| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66044684
Identifier: 66044684
GI number: 66044684
Start: 1624983
End: 1626230
Strand: Direct
Name: 66044684
Synonym: Psyr_1436
Alternate gene names: NA
Gene position: 1624983-1626230 (Clockwise)
Preceding gene: 66044680
Following gene: 66044685
Centisome position: 26.67
GC content: 54.41
Gene sequence:
>1248_bases ATGCCCGCCTGGCCACGAGACGAGGCTAGGCTCACTATTCGATATTGGCCCGCCTGTAGGCCAAGGAGACCTGTTTTGGC TTTCAAAAAATCAATTTTGTGGACGTCCGTGCCCTTGATAGTCGCTTTCAGTGGTCAGTATGCCCAAGCTGATGCGCTCA GCAATCTCCCAAAAGACCAGCCTCAAGGAAAGATTGAACAGGTTTTCGCATTTCACGACGCTATGCCAACGGGCGTCAGC ATCAGTGAAAGGGGACGCATTTTTGTCAACTTCCCCCGTTGGGGCGACAAAGTGCCGTTCACTGTCGGAGAATTACGCGA CGGCAAGGTGGTGCCTTATCCCGATGTTGCGCTGAACCAGCCAGACCCGCAGCATCCGGAAAAGGGTTTCATCAGCGTCC AGAGTATTGTTGCCGATGGCTTAGGACACCTATGGATCCTTGATACCGCTGCGCCCGAATTCTCCAAGCCGCTCGCGGGT GGCGCCAAGTTGGTGGCCGTTGATCTTCACACCAACAAGGTCGTCAAGACGTTGGTCTTTCCTGAAAATGTCGTGTTGCC CAGCACCTACGTCAACGACATGCGTTTTGACTTCAGTGCCGGTAAGGAAGGCGTCATTTACATCACCGACTCCTCTCTTA GTGGGCCGGGCGCAATCATTGTCATGGACATTGCCACGGGTAAAGCAGTACGGCGTTTGAGTGGCGCGGCATCGACATCA GCTGATCCAAACTTCGTGCCAAGGGTTGAAGGTCAACTGCTGAGAGTTCGCAATGCCGATGGAAGCAGCAAGCCATTTGC CGTTGCTTCTGACGGTATTGCTCTGTCGGCGGATCGCCAGACTCTGTACTTCTGCGCACTGTCCAGCCGCCACCTGTATT CGGTATCTACAAAGCTCTTGCGCGACCCGAACGTCACCGAGCAACAGCTCACCAATGCAGTTAAAGATTTGGGCGAAAAA GGGCCATCGGACGGGCTGGAGGCTGACAGCGAAGGTGCTGTCTACGCTGGCGACTATGAAGACAACAGTATTCGCAAGCG CCTGCCCGATGGCAGCTGGCAGACGGTCGTTCACGATCCACGCATACTGTGGCCGGACACACTCTCTGTGGGAACTGACG GTTACCTTTACTTCACTGCCAACCAACTCCATCGCCAGGCGGGATTTCATGGTGGCAAAGATTTACGAGAAAAACCCTAC AGTTTGATGCGAGTGAAGATCAACGCAACACCGGTGCAGACACGCTGA
Upstream 100 bases:
>100_bases GCACAAACAGTTTCAAGTCGCCCAGTCGCATCATTTTCTCTATTCGAGTGAAAGTGCTGGTGAATTTACCGGCTTTTTAC GTCGCAATATACCGGTCAGT
Downstream 100 bases:
>100_bases ACGGGGCCAGCCATGGATATTCAAGCGCTGAACCTGTTTGTCAGATCCATGGAAATGGGAAACATCACCGCTGCTGGGGC GGAGTTAGGGCTGGTGCCTT
Product: hypothetical protein
Products: NA
Alternate protein names: Gluconolactonase; Royal Jelly-Like Protein; Glyoxalase/Bleomycin Resistance Protein/Dioxygenase; Royal Jelly-Like Exported Protein; SMP-30/Gluconolactonase/LRE Family Protein; Yellow-Related Protein
Number of amino acids: Translated: 415; Mature: 414
Protein sequence:
>415_residues MPAWPRDEARLTIRYWPACRPRRPVLAFKKSILWTSVPLIVAFSGQYAQADALSNLPKDQPQGKIEQVFAFHDAMPTGVS ISERGRIFVNFPRWGDKVPFTVGELRDGKVVPYPDVALNQPDPQHPEKGFISVQSIVADGLGHLWILDTAAPEFSKPLAG GAKLVAVDLHTNKVVKTLVFPENVVLPSTYVNDMRFDFSAGKEGVIYITDSSLSGPGAIIVMDIATGKAVRRLSGAASTS ADPNFVPRVEGQLLRVRNADGSSKPFAVASDGIALSADRQTLYFCALSSRHLYSVSTKLLRDPNVTEQQLTNAVKDLGEK GPSDGLEADSEGAVYAGDYEDNSIRKRLPDGSWQTVVHDPRILWPDTLSVGTDGYLYFTANQLHRQAGFHGGKDLREKPY SLMRVKINATPVQTR
Sequences:
>Translated_415_residues MPAWPRDEARLTIRYWPACRPRRPVLAFKKSILWTSVPLIVAFSGQYAQADALSNLPKDQPQGKIEQVFAFHDAMPTGVS ISERGRIFVNFPRWGDKVPFTVGELRDGKVVPYPDVALNQPDPQHPEKGFISVQSIVADGLGHLWILDTAAPEFSKPLAG GAKLVAVDLHTNKVVKTLVFPENVVLPSTYVNDMRFDFSAGKEGVIYITDSSLSGPGAIIVMDIATGKAVRRLSGAASTS ADPNFVPRVEGQLLRVRNADGSSKPFAVASDGIALSADRQTLYFCALSSRHLYSVSTKLLRDPNVTEQQLTNAVKDLGEK GPSDGLEADSEGAVYAGDYEDNSIRKRLPDGSWQTVVHDPRILWPDTLSVGTDGYLYFTANQLHRQAGFHGGKDLREKPY SLMRVKINATPVQTR >Mature_414_residues PAWPRDEARLTIRYWPACRPRRPVLAFKKSILWTSVPLIVAFSGQYAQADALSNLPKDQPQGKIEQVFAFHDAMPTGVSI SERGRIFVNFPRWGDKVPFTVGELRDGKVVPYPDVALNQPDPQHPEKGFISVQSIVADGLGHLWILDTAAPEFSKPLAGG AKLVAVDLHTNKVVKTLVFPENVVLPSTYVNDMRFDFSAGKEGVIYITDSSLSGPGAIIVMDIATGKAVRRLSGAASTSA DPNFVPRVEGQLLRVRNADGSSKPFAVASDGIALSADRQTLYFCALSSRHLYSVSTKLLRDPNVTEQQLTNAVKDLGEKG PSDGLEADSEGAVYAGDYEDNSIRKRLPDGSWQTVVHDPRILWPDTLSVGTDGYLYFTANQLHRQAGFHGGKDLREKPYS LMRVKINATPVQTR
Specific function: Unknown
COG id: COG3386
COG function: function code G; Gluconolactonase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45484; Mature: 45353
Theoretical pI: Translated: 8.58; Mature: 8.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAWPRDEARLTIRYWPACRPRRPVLAFKKSILWTSVPLIVAFSGQYAQADALSNLPKDQ CCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHCCCCCC PQGKIEQVFAFHDAMPTGVSISERGRIFVNFPRWGDKVPFTVGELRDGKVVPYPDVALNQ CCCHHHHHHHHHCCCCCCCEECCCCEEEEECCCCCCCCCEEECCCCCCCCCCCCCCCCCC PDPQHPEKGFISVQSIVADGLGHLWILDTAAPEFSKPLAGGAKLVAVDLHTNKVVKTLVF CCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCEEEEEEECCCCEEEEEEC PENVVLPSTYVNDMRFDFSAGKEGVIYITDSSLSGPGAIIVMDIATGKAVRRLSGAASTS CCCEECCCHHHCCEEEEECCCCCCEEEEECCCCCCCCEEEEEEECCCHHHHHHCCCCCCC ADPNFVPRVEGQLLRVRNADGSSKPFAVASDGIALSADRQTLYFCALSSRHLYSVSTKLL CCCCCCCCCCCEEEEEECCCCCCCCEEEECCCEEEECCCCEEEEEEECCCEEEHHHHHHH RDPNVTEQQLTNAVKDLGEKGPSDGLEADSEGAVYAGDYEDNSIRKRLPDGSWQTVVHDP CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCHHHHHCCCCCCEEEEECC RILWPDTLSVGTDGYLYFTANQLHRQAGFHGGKDLREKPYSLMRVKINATPVQTR EEECCCCCCCCCCCEEEEEHHHHHHHHCCCCCCHHHHCCCEEEEEEEECCCCCCC >Mature Secondary Structure PAWPRDEARLTIRYWPACRPRRPVLAFKKSILWTSVPLIVAFSGQYAQADALSNLPKDQ CCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHCCCCCC PQGKIEQVFAFHDAMPTGVSISERGRIFVNFPRWGDKVPFTVGELRDGKVVPYPDVALNQ CCCHHHHHHHHHCCCCCCCEECCCCEEEEECCCCCCCCCEEECCCCCCCCCCCCCCCCCC PDPQHPEKGFISVQSIVADGLGHLWILDTAAPEFSKPLAGGAKLVAVDLHTNKVVKTLVF CCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCEEEEEEECCCCEEEEEEC PENVVLPSTYVNDMRFDFSAGKEGVIYITDSSLSGPGAIIVMDIATGKAVRRLSGAASTS CCCEECCCHHHCCEEEEECCCCCCEEEEECCCCCCCCEEEEEEECCCHHHHHHCCCCCCC ADPNFVPRVEGQLLRVRNADGSSKPFAVASDGIALSADRQTLYFCALSSRHLYSVSTKLL CCCCCCCCCCCEEEEEECCCCCCCCEEEECCCEEEECCCCEEEEEEECCCEEEHHHHHHH RDPNVTEQQLTNAVKDLGEKGPSDGLEADSEGAVYAGDYEDNSIRKRLPDGSWQTVVHDP CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCHHHHHCCCCCCEEEEECC RILWPDTLSVGTDGYLYFTANQLHRQAGFHGGKDLREKPYSLMRVKINATPVQTR EEECCCCCCCCCCCEEEEEHHHHHHHHCCCCCCHHHHCCCEEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA