| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66044804
Identifier: 66044804
GI number: 66044804
Start: 1754198
End: 1755166
Strand: Reverse
Name: 66044804
Synonym: Psyr_1559
Alternate gene names: NA
Gene position: 1755166-1754198 (Counterclockwise)
Preceding gene: 66044811
Following gene: 66044802
Centisome position: 28.8
GC content: 60.47
Gene sequence:
>969_bases ATGACTCAGAACAATCAATCGCTCAGCCTGGAGAACCATACGGCGTTCAGCGGTACATTCCAGCCTGATCAGTTGACCAT CGGATTCATCTCGCCCGCGCGCGGCTATCCTGACGGCCCTTTTCCCAGTCTGGAGGACCAGGCCGAGATCGTGCAGCGCC TCGATCAGAGCGATGCTGCGGCGCTGTGGCTGCGCGATGTGCCGTTTTACGATCCGTCATTTGGCGATACCGGCCAGGTC CTTGATCCGCTGGTGTACGCGGGCTGGCTGGCAGCGCTCACTCATAGAATCGCCATCGGCACTGCAGGCATCGTCAGCCC GTTGCGAGAGCCGGTTATCACCGCCAAGCAGATCGCTACGGCGGACCAACTCCTGGGAGGCCGCTTTCTCGCTGGCATGG CTTCGGGTGACCGGGCAACAGAGTACCCGGCTTTCGGGGTCGACTTTGCCAGCCGGGCGGAACGCTATCAGGAAGCGCTA ACGCTGATCAAAACGCTGATTTCAGAGTCATTTCCGCGCCTGAAGACACAGCATTTCGGCCAGTTGCGGGGCGATATCGA TCTGGTACCCAAACCCGCAGCCCAACGCGTCCCTATCATTGCCATCGGTCGTGCTGGACAGAGCCTGGAGTGGCTTGCAG CCAATGTAGATGCCTGGATCTGGCATGGCGACGCGCTGCGCATGCCGGAGGCTGTACCCCATTGGCGTGAGGCAACCGCT TCCAGGGGATTCGTCCCTTTCGGCTATGGCGCGATGTTCGATCTCGACACCAATCCTGACGCGCCGCTACAAACGGGGCG GATGCTGCGGGGCGGTCGAAAGGCGCTGAAAGACTTCTTCTCGCGGCAACGCGAAGCCGGGATCAATCATGTTGCATTGA ACCTCAAGCCCACGCGGCGCCCCTCTCTGGAGCTGATCGATGAACTTCAGGAGCACATCCTCCCCGAGTTTTCGATCACG TCAGGCTGA
Upstream 100 bases:
>100_bases TTGATGATTTTTTTTCACAATGACTGATCCAAAAGATCGGAGATCCGCCTAAAGGTCATCTATAGAATCGAATGATCGAT TTCCGAAACGGAGTAAAACG
Downstream 100 bases:
>100_bases GGAGACAGGGACGGCTTCGCGCTTCTGTGTTGTCAGCGGCTTTGCGATCATCCCCGATTCAATGATTATTCAAGCCCGCT CAACTCGCCCGGCAGGCGTG
Product: luciferase
Products: NA
Alternate protein names: Luciferase-Like Monooxygenase; Monooxygenase; Luciferase; Luciferase-Type Oxidoreductase; Bacterial Luciferase Family Protein; Luciferase-Like Subgroup; Luciferase-Like Monooxygenase Superfamily; Luciferase-Like Protein; Flavin-Dependent Oxidoreductase; Alkanal Monooxygenase; Oxidoreductase; Luciferase Monooxygenase; Dehydrogenase; Hybride Transferase/; Favin-Dependent Monooxygenase; Luciferase Protein; Luciferase-Like; Luciferase-Like Monooxygenase Family; Flavin-Dependent Dehydrogenase; Luciferase-Like Monooxygenase Family Protein
Number of amino acids: Translated: 322; Mature: 321
Protein sequence:
>322_residues MTQNNQSLSLENHTAFSGTFQPDQLTIGFISPARGYPDGPFPSLEDQAEIVQRLDQSDAAALWLRDVPFYDPSFGDTGQV LDPLVYAGWLAALTHRIAIGTAGIVSPLREPVITAKQIATADQLLGGRFLAGMASGDRATEYPAFGVDFASRAERYQEAL TLIKTLISESFPRLKTQHFGQLRGDIDLVPKPAAQRVPIIAIGRAGQSLEWLAANVDAWIWHGDALRMPEAVPHWREATA SRGFVPFGYGAMFDLDTNPDAPLQTGRMLRGGRKALKDFFSRQREAGINHVALNLKPTRRPSLELIDELQEHILPEFSIT SG
Sequences:
>Translated_322_residues MTQNNQSLSLENHTAFSGTFQPDQLTIGFISPARGYPDGPFPSLEDQAEIVQRLDQSDAAALWLRDVPFYDPSFGDTGQV LDPLVYAGWLAALTHRIAIGTAGIVSPLREPVITAKQIATADQLLGGRFLAGMASGDRATEYPAFGVDFASRAERYQEAL TLIKTLISESFPRLKTQHFGQLRGDIDLVPKPAAQRVPIIAIGRAGQSLEWLAANVDAWIWHGDALRMPEAVPHWREATA SRGFVPFGYGAMFDLDTNPDAPLQTGRMLRGGRKALKDFFSRQREAGINHVALNLKPTRRPSLELIDELQEHILPEFSIT SG >Mature_321_residues TQNNQSLSLENHTAFSGTFQPDQLTIGFISPARGYPDGPFPSLEDQAEIVQRLDQSDAAALWLRDVPFYDPSFGDTGQVL DPLVYAGWLAALTHRIAIGTAGIVSPLREPVITAKQIATADQLLGGRFLAGMASGDRATEYPAFGVDFASRAERYQEALT LIKTLISESFPRLKTQHFGQLRGDIDLVPKPAAQRVPIIAIGRAGQSLEWLAANVDAWIWHGDALRMPEAVPHWREATAS RGFVPFGYGAMFDLDTNPDAPLQTGRMLRGGRKALKDFFSRQREAGINHVALNLKPTRRPSLELIDELQEHILPEFSITS G
Specific function: Unknown
COG id: COG2141
COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35387; Mature: 35256
Theoretical pI: Translated: 5.63; Mature: 5.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQNNQSLSLENHTAFSGTFQPDQLTIGFISPARGYPDGPFPSLEDQAEIVQRLDQSDAA CCCCCCCEEECCCCEECCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCHH ALWLRDVPFYDPSFGDTGQVLDPLVYAGWLAALTHRIAIGTAGIVSPLREPVITAKQIAT EEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH ADQLLGGRFLAGMASGDRATEYPAFGVDFASRAERYQEALTLIKTLISESFPRLKTQHFG HHHHHCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH QLRGDIDLVPKPAAQRVPIIAIGRAGQSLEWLAANVDAWIWHGDALRMPEAVPHWREATA HHCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHH SRGFVPFGYGAMFDLDTNPDAPLQTGRMLRGGRKALKDFFSRQREAGINHVALNLKPTRR CCCCCEECCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCC PSLELIDELQEHILPEFSITSG CCHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure TQNNQSLSLENHTAFSGTFQPDQLTIGFISPARGYPDGPFPSLEDQAEIVQRLDQSDAA CCCCCCEEECCCCEECCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCHH ALWLRDVPFYDPSFGDTGQVLDPLVYAGWLAALTHRIAIGTAGIVSPLREPVITAKQIAT EEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH ADQLLGGRFLAGMASGDRATEYPAFGVDFASRAERYQEALTLIKTLISESFPRLKTQHFG HHHHHCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH QLRGDIDLVPKPAAQRVPIIAIGRAGQSLEWLAANVDAWIWHGDALRMPEAVPHWREATA HHCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHH SRGFVPFGYGAMFDLDTNPDAPLQTGRMLRGGRKALKDFFSRQREAGINHVALNLKPTRR CCCCCEECCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCC PSLELIDELQEHILPEFSITSG CCHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA