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The map label for this gene is 66044699

Identifier: 66044699

GI number: 66044699

Start: 1638691

End: 1640154

Strand: Reverse

Name: 66044699

Synonym: Psyr_1452

Alternate gene names: NA

Gene position: 1640154-1638691 (Counterclockwise)

Preceding gene: 66044700

Following gene: 66044698

Centisome position: 26.92

GC content: 54.71

Gene sequence:

>1464_bases
ATGCAATGGACAGAAGAACAACTGCCAGCTATTCACTCCTTCGCAAAGAAGCTACTGGTCCAGGCGTTTGCCGGTACCGG
GAAGACAACGACACTCGTCGGTTACGCCACGCATAACTCGTCGGTCAAAATGCTGTACCTCTGCTACAACAAAGCCGTTG
AGATCGCGGCAAAGAACCGTTTTCCACGCAATGTGACCTGCAAAACAGCTCACGGCCTCGCCTACGCTGTCTATGGCAGC
CAGTACAAACACAAGCAGGCTGGCAATCTGCGTTTGACCGACATCGCGAGGACGATCAATACCCAGGATTGGGAGCTGGC
CAAAGATATCGTTTCTACCCTCAATGCCTTCATGGCCAGCAAGGATCTGGAGCTGCTGGAAGACCACTTTGTGCGATTCC
AGAGCAACCGCACACTGACCTCGGTCCAGGAGCAGTACATGAGTAAAGCGCTCAACCTGACCAGAGACGTTTGGCAGAAG
ATGGTCGATATCAACGATCGCTCAGTCCCCATGACGCACGATGGCTATCTGAAGCTGTATCAGATGAGCCAGCCAGATCT
GAGCCAGCGTTTCGGTGCGATTTTGCTCGACGAAGGGCAGGACGTGAACCCGGTCATCGCGAATCTGGTCCAGATCCAAA
CAATAACTCAAGTCACTGTAGGTGATCGGCATCAGCAGCTGTATCGGTTCAGAGGCGCTGTGGATGCTTTAAACAGCCCG
GCGATGAAGGACGCCGAGAAGCACTTCCTGACTCAGAGCTTCAGATTTGGACCGGCTGTTGCCTACGTGGCCAACGTCAT
CCTTTCCTTCAAGGGTGAAAAGATCCCCCTGCAAGGCCTGGGACAGCCGACGTTGGTGAAACGAGCCTTACCGGACGATC
TCCCTCACCGCACCTACCTGCACCGTACTGTGAGCGGTGTGATCGAGAACGCGCTGCGCCTGGTCAACCAAAACCACCGC
ATGCAGTGGATCGGAGGGATCGACAGCTATTCCTTGCGCGATCTGGAGGACCTGTTCTATTTCAGCCGGCATATGAATGA
CCAGGTCCAGCAGCGCAAATTGCTGACCGACTATGCCGATTACGACCAGTATGTCGTGATCGCGAAGGCCACGCAGGATC
CTGAGATGCTGCGCTCGATCAAAATCATCGAAAACTATGCGGATCTGCCCCAACGAATCGAGCAACTGCGTGCTGCATCT
GTCACGTCGGAGCTCGATGCAACCGTGACCCTTACCACTGCGCACAGAGCCAAAGGTCTGGAGTGGGACTTCGTTGGGCT
TTATGACGACTTTTCTGCAGATCCGCTCTCTCCTGACATCGACGCCGGCAAACGCGACGATGAGCTGAACCTTCTATACG
TAGCTGTCACACGAGCCATGAAGATTCTGGCCGTCAACTCGCTGGTGATCGACATCATGCAGCGCTTCAAAGACAACCGA
TCCGTCATCGCGGCCACTGCGTGA

Upstream 100 bases:

>100_bases
CGTGAGCCCTTTGCTAGTGCTCCTGCCATGCGCGGCACTGCTCGGCCTGGCGGTCAGCATTACGGCGTCCAGCTTCAAAA
AATACCTTTAGGTGCCCTCC

Downstream 100 bases:

>100_bases
GGCTGACCCATGAGCACTTTTGAATACACCCAGACCTTCGTCCCACTCCCCTACAAAACCGTTACCAGCGGAGTGCTGAT
GTTCAAGTCGACGGACGACA

Product: hypothetical protein

Products: NA

Alternate protein names: Superfamily I DNA/RNA Helicase-Like Protein; Helicase; Superfamily I DNA/RNA Helicase; Helicase Superfamily Protein I; UvrD/REP Helicase; F-Box Only Protein; I DNA And RNA Helicase Protein; Superfamily I DNA And RNA Helicase; UvrD/Rep Family Helicase; I DNA And RNA Helicase; I DNA/RNA Helicase; Helicase Superfamily I

Number of amino acids: Translated: 487; Mature: 487

Protein sequence:

>487_residues
MQWTEEQLPAIHSFAKKLLVQAFAGTGKTTTLVGYATHNSSVKMLYLCYNKAVEIAAKNRFPRNVTCKTAHGLAYAVYGS
QYKHKQAGNLRLTDIARTINTQDWELAKDIVSTLNAFMASKDLELLEDHFVRFQSNRTLTSVQEQYMSKALNLTRDVWQK
MVDINDRSVPMTHDGYLKLYQMSQPDLSQRFGAILLDEGQDVNPVIANLVQIQTITQVTVGDRHQQLYRFRGAVDALNSP
AMKDAEKHFLTQSFRFGPAVAYVANVILSFKGEKIPLQGLGQPTLVKRALPDDLPHRTYLHRTVSGVIENALRLVNQNHR
MQWIGGIDSYSLRDLEDLFYFSRHMNDQVQQRKLLTDYADYDQYVVIAKATQDPEMLRSIKIIENYADLPQRIEQLRAAS
VTSELDATVTLTTAHRAKGLEWDFVGLYDDFSADPLSPDIDAGKRDDELNLLYVAVTRAMKILAVNSLVIDIMQRFKDNR
SVIAATA

Sequences:

>Translated_487_residues
MQWTEEQLPAIHSFAKKLLVQAFAGTGKTTTLVGYATHNSSVKMLYLCYNKAVEIAAKNRFPRNVTCKTAHGLAYAVYGS
QYKHKQAGNLRLTDIARTINTQDWELAKDIVSTLNAFMASKDLELLEDHFVRFQSNRTLTSVQEQYMSKALNLTRDVWQK
MVDINDRSVPMTHDGYLKLYQMSQPDLSQRFGAILLDEGQDVNPVIANLVQIQTITQVTVGDRHQQLYRFRGAVDALNSP
AMKDAEKHFLTQSFRFGPAVAYVANVILSFKGEKIPLQGLGQPTLVKRALPDDLPHRTYLHRTVSGVIENALRLVNQNHR
MQWIGGIDSYSLRDLEDLFYFSRHMNDQVQQRKLLTDYADYDQYVVIAKATQDPEMLRSIKIIENYADLPQRIEQLRAAS
VTSELDATVTLTTAHRAKGLEWDFVGLYDDFSADPLSPDIDAGKRDDELNLLYVAVTRAMKILAVNSLVIDIMQRFKDNR
SVIAATA
>Mature_487_residues
MQWTEEQLPAIHSFAKKLLVQAFAGTGKTTTLVGYATHNSSVKMLYLCYNKAVEIAAKNRFPRNVTCKTAHGLAYAVYGS
QYKHKQAGNLRLTDIARTINTQDWELAKDIVSTLNAFMASKDLELLEDHFVRFQSNRTLTSVQEQYMSKALNLTRDVWQK
MVDINDRSVPMTHDGYLKLYQMSQPDLSQRFGAILLDEGQDVNPVIANLVQIQTITQVTVGDRHQQLYRFRGAVDALNSP
AMKDAEKHFLTQSFRFGPAVAYVANVILSFKGEKIPLQGLGQPTLVKRALPDDLPHRTYLHRTVSGVIENALRLVNQNHR
MQWIGGIDSYSLRDLEDLFYFSRHMNDQVQQRKLLTDYADYDQYVVIAKATQDPEMLRSIKIIENYADLPQRIEQLRAAS
VTSELDATVTLTTAHRAKGLEWDFVGLYDDFSADPLSPDIDAGKRDDELNLLYVAVTRAMKILAVNSLVIDIMQRFKDNR
SVIAATA

Specific function: Unknown

COG id: COG0210

COG function: function code L; Superfamily I DNA and RNA helicases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI30795119, Length=494, Percent_Identity=35.4251012145749, Blast_Score=233, Evalue=2e-61,
Organism=Homo sapiens, GI30795117, Length=494, Percent_Identity=35.4251012145749, Blast_Score=233, Evalue=2e-61,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55213; Mature: 55213

Theoretical pI: Translated: 7.81; Mature: 7.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQWTEEQLPAIHSFAKKLLVQAFAGTGKTTTLVGYATHNSSVKMLYLCYNKAVEIAAKNR
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEEEEEHHHHHHHHHHCC
FPRNVTCKTAHGLAYAVYGSQYKHKQAGNLRLTDIARTINTQDWELAKDIVSTLNAFMAS
CCCCCEEECCCCEEEEEECCCCCCCCCCCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHC
KDLELLEDHFVRFQSNRTLTSVQEQYMSKALNLTRDVWQKMVDINDRSVPMTHDGYLKLY
CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEE
QMSQPDLSQRFGAILLDEGQDVNPVIANLVQIQTITQVTVGDRHQQLYRFRGAVDALNSP
ECCCCCHHHHCCEEEECCCCCCCHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHCCCC
AMKDAEKHFLTQSFRFGPAVAYVANVILSFKGEKIPLQGLGQPTLVKRALPDDLPHRTYL
CHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHH
HRTVSGVIENALRLVNQNHRMQWIGGIDSYSLRDLEDLFYFSRHMNDQVQQRKLLTDYAD
HHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCC
YDQYVVIAKATQDPEMLRSIKIIENYADLPQRIEQLRAASVTSELDATVTLTTAHRAKGL
CCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHCCCC
EWDFVGLYDDFSADPLSPDIDAGKRDDELNLLYVAVTRAMKILAVNSLVIDIMQRFKDNR
CEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SVIAATA
CEEEEEC
>Mature Secondary Structure
MQWTEEQLPAIHSFAKKLLVQAFAGTGKTTTLVGYATHNSSVKMLYLCYNKAVEIAAKNR
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEEEEEHHHHHHHHHHCC
FPRNVTCKTAHGLAYAVYGSQYKHKQAGNLRLTDIARTINTQDWELAKDIVSTLNAFMAS
CCCCCEEECCCCEEEEEECCCCCCCCCCCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHC
KDLELLEDHFVRFQSNRTLTSVQEQYMSKALNLTRDVWQKMVDINDRSVPMTHDGYLKLY
CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEE
QMSQPDLSQRFGAILLDEGQDVNPVIANLVQIQTITQVTVGDRHQQLYRFRGAVDALNSP
ECCCCCHHHHCCEEEECCCCCCCHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHCCCC
AMKDAEKHFLTQSFRFGPAVAYVANVILSFKGEKIPLQGLGQPTLVKRALPDDLPHRTYL
CHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHH
HRTVSGVIENALRLVNQNHRMQWIGGIDSYSLRDLEDLFYFSRHMNDQVQQRKLLTDYAD
HHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCC
YDQYVVIAKATQDPEMLRSIKIIENYADLPQRIEQLRAASVTSELDATVTLTTAHRAKGL
CCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHCCCC
EWDFVGLYDDFSADPLSPDIDAGKRDDELNLLYVAVTRAMKILAVNSLVIDIMQRFKDNR
CEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SVIAATA
CEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA