Definition Pseudomonas syringae pv. syringae B728a, complete genome.
Accession NC_007005
Length 6,093,698

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The map label for this gene is slyX [H]

Identifier: 66044650

GI number: 66044650

Start: 1589390

End: 1589596

Strand: Direct

Name: slyX [H]

Synonym: Psyr_1402

Alternate gene names: 66044650

Gene position: 1589390-1589596 (Clockwise)

Preceding gene: 66044649

Following gene: 66044652

Centisome position: 26.08

GC content: 55.07

Gene sequence:

>207_bases
ATGAGCCTTGAAGAGCGAGTCATGGAGCTTGAAAGCCGTATGGCCTTTCAGGATGATACGATCCAGGCGCTCAATGACGT
GCTGGTAAAGCAGCGGCGCGAGCTTGATCATCTGCAACTGCAGATGGCGGCGATGCTCAAGCGTCAGGAGGAAATGGGCA
GTCAGTTCGAGACCTTCGAGGAAGATGCGCCGCCACCTCACTATTGA

Upstream 100 bases:

>100_bases
AGCAGGCTGCCATCGCTTATACTGACGAACAGTTCTCGGCAATCCGCCAGCAACTGAAGCCGGTACTGACAAATGATTTC
CGATTTGAGGAGGAGCAATC

Downstream 100 bases:

>100_bases
TCGGCTGCCATAAAAAAACCGCGACTTCCGTCAGGAGGTCGCGGTTTTTTGTTGCTTGAAACAATCAGCGGCGGGGCAGG
GCTGCAATGACATCTTCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 68; Mature: 67

Protein sequence:

>68_residues
MSLEERVMELESRMAFQDDTIQALNDVLVKQRRELDHLQLQMAAMLKRQEEMGSQFETFEEDAPPPHY

Sequences:

>Translated_68_residues
MSLEERVMELESRMAFQDDTIQALNDVLVKQRRELDHLQLQMAAMLKRQEEMGSQFETFEEDAPPPHY
>Mature_67_residues
SLEERVMELESRMAFQDDTIQALNDVLVKQRRELDHLQLQMAAMLKRQEEMGSQFETFEEDAPPPHY

Specific function: Unknown

COG id: COG2900

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the slyX family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007236 [H]

Pfam domain/function: PF04102 SlyX [H]

EC number: NA

Molecular weight: Translated: 8082; Mature: 7951

Theoretical pI: Translated: 4.23; Mature: 4.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
8.8 %Met     (Translated Protein)
8.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
7.5 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLEERVMELESRMAFQDDTIQALNDVLVKQRRELDHLQLQMAAMLKRQEEMGSQFETFE
CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EDAPPPHY
CCCCCCCC
>Mature Secondary Structure 
SLEERVMELESRMAFQDDTIQALNDVLVKQRRELDHLQLQMAAMLKRQEEMGSQFETFE
CHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EDAPPPHY
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA