| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66044708
Identifier: 66044708
GI number: 66044708
Start: 1647703
End: 1649067
Strand: Direct
Name: 66044708
Synonym: Psyr_1461
Alternate gene names: NA
Gene position: 1647703-1649067 (Clockwise)
Preceding gene: 66044707
Following gene: 66044709
Centisome position: 27.04
GC content: 40.07
Gene sequence:
>1365_bases GTGTATGGCTTGAATATGATTAACTTTTATTTGTCTCGAGCAAGATTTGCAAATGAGAGGCTAGATTTTATCAGCCACAT GAAAGTCTCCTCGCCGTTACTGTTCGCAAACTTGATTTCTAGCACTCAAGCATTTGTGCTACTTGCAATATCCATATCAC TACTTTCACACCAAGCAATTATTTTTACTTATGCTGCAAGCATCGGGTTATTTTACACCTCGATGGTACTAGCGGTCACT AATCCTGTAGGATACCGAGTAAGCTCGCATGTCGCTAAAAAAGACCATAGAGCTGCATTGATAACAATTGCGCGAGCTTA CCCTTACTTGTTAATACTTATAGGTATTCTATGGCTTGCATTGGTGTATTGTCACGCATACACTATAAAGCCCATATCGG CTAGTGTTGATTTGGCTGTTTCAGCACAGTACATGAAGATTTACTGGGCTGACTCTGCTATCCTTACACTTTCTGTACCA CTATACTTACTAGCACTTGCGCTCAAGAAAAATTTACTGATTTTGATGATTGCTATCTTTGGTGCGGTGGTAACATTAGT ATATGCCTTTTACCAGGTATTCATCTTGCACGCACAGATACCCAGCCTGGCTGCTGCATCGCTTTATGGGAGAATCGTAA TGGCTTTGGCTTACGCCATTATTTTTCTTACATATCTGAAAAGTGTTTGGCATGACCTAACGGTCGACGCAAATAGAAGT GATGAGAAAAGCAAAAACTTATTTTCGGACATAGTTGATTATGTTTCTGCTTCTCTCGCTAGTAATGGCTTGAGCCTTAC TCAAGCTCTGGTGCTCTCTTTGACGCCTACGATACTTATTGTTAACGCAGCAGTTAGTAGCGTGTCCAATATTTTCAACT CGCTGGGACTTGCTTTGGGAACATCCGGCGGCATAGCTTTGGCGAGAGCAAATGCAATCGGCGAACCGTATTGTCTAGAA GTTTCAGAAGCGATAAAGATATATGCAAAAATATTTACTATAATTGTTTTTCTTTGTGGCCTTGTCATCTTAATTGTTCA ACTTGGCCTGACAAAGTATTTTGATGGTCTTAAGTTGATTTATATAAGCGTTGTAACTTCGCTTATCGTATGTACGGCTT TTTTTACTAGCTACACTTCCAAAGCTATTTTAAGGGGGGACGCTCGCTTTCAAAAGAACCTGACTTTTCGATTTGTTAAA TTCAGAGCCGTGGCGCTCGTTTTTTTCTATGCACTAACGCTCAGCGACATGCTTACTGAAGTTGTTTATTTCAGTTTGAT GCTGCTTATGGCATTCTACTATGCACTAGCTATTTCAAAACGTATTGACAGTGGCTTGTGGGTGGAAAAATTCAAAAGGA TATAA
Upstream 100 bases:
>100_bases GAAGAGCAAGAGCATGTTTTAGAAGCCGGCTCGTACTTTTTTATGGGTAAGGGCACCATTCACAAGGCTCAATGCTTCGA TGAGCCATCTATTCATGTAA
Downstream 100 bases:
>100_bases AAATGAATATATTACGGCCTACGCTAACTACACCTAGATTGAAGATTCGAGCGTTCCGTCCAGAAGATTTTGAATCGTTT TACACTGCGATCAATGAACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 454; Mature: 454
Protein sequence:
>454_residues MYGLNMINFYLSRARFANERLDFISHMKVSSPLLFANLISSTQAFVLLAISISLLSHQAIIFTYAASIGLFYTSMVLAVT NPVGYRVSSHVAKKDHRAALITIARAYPYLLILIGILWLALVYCHAYTIKPISASVDLAVSAQYMKIYWADSAILTLSVP LYLLALALKKNLLILMIAIFGAVVTLVYAFYQVFILHAQIPSLAAASLYGRIVMALAYAIIFLTYLKSVWHDLTVDANRS DEKSKNLFSDIVDYVSASLASNGLSLTQALVLSLTPTILIVNAAVSSVSNIFNSLGLALGTSGGIALARANAIGEPYCLE VSEAIKIYAKIFTIIVFLCGLVILIVQLGLTKYFDGLKLIYISVVTSLIVCTAFFTSYTSKAILRGDARFQKNLTFRFVK FRAVALVFFYALTLSDMLTEVVYFSLMLLMAFYYALAISKRIDSGLWVEKFKRI
Sequences:
>Translated_454_residues MYGLNMINFYLSRARFANERLDFISHMKVSSPLLFANLISSTQAFVLLAISISLLSHQAIIFTYAASIGLFYTSMVLAVT NPVGYRVSSHVAKKDHRAALITIARAYPYLLILIGILWLALVYCHAYTIKPISASVDLAVSAQYMKIYWADSAILTLSVP LYLLALALKKNLLILMIAIFGAVVTLVYAFYQVFILHAQIPSLAAASLYGRIVMALAYAIIFLTYLKSVWHDLTVDANRS DEKSKNLFSDIVDYVSASLASNGLSLTQALVLSLTPTILIVNAAVSSVSNIFNSLGLALGTSGGIALARANAIGEPYCLE VSEAIKIYAKIFTIIVFLCGLVILIVQLGLTKYFDGLKLIYISVVTSLIVCTAFFTSYTSKAILRGDARFQKNLTFRFVK FRAVALVFFYALTLSDMLTEVVYFSLMLLMAFYYALAISKRIDSGLWVEKFKRI >Mature_454_residues MYGLNMINFYLSRARFANERLDFISHMKVSSPLLFANLISSTQAFVLLAISISLLSHQAIIFTYAASIGLFYTSMVLAVT NPVGYRVSSHVAKKDHRAALITIARAYPYLLILIGILWLALVYCHAYTIKPISASVDLAVSAQYMKIYWADSAILTLSVP LYLLALALKKNLLILMIAIFGAVVTLVYAFYQVFILHAQIPSLAAASLYGRIVMALAYAIIFLTYLKSVWHDLTVDANRS DEKSKNLFSDIVDYVSASLASNGLSLTQALVLSLTPTILIVNAAVSSVSNIFNSLGLALGTSGGIALARANAIGEPYCLE VSEAIKIYAKIFTIIVFLCGLVILIVQLGLTKYFDGLKLIYISVVTSLIVCTAFFTSYTSKAILRGDARFQKNLTFRFVK FRAVALVFFYALTLSDMLTEVVYFSLMLLMAFYYALAISKRIDSGLWVEKFKRI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50163; Mature: 50163
Theoretical pI: Translated: 9.77; Mature: 9.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYGLNMINFYLSRARFANERLDFISHMKVSSPLLFANLISSTQAFVLLAISISLLSHQAI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IFTYAASIGLFYTSMVLAVTNPVGYRVSSHVAKKDHRAALITIARAYPYLLILIGILWLA HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH LVYCHAYTIKPISASVDLAVSAQYMKIYWADSAILTLSVPLYLLALALKKNLLILMIAIF HHHHHHHHCCCCCCCCCCEEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH GAVVTLVYAFYQVFILHAQIPSLAAASLYGRIVMALAYAIIFLTYLKSVWHDLTVDANRS HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC DEKSKNLFSDIVDYVSASLASNGLSLTQALVLSLTPTILIVNAAVSSVSNIFNSLGLALG CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHC TSGGIALARANAIGEPYCLEVSEAIKIYAKIFTIIVFLCGLVILIVQLGLTKYFDGLKLI CCCCEEEEECCCCCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH YISVVTSLIVCTAFFTSYTSKAILRGDARFQKNLTFRFVKFRAVALVFFYALTLSDMLTE HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH VVYFSLMLLMAFYYALAISKRIDSGLWVEKFKRI HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCC >Mature Secondary Structure MYGLNMINFYLSRARFANERLDFISHMKVSSPLLFANLISSTQAFVLLAISISLLSHQAI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IFTYAASIGLFYTSMVLAVTNPVGYRVSSHVAKKDHRAALITIARAYPYLLILIGILWLA HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH LVYCHAYTIKPISASVDLAVSAQYMKIYWADSAILTLSVPLYLLALALKKNLLILMIAIF HHHHHHHHCCCCCCCCCCEEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH GAVVTLVYAFYQVFILHAQIPSLAAASLYGRIVMALAYAIIFLTYLKSVWHDLTVDANRS HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC DEKSKNLFSDIVDYVSASLASNGLSLTQALVLSLTPTILIVNAAVSSVSNIFNSLGLALG CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHC TSGGIALARANAIGEPYCLEVSEAIKIYAKIFTIIVFLCGLVILIVQLGLTKYFDGLKLI CCCCEEEEECCCCCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH YISVVTSLIVCTAFFTSYTSKAILRGDARFQKNLTFRFVKFRAVALVFFYALTLSDMLTE HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH VVYFSLMLLMAFYYALAISKRIDSGLWVEKFKRI HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA