Click here to switch to the map view.

The map label for this gene is 66044841

Identifier: 66044841

GI number: 66044841

Start: 1795014

End: 1795352

Strand: Direct

Name: 66044841

Synonym: Psyr_1596

Alternate gene names: NA

Gene position: 1795014-1795352 (Clockwise)

Preceding gene: 66044840

Following gene: 66044842

Centisome position: 29.46

GC content: 65.19

Gene sequence:

>339_bases
ATGGATCTTCAAGTGATATCCCGTGACGGGGAGCCGGAATACGCCGTGCTGCCCTGGGCGCAGTATCAAGCACTGCTCAA
GGCCGCCGGCCTGGCCGGCAAGCCTTCCGAGCCGGCTGCCTCGACTGGCGGCACCACCGCCAGTGAGCTTCCCGGGTTCG
ATGAATTGCGTGCACTGCGCGAGGCCAAAGGCCTTGAAGCGGCAAGTCTGGCGCGTACCGTCGGGATCAGCCCGTCCTAT
CTGGAACTGATCGAGAACGGTACTCGGCAGCCGGACGGCGCCATCAAACGCAGCCTGGCGTGGGAGCTTGGAGTGCCGGG
CTGGCGAGGTGAGTCGTGA

Upstream 100 bases:

>100_bases
GTCTCACGGATTGAACACAAGCCCTGGCGTTCCGCTGTTAAGATGCCTGCCTATGGATCAAGCCTGATCAGTATGCGGTC
GTGTAGTACAAGGTGACTCT

Downstream 100 bases:

>100_bases
GCGTGCGCATCAGTCGTCAGCATTGGGATGGACTGCTCAATGAGCTCGATCTGGCACGTCGCCAACGGCACCTGCTGACC
TATCGCGCTCTGGTGGAACG

Product: helix-hairpin-helix DNA-binding motif-containing protein

Products: NA

Alternate protein names: Cro/CI Family Transcriptional Regulator; Transcriptional Regulator

Number of amino acids: Translated: 112; Mature: 112

Protein sequence:

>112_residues
MDLQVISRDGEPEYAVLPWAQYQALLKAAGLAGKPSEPAASTGGTTASELPGFDELRALREAKGLEAASLARTVGISPSY
LELIENGTRQPDGAIKRSLAWELGVPGWRGES

Sequences:

>Translated_112_residues
MDLQVISRDGEPEYAVLPWAQYQALLKAAGLAGKPSEPAASTGGTTASELPGFDELRALREAKGLEAASLARTVGISPSY
LELIENGTRQPDGAIKRSLAWELGVPGWRGES
>Mature_112_residues
MDLQVISRDGEPEYAVLPWAQYQALLKAAGLAGKPSEPAASTGGTTASELPGFDELRALREAKGLEAASLARTVGISPSY
LELIENGTRQPDGAIKRSLAWELGVPGWRGES

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11836; Mature: 11836

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLQVISRDGEPEYAVLPWAQYQALLKAAGLAGKPSEPAASTGGTTASELPGFDELRALR
CCCEEECCCCCCCEEEECHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHH
EAKGLEAASLARTVGISPSYLELIENGTRQPDGAIKRSLAWELGVPGWRGES
HHCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MDLQVISRDGEPEYAVLPWAQYQALLKAAGLAGKPSEPAASTGGTTASELPGFDELRALR
CCCEEECCCCCCCEEEECHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHH
EAKGLEAASLARTVGISPSYLELIENGTRQPDGAIKRSLAWELGVPGWRGES
HHCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA