLARPQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHCCCC
ERPPRNTRAMPPRTETAVAPLNEEAADLSALLNPQPSVSQSTPTAEVLEAFRRQANLNSL
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCE
AVLDDDARPCGIVHRHSLSEALLKPFGTELFARKPISRLMSSDFLAAEVSQSLQQVSRLL
EEECCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
TSRARQRIEEDFIITSNGAYLGLGRVIDVLKLITEMKIQQARYANPLTLLPGNVPIQQCL
HHHHHHHHHHCEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCHHHHH
TRLLQQGRASMICYVDIDSFKPFNDIYGYARGDEVLLCLAQCLNDRIDPARDFVGHIGGD
HHHHHCCCCCEEEEEECCCCCCHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCC
DFLMVLGFDDWERRLKTLLDDFQNQCRRFYRAEHLEAGCFIALNRQGQRQEFPLLSLSIG
CEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEEC
VVHLHEASCTLVDASQLADLASQAKHFAKDVAGASIHVIDSTRLDLLMQA
EEEEECCCEEEECHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHCCC
>Mature Secondary Structure 
TITEQLSALSSILARGDLHSLFQPIVSLSEHRILGYEALTRGPSNSALHSPLNLFAIAR
CHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEECHHHHCCCCCCCHHHCHHHHHHHHH
QAGRLSELELSCRDSACRRFSQQKLPGKLFLNVSPESLLETSHPPGRTLEMLRRYHIAPK
HHCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHCCCCCCHHHHHHHHHCCCCH
DVVIELTEQMPTDDFDLLYKALHHYRDMGFSIALDDLGAGYSSLRLWSELRPDYVKIDRH
HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEHHHCCCHHHHHHHHHCCCCHHHHHHH
FIDGIHQDAVKREFVGSMLQMAKASRATVIAEGIELPEELATLKDMGVNLVQGYLLARPQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHCCCC
ERPPRNTRAMPPRTETAVAPLNEEAADLSALLNPQPSVSQSTPTAEVLEAFRRQANLNSL
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCE
AVLDDDARPCGIVHRHSLSEALLKPFGTELFARKPISRLMSSDFLAAEVSQSLQQVSRLL
EEECCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
TSRARQRIEEDFIITSNGAYLGLGRVIDVLKLITEMKIQQARYANPLTLLPGNVPIQQCL
HHHHHHHHHHCEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCHHHHH
TRLLQQGRASMICYVDIDSFKPFNDIYGYARGDEVLLCLAQCLNDRIDPARDFVGHIGGD
HHHHHCCCCCEEEEEECCCCCCHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCC
DFLMVLGFDDWERRLKTLLDDFQNQCRRFYRAEHLEAGCFIALNRQGQRQEFPLLSLSIG
CEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEEC
VVHLHEASCTLVDASQLADLASQAKHFAKDVAGASIHVIDSTRLDLLMQA
EEEEECCCEEEECHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503; 2201776 [H]