| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66044799
Identifier: 66044799
GI number: 66044799
Start: 1746859
End: 1747890
Strand: Reverse
Name: 66044799
Synonym: Psyr_1554
Alternate gene names: NA
Gene position: 1747890-1746859 (Counterclockwise)
Preceding gene: 66044800
Following gene: 66044793
Centisome position: 28.68
GC content: 43.8
Gene sequence:
>1032_bases ATGGGCGATGAATCGGGAGTGGAAAAAAAAACCAGAGGAGTAGATCATGCCGAGCCAGGTGCTCGGAAGTCAGTTTGCTC AAGAGAGCAACCGATGATCACCCACAAACGTGCAGGAGGCACTTTGAAAAGCTCTATTATCGTCCCAATTCTGATCATGT TTTTTCTGACGCTGGCCATTACAGGCTTTGCGAATCACACGCATCAACGCAAACCTTTTTTTACTCGCATACCCCGCTGG ACATTTAACTACAAGCCTTTGGGGTGGACTCTTATGGATTATTTAGCCGCTACGACCTCAGTATCTATATTGGGCTTGAT TTATCTTCTTTTATTTGAAGCCATTCAGATTAAAGTACCCAAATTTTTAGCCTTGGTAGTAATTGGGTGTATTTGCACAT GCACTGTTGGCATGGCGACGCTGTATTTTAACCTTGTAGACACCTACAAAAAGATCTCCACTCCGCTGACCATCATTTCA ACGACAGCAACTATTTTCATAGCAGTGATCAGCAGCATTCTGGCAGATGGACACATTGAACGTCTTACAGGGGTGGAGGC GGGGAAGTTTCCTAATGCACAAAAAGCCATGATTCTAACTTCCACGGTAATAATTTGGGCCTCGATAATTTTCGTGGCTA GCGCGCTATTTACGACTGCGAGCTCTATATACTTATTCTGGAAAACAGGGCCGGGGAGTTCTATTAATTTAAACCAGGCA GATGACAAAGGACGAACGCCATTTCATGCATTTAACTTATTAATCGGAATAACTTTTTTCTTCGGGATATTAAGCGGAGC TTATAGTACAGCAATAAATGACCTATCGGAGCGAAGATTGAAATACTGGCTTGTAGGAAGCTCATTTCATTTCGCCCCGG AGCATTGCGGAATAAGAGAAAAGCCAATGGACTCACAGATTGCACTTATCGGTGATGGAAAAGCTGTCTTAGCCACGTCA TCTCTCACTGAAATTTACCGCTTTGACTTGATTGCCTGTCCACAGGCATCCGAACCTAAGCCGACATACTAA
Upstream 100 bases:
>100_bases TACCGGGATGAAAAGGCTGGGAAGGAAAGCCTGTCACGGCCGGAGATCAGAGTAAGCCTAGGCGGTTGGTGCATCTGTAC AGTAGGAAAGGGCGCGCTAA
Downstream 100 bases:
>100_bases AATCAGATTTTATAAGCCACTAAGTACTTAATAAACTCTCCGACAAGTGCCTATCAGGCACTTGTCGCCCCCCCTACTAC TTACGAATCACGGTCAGACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 343; Mature: 342
Protein sequence:
>343_residues MGDESGVEKKTRGVDHAEPGARKSVCSREQPMITHKRAGGTLKSSIIVPILIMFFLTLAITGFANHTHQRKPFFTRIPRW TFNYKPLGWTLMDYLAATTSVSILGLIYLLLFEAIQIKVPKFLALVVIGCICTCTVGMATLYFNLVDTYKKISTPLTIIS TTATIFIAVISSILADGHIERLTGVEAGKFPNAQKAMILTSTVIIWASIIFVASALFTTASSIYLFWKTGPGSSINLNQA DDKGRTPFHAFNLLIGITFFFGILSGAYSTAINDLSERRLKYWLVGSSFHFAPEHCGIREKPMDSQIALIGDGKAVLATS SLTEIYRFDLIACPQASEPKPTY
Sequences:
>Translated_343_residues MGDESGVEKKTRGVDHAEPGARKSVCSREQPMITHKRAGGTLKSSIIVPILIMFFLTLAITGFANHTHQRKPFFTRIPRW TFNYKPLGWTLMDYLAATTSVSILGLIYLLLFEAIQIKVPKFLALVVIGCICTCTVGMATLYFNLVDTYKKISTPLTIIS TTATIFIAVISSILADGHIERLTGVEAGKFPNAQKAMILTSTVIIWASIIFVASALFTTASSIYLFWKTGPGSSINLNQA DDKGRTPFHAFNLLIGITFFFGILSGAYSTAINDLSERRLKYWLVGSSFHFAPEHCGIREKPMDSQIALIGDGKAVLATS SLTEIYRFDLIACPQASEPKPTY >Mature_342_residues GDESGVEKKTRGVDHAEPGARKSVCSREQPMITHKRAGGTLKSSIIVPILIMFFLTLAITGFANHTHQRKPFFTRIPRWT FNYKPLGWTLMDYLAATTSVSILGLIYLLLFEAIQIKVPKFLALVVIGCICTCTVGMATLYFNLVDTYKKISTPLTIIST TATIFIAVISSILADGHIERLTGVEAGKFPNAQKAMILTSTVIIWASIIFVASALFTTASSIYLFWKTGPGSSINLNQAD DKGRTPFHAFNLLIGITFFFGILSGAYSTAINDLSERRLKYWLVGSSFHFAPEHCGIREKPMDSQIALIGDGKAVLATSS LTEIYRFDLIACPQASEPKPTY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37694; Mature: 37562
Theoretical pI: Translated: 9.46; Mature: 9.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGDESGVEKKTRGVDHAEPGARKSVCSREQPMITHKRAGGTLKSSIIVPILIMFFLTLAI CCCCCCCCHHHCCCCCCCCCHHHHHHCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHH TGFANHTHQRKPFFTRIPRWTFNYKPLGWTLMDYLAATTSVSILGLIYLLLFEAIQIKVP HHHHCCCCCCCCHHHHCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KFLALVVIGCICTCTVGMATLYFNLVDTYKKISTPLTIISTTATIFIAVISSILADGHIE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHH RLTGVEAGKFPNAQKAMILTSTVIIWASIIFVASALFTTASSIYLFWKTGPGSSINLNQA HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCEEECCCC DDKGRTPFHAFNLLIGITFFFGILSGAYSTAINDLSERRLKYWLVGSSFHFAPEHCGIRE CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCHHHCCCCC KPMDSQIALIGDGKAVLATSSLTEIYRFDLIACPQASEPKPTY CCCCCCEEEEECCCEEEEHHHHHHHHHHHHEECCCCCCCCCCC >Mature Secondary Structure GDESGVEKKTRGVDHAEPGARKSVCSREQPMITHKRAGGTLKSSIIVPILIMFFLTLAI CCCCCCCHHHCCCCCCCCCHHHHHHCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHH TGFANHTHQRKPFFTRIPRWTFNYKPLGWTLMDYLAATTSVSILGLIYLLLFEAIQIKVP HHHHCCCCCCCCHHHHCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KFLALVVIGCICTCTVGMATLYFNLVDTYKKISTPLTIISTTATIFIAVISSILADGHIE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHH RLTGVEAGKFPNAQKAMILTSTVIIWASIIFVASALFTTASSIYLFWKTGPGSSINLNQA HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCEEECCCC DDKGRTPFHAFNLLIGITFFFGILSGAYSTAINDLSERRLKYWLVGSSFHFAPEHCGIRE CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCHHHCCCCC KPMDSQIALIGDGKAVLATSSLTEIYRFDLIACPQASEPKPTY CCCCCCEEEEECCCEEEEHHHHHHHHHHHHEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA