Definition Pseudomonas syringae pv. syringae B728a, complete genome.
Accession NC_007005
Length 6,093,698

Click here to switch to the map view.

The map label for this gene is 66044677

Identifier: 66044677

GI number: 66044677

Start: 1618163

End: 1619101

Strand: Reverse

Name: 66044677

Synonym: Psyr_1429

Alternate gene names: NA

Gene position: 1619101-1618163 (Counterclockwise)

Preceding gene: 66044678

Following gene: 66044676

Centisome position: 26.57

GC content: 58.15

Gene sequence:

>939_bases
ATGAACCTGCGAAAGCCTCGAGCGTGGGCAGCCTTGGCCTTGTCGATCTCAACCTGGCCGGCAGCAGCAGGCACGGTGAC
ATCTGCCACCCTGGTCGCCTCAACCCTGTCGCCTGACTGCCTGGAGTACAAGGTGGTCGGAATCTGCTACTGGCTGCTCT
GCACCCCGTTTGGATGCAAGGTAAAGACGTCGACAAAGGTTCGTCACTTCGTTCCAGACGCCGTGGTCTCAAGCTACTCG
AATACCGGTGAAAACCCGTGGATTGAGGTCTCTTCATTGAGCTCATCAACTTCGTTCGCCCAGGATGGCGGTGACGGAAC
CACCAATCACAGCAACGAAGATAGCCTGGCTAAATTCAAAAACGCTGACGTCATAGGCCACCCCGGAGGAGCAACATTCA
GTAAGTTTGCCAGCGCCTCGGGCTATGCCTGCCAGGGTGCTGCCACGCCCTACATGCCCTACCTGCTGAGCACTTTGGAC
ACTGTCGCCTGGCGTTACGGCGTTCCAGAATCAGTGTATCCAGAAGCACTGATTCCCGGCCGTCGAGAGGTGGGTGGTCT
GACGTCGGGGGACATGTGGGGAAGCGTCTACCCTCGCAGTGGTTTTATCCATCAAGCCGACGATTACAAGGCGGCATCCG
TGATCGCGCAGCGTGCAGGTGACGTGGTCACTCGCAGCGGTCAGGTTCATGTCTATCAACCGCTTCTGGCACAGCCGCAA
CCAGGGTACTGGCCGGCAGGAGAATTGATCGAGACCGACGCCACCACCGGTAAGTGGCAAGAGCTCACGCCGACCCTCAG
TCAAAGCTGCGCGGTATTTCCAAACTCCCAGCCCCGTGTGCAGGCAACAGATGGTGGCTACGCCTGGGCGTTATGGCGCC
CGTATTCCTGCTGCAAGCGGGAAGGACAAACCTTTCTTGGCAGTACGGACTTTCAATGA

Upstream 100 bases:

>100_bases
TGTATGGGGAAACTAACGCTACGGCGGCTGAAAATCGCGTTGCCCAGTGGCGCGCCGCCGCCCAACATCAGAACGCATCT
GGCCAGGGAGACGACCCGCG

Downstream 100 bases:

>100_bases
TGATCAAGAGGACTTCAACTATGCGCCGCGCTGCCTTTCTGACTATTGCATTCATGAGCACCCTGACAGCCCATACTGCT
CTCGCCGAAATCCCGGGAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 312; Mature: 312

Protein sequence:

>312_residues
MNLRKPRAWAALALSISTWPAAAGTVTSATLVASTLSPDCLEYKVVGICYWLLCTPFGCKVKTSTKVRHFVPDAVVSSYS
NTGENPWIEVSSLSSSTSFAQDGGDGTTNHSNEDSLAKFKNADVIGHPGGATFSKFASASGYACQGAATPYMPYLLSTLD
TVAWRYGVPESVYPEALIPGRREVGGLTSGDMWGSVYPRSGFIHQADDYKAASVIAQRAGDVVTRSGQVHVYQPLLAQPQ
PGYWPAGELIETDATTGKWQELTPTLSQSCAVFPNSQPRVQATDGGYAWALWRPYSCCKREGQTFLGSTDFQ

Sequences:

>Translated_312_residues
MNLRKPRAWAALALSISTWPAAAGTVTSATLVASTLSPDCLEYKVVGICYWLLCTPFGCKVKTSTKVRHFVPDAVVSSYS
NTGENPWIEVSSLSSSTSFAQDGGDGTTNHSNEDSLAKFKNADVIGHPGGATFSKFASASGYACQGAATPYMPYLLSTLD
TVAWRYGVPESVYPEALIPGRREVGGLTSGDMWGSVYPRSGFIHQADDYKAASVIAQRAGDVVTRSGQVHVYQPLLAQPQ
PGYWPAGELIETDATTGKWQELTPTLSQSCAVFPNSQPRVQATDGGYAWALWRPYSCCKREGQTFLGSTDFQ
>Mature_312_residues
MNLRKPRAWAALALSISTWPAAAGTVTSATLVASTLSPDCLEYKVVGICYWLLCTPFGCKVKTSTKVRHFVPDAVVSSYS
NTGENPWIEVSSLSSSTSFAQDGGDGTTNHSNEDSLAKFKNADVIGHPGGATFSKFASASGYACQGAATPYMPYLLSTLD
TVAWRYGVPESVYPEALIPGRREVGGLTSGDMWGSVYPRSGFIHQADDYKAASVIAQRAGDVVTRSGQVHVYQPLLAQPQ
PGYWPAGELIETDATTGKWQELTPTLSQSCAVFPNSQPRVQATDGGYAWALWRPYSCCKREGQTFLGSTDFQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33522; Mature: 33522

Theoretical pI: Translated: 6.65; Mature: 6.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLRKPRAWAALALSISTWPAAAGTVTSATLVASTLSPDCLEYKVVGICYWLLCTPFGCK
CCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCE
VKTSTKVRHFVPDAVVSSYSNTGENPWIEVSSLSSSTSFAQDGGDGTTNHSNEDSLAKFK
EECCCCHHHHCCHHHHHHHCCCCCCCCEEEECCCCCCCHHHCCCCCCCCCCCCHHHHHHC
NADVIGHPGGATFSKFASASGYACQGAATPYMPYLLSTLDTVAWRYGVPESVYPEALIPG
CCCEEECCCCCHHHHHHCCCCCEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHCCCC
RREVGGLTSGDMWGSVYPRSGFIHQADDYKAASVIAQRAGDVVTRSGQVHVYQPLLAQPQ
CHHHCCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHCCCEECCCCEEEECHHHCCCC
PGYWPAGELIETDATTGKWQELTPTLSQSCAVFPNSQPRVQATDGGYAWALWRPYSCCKR
CCCCCCCCEEECCCCCCCHHHCCHHHHCCEEECCCCCCCEEECCCCEEEEECCCHHHHHH
EGQTFLGSTDFQ
CCCEECCCCCCC
>Mature Secondary Structure
MNLRKPRAWAALALSISTWPAAAGTVTSATLVASTLSPDCLEYKVVGICYWLLCTPFGCK
CCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCE
VKTSTKVRHFVPDAVVSSYSNTGENPWIEVSSLSSSTSFAQDGGDGTTNHSNEDSLAKFK
EECCCCHHHHCCHHHHHHHCCCCCCCCEEEECCCCCCCHHHCCCCCCCCCCCCHHHHHHC
NADVIGHPGGATFSKFASASGYACQGAATPYMPYLLSTLDTVAWRYGVPESVYPEALIPG
CCCEEECCCCCHHHHHHCCCCCEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHCCCC
RREVGGLTSGDMWGSVYPRSGFIHQADDYKAASVIAQRAGDVVTRSGQVHVYQPLLAQPQ
CHHHCCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHCCCEECCCCEEEECHHHCCCC
PGYWPAGELIETDATTGKWQELTPTLSQSCAVFPNSQPRVQATDGGYAWALWRPYSCCKR
CCCCCCCCEEECCCCCCCHHHCCHHHHCCEEECCCCCCCEEECCCCEEEEECCCHHHHHH
EGQTFLGSTDFQ
CCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA