Click here to switch to the map view.

The map label for this gene is tolR [H]

Identifier: 66044661

GI number: 66044661

Start: 1598532

End: 1598996

Strand: Direct

Name: tolR [H]

Synonym: Psyr_1413

Alternate gene names: 66044661

Gene position: 1598532-1598996 (Clockwise)

Preceding gene: 66044660

Following gene: 66044662

Centisome position: 26.23

GC content: 55.91

Gene sequence:

>465_bases
ATGGCTTTAATCGCTCGAGATCGTCGCAGAAAACGCAAGCCGGTCGCCGAAATGAACGTAGTGCCCTACATCGACGTGAT
GCTGGTGTTGCTCGTGATTTTCATGGTGACGGCTCCCATGATCAACCAGGGCGTGAAAGTCGACTTGCCCAAGGTCTCCA
GCGAGGCTTTGCCGCAAGACAACAACAATCAGGTCCTGACCATTTCGATCAAGGCTGACAAGACCTATTACTGGAACCTT
GGCAGCGAAGTCGATACCGACAAGCAGATGGACAAGGCAATGACCCTGCCACAGCTGACTGCCGCAGTGACCAAGATCGT
CGCTGCCGGTCGTGACGCAGGCAAGCAGACGCAGGTTTTCATTCGTGGTGACAAGACCGTCGATTACGGCTCGGTCATGG
GCACGATGGGCGGGCTGCAGAAGGCTGGGGTCGGGAATGTTGGCTTGATTACCGAGGCACCCTGA

Upstream 100 bases:

>100_bases
GTGAGACCTTGATCAGCCGTTACTACACGTTTGCTGACGAGTTCCAGGCCATCCTGCACCGTAAAGTGCACACCAGCGAA
GAGTGAGCAGGTAATTCCCC

Downstream 100 bases:

>100_bases
TGCAGCCGATTCGAGAGCCGTCCGCCTCGGAAAGCTACTTCTGGCCCAGTGTCTGGGCCGTGGCATTGCATATTCTGATT
TTCGGCATGCTGTTCGTCAG

Product: biopolymer transport protein ExbD/TolR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 153

Protein sequence:

>154_residues
MALIARDRRRKRKPVAEMNVVPYIDVMLVLLVIFMVTAPMINQGVKVDLPKVSSEALPQDNNNQVLTISIKADKTYYWNL
GSEVDTDKQMDKAMTLPQLTAAVTKIVAAGRDAGKQTQVFIRGDKTVDYGSVMGTMGGLQKAGVGNVGLITEAP

Sequences:

>Translated_154_residues
MALIARDRRRKRKPVAEMNVVPYIDVMLVLLVIFMVTAPMINQGVKVDLPKVSSEALPQDNNNQVLTISIKADKTYYWNL
GSEVDTDKQMDKAMTLPQLTAAVTKIVAAGRDAGKQTQVFIRGDKTVDYGSVMGTMGGLQKAGVGNVGLITEAP
>Mature_153_residues
ALIARDRRRKRKPVAEMNVVPYIDVMLVLLVIFMVTAPMINQGVKVDLPKVSSEALPQDNNNQVLTISIKADKTYYWNLG
SEVDTDKQMDKAMTLPQLTAAVTKIVAAGRDAGKQTQVFIRGDKTVDYGSVMGTMGGLQKAGVGNVGLITEAP

Specific function: Involved in the tonB-independent uptake of proteins [H]

COG id: COG0848

COG function: function code U; Biopolymer transport protein

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the exbD/tolR family [H]

Homologues:

Organism=Escherichia coli, GI1789380, Length=152, Percent_Identity=36.1842105263158, Blast_Score=90, Evalue=8e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014168
- InterPro:   IPR003400 [H]

Pfam domain/function: PF02472 ExbD [H]

EC number: NA

Molecular weight: Translated: 16737; Mature: 16606

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALIARDRRRKRKPVAEMNVVPYIDVMLVLLVIFMVTAPMINQGVKVDLPKVSSEALPQD
CCCCCCHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCC
NNNQVLTISIKADKTYYWNLGSEVDTDKQMDKAMTLPQLTAAVTKIVAAGRDAGKQTQVF
CCCEEEEEEEEECCEEEEECCCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCEEEE
IRGDKTVDYGSVMGTMGGLQKAGVGNVGLITEAP
EECCCCCCHHHHHHHHCCCCCCCCCCCCEEECCC
>Mature Secondary Structure 
ALIARDRRRKRKPVAEMNVVPYIDVMLVLLVIFMVTAPMINQGVKVDLPKVSSEALPQD
CCCCCHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCC
NNNQVLTISIKADKTYYWNLGSEVDTDKQMDKAMTLPQLTAAVTKIVAAGRDAGKQTQVF
CCCEEEEEEEEECCEEEEECCCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCEEEE
IRGDKTVDYGSVMGTMGGLQKAGVGNVGLITEAP
EECCCCCCHHHHHHHHCCCCCCCCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8955385; 10984043 [H]