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The map label for this gene is ygdH [C]

Identifier: 66044628

GI number: 66044628

Start: 1564031

End: 1565143

Strand: Reverse

Name: ygdH [C]

Synonym: Psyr_1380

Alternate gene names: 66044628

Gene position: 1565143-1564031 (Counterclockwise)

Preceding gene: 66044629

Following gene: 66044624

Centisome position: 25.68

GC content: 56.69

Gene sequence:

>1113_bases
ATGCCGTATGTACCTGACGATCTTCTATCCCGACACTTTCAAAGCGACGGTCTCGACCTGACCAGCAAGATTGAAGAGCA
CATCAATGAGGTGGCTCCGGGCACGAAAAACCTTCCGCTGTACCGCGACATGATGCTCACCGTGTTGCGCATGGCCCAGG
ATGACCGTAACCGCTGGGACGTCAAGATAACGCTGCAGACCCTGCGCGAACTGGACAAAGCCTTTCGGGTGCTAGAGCGC
TTCAAGGGCCGCCGCAAAGTCACTGTCTTCGGCTCCGCTCGTACACCAATGGAACATCCGCTGTACGCCCAGGCCAGAGA
GCTGGGAGAAAAACTGGCCAGCTCCAACATGATGGTCATCACCGGCGCAGGCGGCGGCATCATGGCGGCAGCCCATGCCG
GTGCAGGCTTGAAACACAGCCTCGGGTTCAACATTACCCTGCCCTTCGAACAGCACGCCAACCCGACGGTAGAGGGCAGC
GAAAACCTGCTGCCCTTCCACTTCTTCTTCACGCGCAAGCTGTTCTTCGTCAAGGAAGCCGACGCGCTGGTGCTATGCCC
AGGCGGCTTCGGAACTCTGGACGAAGCCCTGGAAGTGCTGACGTTGATACAAACCGGCAAAAGCCCGTTGGTGCCTGTGG
TATTGCTGGACACGCCTGGCGGGAGTTTCTGGCAAGGTGCGCTGGACTTCATCAAGCACCAGTTGCAGGACAATCACTAC
ATTCTGCCAGCCGACATGAAGCTGATGAGGCTGGTTTACAGCGCCGACGAAGCGGTGCAAGAGATCAACCGGTTTTACGC
CAACTTCCATTCCAGCCGCTGGCTGAAAAACAAGTTCGTGATCCGTATGCATCATGCGCTGAGCGAGCAAGCTCTGGAGC
ACATGCAGGAAGCGTTCGCTGACTTGTGCATCAATGAAAACTTTCACCAGCACAGTTATCAGGGCGAAGAACACGATGAA
GCGCAGTTCAGTCACCTGACACGACTGGCGTTCACCTTCACAGGCCGCAATCAGGGCAGGCTTCGTGAACTGGTGGATTA
CATCAACCAACAGGAAAACTGGGAAGACGCTTCAGCGACCAGGGACGCAGCTCAGAAACGGGCGCCACAGTAA

Upstream 100 bases:

>100_bases
GCAATGAACAGGGAATGGGTAGCCTTTCTCTGCAAACCGGGACATCATCGATTCAACACGCCCCACCGGGCCATCGATCC
TGCAGGAGGAAAAATCCCGA

Downstream 100 bases:

>100_bases
ACGCCCCGATATATCAGTCATCTCCGCCACGGCCGCTTAACAAGCGGCCGATCATTTCCAGCGGATAGCCTCGATAACTC
AAAAAACGCCCCTGTTTGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 370; Mature: 369

Protein sequence:

>370_residues
MPYVPDDLLSRHFQSDGLDLTSKIEEHINEVAPGTKNLPLYRDMMLTVLRMAQDDRNRWDVKITLQTLRELDKAFRVLER
FKGRRKVTVFGSARTPMEHPLYAQARELGEKLASSNMMVITGAGGGIMAAAHAGAGLKHSLGFNITLPFEQHANPTVEGS
ENLLPFHFFFTRKLFFVKEADALVLCPGGFGTLDEALEVLTLIQTGKSPLVPVVLLDTPGGSFWQGALDFIKHQLQDNHY
ILPADMKLMRLVYSADEAVQEINRFYANFHSSRWLKNKFVIRMHHALSEQALEHMQEAFADLCINENFHQHSYQGEEHDE
AQFSHLTRLAFTFTGRNQGRLRELVDYINQQENWEDASATRDAAQKRAPQ

Sequences:

>Translated_370_residues
MPYVPDDLLSRHFQSDGLDLTSKIEEHINEVAPGTKNLPLYRDMMLTVLRMAQDDRNRWDVKITLQTLRELDKAFRVLER
FKGRRKVTVFGSARTPMEHPLYAQARELGEKLASSNMMVITGAGGGIMAAAHAGAGLKHSLGFNITLPFEQHANPTVEGS
ENLLPFHFFFTRKLFFVKEADALVLCPGGFGTLDEALEVLTLIQTGKSPLVPVVLLDTPGGSFWQGALDFIKHQLQDNHY
ILPADMKLMRLVYSADEAVQEINRFYANFHSSRWLKNKFVIRMHHALSEQALEHMQEAFADLCINENFHQHSYQGEEHDE
AQFSHLTRLAFTFTGRNQGRLRELVDYINQQENWEDASATRDAAQKRAPQ
>Mature_369_residues
PYVPDDLLSRHFQSDGLDLTSKIEEHINEVAPGTKNLPLYRDMMLTVLRMAQDDRNRWDVKITLQTLRELDKAFRVLERF
KGRRKVTVFGSARTPMEHPLYAQARELGEKLASSNMMVITGAGGGIMAAAHAGAGLKHSLGFNITLPFEQHANPTVEGSE
NLLPFHFFFTRKLFFVKEADALVLCPGGFGTLDEALEVLTLIQTGKSPLVPVVLLDTPGGSFWQGALDFIKHQLQDNHYI
LPADMKLMRLVYSADEAVQEINRFYANFHSSRWLKNKFVIRMHHALSEQALEHMQEAFADLCINENFHQHSYQGEEHDEA
QFSHLTRLAFTFTGRNQGRLRELVDYINQQENWEDASATRDAAQKRAPQ

Specific function: Unknown

COG id: COG1611

COG function: function code R; Predicted Rossmann fold nucleotide-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42107; Mature: 41976

Theoretical pI: Translated: 6.56; Mature: 6.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPYVPDDLLSRHFQSDGLDLTSKIEEHINEVAPGTKNLPLYRDMMLTVLRMAQDDRNRWD
CCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCEE
VKITLQTLRELDKAFRVLERFKGRRKVTVFGSARTPMEHPLYAQARELGEKLASSNMMVI
EEEEHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCEEEE
TGAGGGIMAAAHAGAGLKHSLGFNITLPFEQHANPTVEGSENLLPFHFFFTRKLFFVKEA
EECCCCEEHHHHCCCCCCCCCCCEEEECHHHCCCCCCCCCCCCCCHHHHHHHHHHEEECC
DALVLCPGGFGTLDEALEVLTLIQTGKSPLVPVVLLDTPGGSFWQGALDFIKHQLQDNHY
CEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCE
ILPADMKLMRLVYSADEAVQEINRFYANFHSSRWLKNKFVIRMHHALSEQALEHMQEAFA
ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DLCINENFHQHSYQGEEHDEAQFSHLTRLAFTFTGRNQGRLRELVDYINQQENWEDASAT
HHHHCCCCHHCCCCCCCCHHHHHHHHHHHHEEECCCCCHHHHHHHHHHCCCCCCCHHHHH
RDAAQKRAPQ
HHHHHHCCCC
>Mature Secondary Structure 
PYVPDDLLSRHFQSDGLDLTSKIEEHINEVAPGTKNLPLYRDMMLTVLRMAQDDRNRWD
CCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCEE
VKITLQTLRELDKAFRVLERFKGRRKVTVFGSARTPMEHPLYAQARELGEKLASSNMMVI
EEEEHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCEEEE
TGAGGGIMAAAHAGAGLKHSLGFNITLPFEQHANPTVEGSENLLPFHFFFTRKLFFVKEA
EECCCCEEHHHHCCCCCCCCCCCEEEECHHHCCCCCCCCCCCCCCHHHHHHHHHHEEECC
DALVLCPGGFGTLDEALEVLTLIQTGKSPLVPVVLLDTPGGSFWQGALDFIKHQLQDNHY
CEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCE
ILPADMKLMRLVYSADEAVQEINRFYANFHSSRWLKNKFVIRMHHALSEQALEHMQEAFA
ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DLCINENFHQHSYQGEEHDEAQFSHLTRLAFTFTGRNQGRLRELVDYINQQENWEDASAT
HHHHCCCCHHCCCCCCCCHHHHHHHHHHHHEEECCCCCHHHHHHHHHHCCCCCCCHHHHH
RDAAQKRAPQ
HHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA